CV712190
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712190 vs. ExPASy Swiss-Prot
Match: ODPB_STAAS (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain MSSA476) GN=pdhB PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.301e-30 Identity = 67/180 (37.22%), Postives = 112/180 (62.22%), Query Frame = -1 Query: 214 HSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEW 750 H+ LE PG+++V S PY+AKGL+ ++IRS +PV+ EH+ LY + +E +P+EEY ++ +A + + G ++I+TY M M+AA+ L GY EVID+R+++P D+ TI S++KT R ++V+E R G+GA++ A ++E L+API +++ D P+ W Sbjct: 129 HADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFTQAENVW 308
BLAST of CV712190 vs. ExPASy Swiss-Prot
Match: ODPB_STAAR (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain MRSA252) GN=pdhB PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.301e-30 Identity = 67/180 (37.22%), Postives = 112/180 (62.22%), Query Frame = -1 Query: 214 HSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEW 750 H+ LE PG+++V S PY+AKGL+ ++IRS +PV+ EH+ LY + +E +P+EEY ++ +A + + G ++I+TY M M+AA+ L GY EVID+R+++P D+ TI S++KT R ++V+E R G+GA++ A ++E L+API +++ D P+ W Sbjct: 129 HADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFTQAENVW 308
BLAST of CV712190 vs. ExPASy Swiss-Prot
Match: ODPB_STAAN (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain N315) GN=pdhB PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.301e-30 Identity = 67/180 (37.22%), Postives = 112/180 (62.22%), Query Frame = -1 Query: 214 HSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEW 750 H+ LE PG+++V S PY+AKGL+ ++IRS +PV+ EH+ LY + +E +P+EEY ++ +A + + G ++I+TY M M+AA+ L GY EVID+R+++P D+ TI S++KT R ++V+E R G+GA++ A ++E L+API +++ D P+ W Sbjct: 129 HADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFTQAENVW 308
BLAST of CV712190 vs. ExPASy Swiss-Prot
Match: ODPB_STAAM (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pdhB PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.301e-30 Identity = 67/180 (37.22%), Postives = 112/180 (62.22%), Query Frame = -1 Query: 214 HSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEW 750 H+ LE PG+++V S PY+AKGL+ ++IRS +PV+ EH+ LY + +E +P+EEY ++ +A + + G ++I+TY M M+AA+ L GY EVID+R+++P D+ TI S++KT R ++V+E R G+GA++ A ++E L+API +++ D P+ W Sbjct: 129 HADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFTQAENVW 308
BLAST of CV712190 vs. ExPASy Swiss-Prot
Match: ODPB_STAAC (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain COL) GN=pdhB PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.301e-30 Identity = 67/180 (37.22%), Postives = 112/180 (62.22%), Query Frame = -1 Query: 214 HSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEW 750 H+ LE PG+++V S PY+AKGL+ ++IRS +PV+ EH+ LY + +E +P+EEY ++ +A + + G ++I+TY M M+AA+ L GY EVID+R+++P D+ TI S++KT R ++V+E R G+GA++ A ++E L+API +++ D P+ W Sbjct: 129 HADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFTQAENVW 308
BLAST of CV712190 vs. ExPASy Swiss-Prot
Match: ODPB_BACST (Pyruvate dehydrogenase E1 component subunit beta OS=Bacillus stearothermophilus GN=pdhB PE=1 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 1.301e-30 Identity = 67/180 (37.22%), Postives = 111/180 (61.67%), Query Frame = -1 Query: 214 HSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEW 750 HS LE PG+++V STPY+AKGL+ +AIR +PVI EH+ LY + ++ +P+ EY + +A++ R G+ +TI+ Y M + ++AA L +G EV+D+R+++P D+ TI S++KT R ++V+E R GI A++ A I E L+AP++ +++ D P+A W Sbjct: 129 HSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTVQPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQAESVW 308
