CV712190
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712190 vs. ExPASy Swiss-Prot
Match: ODPB_MOUSE (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Mus musculus GN=Pdhb PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 6.455e-30 Identity = 71/202 (35.15%), Postives = 125/202 (61.88%), Query Frame = -1 Query: 172 LGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDE----EYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITEN-FHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQ 762 + A+HSQ +++ PG+++V+ +AKGL+K+AIR NPV++ E+ L+Y + +P E +++ + +A++ R G H+T++ +SR H ++AA L +G + EVI++R+++P D+ I S+ KT+ ++ VE G+GA + A I E ++LDAP V ++ DVP PYA LE+ +V Q I+ AV++ Sbjct: 154 VAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVMLENELMYGVAFELPAEAQSKDFLIPIGKAKIERQGTHITVVAHSRPVGHCLEAAAVLSKEGIECEVINLRTIRPMDIEAIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKVLEDNSVPQVKDIIFAVKK 355
BLAST of CV712190 vs. ExPASy Swiss-Prot
Match: ODPB_HUMAN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Homo sapiens GN=PDHB PE=1 SV=3) HSP 1 Score: 131.339 bits (329), Expect = 6.455e-30 Identity = 70/202 (34.65%), Postives = 126/202 (62.38%), Query Frame = -1 Query: 172 LGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDE----EYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITEN-FHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQ 762 + A+HSQ +++ PG+++V+ +AKGL+K+AIR NPV++ E+ L+Y + P E +++ + +A++ R G H+T++++SR H ++AA L +G + EVI++R+++P D+ TI S+ KT+ ++ VE G+GA + A I E ++LDAP V ++ DVP PYA LE+ ++ Q I+ A+++ Sbjct: 154 VAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKK 355
BLAST of CV712190 vs. ExPASy Swiss-Prot
Match: ODPB_ASCSU (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Ascaris suum PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.101e-29 Identity = 75/227 (33.04%), Postives = 125/227 (55.07%), Query Frame = -1 Query: 172 RLHYTSGEQFTXXXXXXXXXXXXRQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDE----EYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITE-NFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQ 837 + HY S +F + +HSQ ++F PG+++V +A+GL+KAA+R +NPVI E+ +LY +K + E +++ +A++ RPG+ +TI++ S + AA L G D EVI++R ++P D T+ +S+ KT ++ VE G+GA ++A +TE + YLD PI+ ++ DVP PYA LE + QPA +V V++ Sbjct: 130 KAHYMSAGRFHVPIVFRGANGAAVGVAQQHSQDFTAWFMHCPGVKVVVPYDCEDARGLLKAAVRDDNPVICLENEILYGMKFPVSPEAQSPDFVLPFGQAKIQRPGKDITIVSLSIGVDVSLHAADELAKSGIDCEVINLRCVRPLDFQTVKDSVIKTKHLVTVESGWPNCGVGAEISARVTESDAFGYLDGPILRVTGVDVPMPYAQPLETAALPQPADVVKMVKK 356
BLAST of CV712190 vs. ExPASy Swiss-Prot
Match: ODPB_STAES (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pdhB PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.878e-29 Identity = 63/180 (35.00%), Postives = 110/180 (61.11%), Query Frame = -1 Query: 214 HSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEW 750 H+ LE PG+++V S PY+AKGL+ ++I+S +PV+ EH+ LY + +E +P+EEY ++ +A + + G +T+++Y M ++AA+ L GY EVID+R+++P D+ T+ S++KT R ++V+E R G+GA + A + E L+API +++ D P+ W Sbjct: 129 HADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIQSNDPVVYLEHMKLYRSFREEVPEEEYKIDIGKANVKKEGNDITLISYGAMVQESLKAAEELEKDGYSVEVIDLRTVQPIDIDTLVASVEKTGRAVVVQEAQRQAGVGAQVAAELAERAILSLEAPIARVAASDTIYPFTQAENVW 308
BLAST of CV712190 vs. ExPASy Swiss-Prot
