CV712201
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSJ (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. japonica GN=CSLH2 PE=2 SV=3) HSP 1 Score: 91.6633 bits (226), Expect = 5.495e-18 Identity = 44/98 (44.90%), Postives = 63/98 (64.29%), Query Frame = -2 Query: 352 DLPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPT--EKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYFQSISEPHEAEEA 639 +LP +D+ V TADP E P++ +NTVLS++A DYP E+L+ Y+SDD T +AL EA+ FA W+P+C+++ V R+P YF S S P A Sbjct: 133 ELPAVDMLVTTADPALEPPLVTVNTVLSLLALDYPRAGERLACYVSDDGCSPLTCHALREAAGFAAAWVPFCRRYGVAVRAPFRYFSSSSSPESGGPA 230
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSI (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. indica GN=CSLH2 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.495e-18 Identity = 44/98 (44.90%), Postives = 63/98 (64.29%), Query Frame = -2 Query: 352 DLPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPT--EKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYFQSISEPHEAEEA 639 +LP +D+ V TADP E P++ +NTVLS++A DYP E+L+ Y+SDD T +AL EA+ FA W+P+C+++ V R+P YF S S P A Sbjct: 133 ELPAVDMLVTTADPALEPPLVTVNTVLSLLALDYPRAGERLACYVSDDGCSPLTCHALREAAGFAAAWVPFCRRYGVAVRAPFRYFSSSSSPESGGPA 230
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CSLF4_ORYSJ (Mixed-linked glucan synthase 4 OS=Oryza sativa subsp. japonica GN=CSLF4 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.495e-18 Identity = 37/84 (44.05%), Postives = 60/84 (71.43%), Query Frame = -2 Query: 388 DLPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYF 639 +LPG+D+FV T DP E + +N++LS++A DYP ++ + YLSDD + A++E ++FA+ W+P+C+K VEPR+P +YF Sbjct: 174 ELPGVDVFVTTVDPVDEPILYTVNSILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRAPESYF 257
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CESAB_ORYSJ (Putative cellulose synthase A catalytic subunit 11 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA11 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.652e-17 Identity = 45/105 (42.86%), Postives = 61/105 (58.10%), Query Frame = -2 Query: 388 ARKQIYIFFFICRYEND-----LPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYF 687 A + Y+ RYE L G+D+FV AD E P+ NTVLSV+A DYP ++ Y+ DD A F +L EA+ FA+ WIP+C++ VEPR+P YF Sbjct: 102 ANRVTYLDRLASRYEKGGEASRLAGVDVFVAAADAAREPPLATANTVLSVLAADYPAGGVACYVHDDGADMLVFESLFEAAGFARRWIPFCRRHGVEPRAPELYF 206 The following BLAST results are available for this feature:
BLAST of CV712201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712201 ID=CV712201; Name=CV712201; organism=Citrus sinensis; type=EST; length=823bpback to top |