BLAST of CV712190 vs. ExPASy Swiss-Prot
Match: ODPB_BACSU (Pyruvate dehydrogenase E1 component subunit beta OS=Bacillus subtilis GN=pdhB PE=3 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.699e-30 Identity = 70/209 (33.49%), Postives = 118/209 (56.46%), Query Frame = -1 Query: 214 RLHYTSGEQFTXXXXXXXXXXXXRQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEW 837 R+ Y SG ++T H+ LE PGI++V STPY+AKGL+ +AIR +PV+ EH+ LY + ++ +P+EEY L +A++ R G ++I+TY M + ++AA L G EV+D+R++ P D+ TI S++KT R ++V+E + GI A++ A I + L+AP++ +++ D P++ W Sbjct: 100 RMRYRSGGRWTSPVTIRSPFGGGVHTPELHADSLEGLVAQQPGIKVVIPSTPYDAKGLLISAIRDNDPVVFLEHMKLYRSFRQEVPEEEYTIELGKADVKREGTDLSIITYGAMVHESLKAADELEKDGISAEVVDLRTVSPLDIDTIIASVEKTGRAIVVQEAQKQAGIAANVVAEINDRAILSLEAPVLRVAAPDTVFPFSQAESVW 308
BLAST of CV712190 vs. ExPASy Swiss-Prot
Match: ODPB_YEAST (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=PDB1 PE=1 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 2.218e-30 Identity = 80/228 (35.09%), Postives = 127/228 (55.70%), Query Frame = -1 Query: 169 RLHYTSGEQFTXXXXXXXXXXXXRQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICNLE---EAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNK-GYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITEN-FHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQL 837 + HY SG +GA+HSQ ++ SIPG++++ + +A+GL+KAAIR NPV+ E+ LLY I +E +A++ R G ++I+TY+R ++AA+ L K G EVI++RS++P D I ++KKT+ ++ VE + G+GA + A + E+ DYLDAPI ++ DVPTPYA LE++ IV AV+++ Sbjct: 135 KTHYMSGGTQKCQMVFRGPNGAAVGVGAQHSQDFSPWYGSIPGLKVLVPYSAEDARGLLKAAIRDPNPVVFLENELLYGESFEISEEALSPEFTLPYKAKIEREGTDISIVTYTRNVQFSLEAAEILQKKYGVSAEVINLRSIRPLDTEAIIKTVKKTNHLITVESTFPSFGVGAEIVAQVMESEAFDYLDAPIQRVTGADVPTPYAKELEDFAFPDTPTIVKAVKEV 362
BLAST of CV712190 vs. ExPASy Swiss-Prot
Match: ODPB_RAT (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus GN=Pdhb PE=1 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 6.455e-30 Identity = 69/202 (34.16%), Postives = 126/202 (62.38%), Query Frame = -1 Query: 172 LGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDE----EYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITEN-FHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQ 762 + A+HSQ +++ PG+++V+ +AKGL+K+AIR +NPV++ E+ L+Y + +P E +++ + +A++ R G H+T++ +SR H ++AA L +G + EVI++R+++P D+ I S+ KT+ ++ VE G+GA + A I E ++LDAP V ++ DVP PYA LE+ ++ Q I+ A+++ Sbjct: 154 VAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDDNPVVMLENELMYGVAFELPTEAQSKDFLIPIGKAKIERQGTHITVVAHSRPVGHCLEAAAVLSKEGIECEVINLRTIRPMDIEAIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKK 355
BLAST of CV712190 vs. ExPASy Swiss-Prot
Match: ODPB_PONAB (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pongo abelii GN=PDHB PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 6.455e-30 Identity = 70/202 (34.65%), Postives = 126/202 (62.38%), Query Frame = -1 Query: 172 LGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDE----EYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITEN-FHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQ 762 + A+HSQ +++ PG+++V+ +AKGL+K+AIR NPV++ E+ L+Y + P E +++ + +A++ R G H+T++++SR H ++AA L +G + EVI++R+++P D+ TI S+ KT+ ++ VE G+GA + A I E ++LDAP V ++ DVP PYA LE+ ++ Q I+ A+++ Sbjct: 154 VAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKK 355 The following BLAST results are available for this feature:
BLAST of CV712190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712190 ID=CV712190; Name=CV712190; organism=Citrus sinensis; type=EST; length=837bpback to top |