Match: ODPB_STAEQ (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pdhB PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.878e-29 Identity = 63/180 (35.00%), Postives = 110/180 (61.11%), Query Frame = -1 Query: 214 HSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEW 750 H+ LE PG+++V S PY+AKGL+ ++I+S +PV+ EH+ LY + +E +P+EEY ++ +A + + G +T+++Y M ++AA+ L GY EVID+R+++P D+ T+ S++KT R ++V+E R G+GA + A + E L+API +++ D P+ W Sbjct: 129 HADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIQSNDPVVYLEHMKLYRSFREEVPEEEYKIDIGKANVKKEGNDITLISYGAMVQESLKAAEELEKDGYSVEVIDLRTVQPIDIDTLVASVEKTGRAVVVQEAQRQAGVGAQVAAELAERAILSLEAPIARVAASDTIYPFTQAENVW 308
BLAST of CV712190 vs. ExPASy Swiss-Prot
Match: ODPB_SCHPO (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Schizosaccharomyces pombe GN=pdb1 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.453e-29 Identity = 74/205 (36.10%), Postives = 125/205 (60.98%), Query Frame = -1 Query: 166 LGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYN----LKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAA-KTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITE-NFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLC 762 + A+HSQ ++ SIPG+++V+ + +A+GL+KAAIR NPV++ E+ +LY + + E+++ A++ RPG+ +TI+ S ++AA K + G + EVI++RS++P D+ TI S+KKT+R++ V++ GIG+ + A I E + DYLDAP+ +S DVP PY+ +E +V A +V A + C Sbjct: 159 VAAQHSQHFAPWYGSIPGLKVVSPYSAEDARGLLKAAIRDPNPVVVLENEILYGKTFPISKEALSEDFVLPFGLAKVERPGKDITIVGESISVVTALEAADKLKADYGVEAEVINLRSIRPLDINTIAASVKKTNRIVTVDQAYSQHGIGSEIAAQIMESDAFDYLDAPVERVSMADVPMPYSHPVEAASVPN-ADVVVAAAKKC 362
BLAST of CV712190 vs. ExPASy Swiss-Prot
Match: ODBB_PSEAE (2-oxoisovalerate dehydrogenase subunit beta OS=Pseudomonas aeruginosa GN=bkdA2 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.453e-29 Identity = 86/243 (35.39%), Postives = 121/243 (49.79%), Query Frame = -1 Query: 163 RLHYTSGEQFTXXXXXXXXXXXXRQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYN-----------------LKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQ-PAQIVTAVEQLCQ 837 RL Y S F G HSQ E+ F + G++ V S PY+AKGL+ A I +++PVI E LYN ++PD Y L++A +VRPG +T+LTY M Y AA G D E+ID+RSL P DL TI S+KKT R +I E RT G GA L + + E+ +L+API ++ D P P+A +EW PA++ A +++ + Sbjct: 113 RLRYRSAGDFIVPMTVRMPCGGGIYGGQTHSQSPEAMFTQVCGLRTVMPSNPYDAKGLLIACIENDDPVIFLEPKRLYNGPFDGHHDRPVTPWSKHPASQVPDGYYKVPLDKAAIVRPGAALTVLTYGTMVYVAQAAAD---ETGLDAEIIDLRSLWPLDLETIVASVKKTGRCVIAHEATRTCGFGAELMSLVQEHCFHHLEAPIERVTGWDTPYPHA---QEWAYFPGPARVGAAFKRVME 349
BLAST of CV712190 vs. ExPASy Swiss-Prot
Match: ODBB_PSEPU (2-oxoisovalerate dehydrogenase subunit beta OS=Pseudomonas putida GN=bkdA2 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.203e-29 Identity = 84/243 (34.57%), Postives = 122/243 (50.21%), Query Frame = -1 Query: 163 RLHYTSGEQFTXXXXXXXXXXXXRQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYN-----------------LKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQ-PAQIVTAVEQLCQ 837 RL Y S +F G HSQ E+ F + G++ V S PY+AKGL+ A+I ++PVI E LYN +PD Y L++A + RPG V++LTY Y AA+ G D EVID+RSL P DL TI S+KKT R ++V E RT G GA L + + E+ +L+API ++ D P P+A +EW P+++ A++++ + Sbjct: 102 RLRYRSAGEFIAPLTLRMPCGGGIYGGQTHSQSPEAMFTQVCGLRTVMPSNPYDAKGLLIASIECDDPVIFLEPKRLYNGPFDGHHDRPVTPWSKHPHSAVPDGYYTVPLDKAAITRPGNDVSVLTYGTTVYVAQVAAE---ESGVDAEVIDLRSLWPLDLDTIVESVKKTGRCVVVHEATRTCGFGAELVSLVQEHCFHHLEAPIERVTGWDTPYPHA---QEWAYFPGPSRVGAALKKVME 338
BLAST of CV712190 vs. ExPASy Swiss-Prot
Match: ODBB_DICDI (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Dictyostelium discoideum GN=bkdB PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.998e-27 Identity = 70/176 (39.77%), Postives = 106/176 (60.23%), Query Frame = -1 Query: 238 GAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNK-GYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTP 759 G HSQ ESYF PG+++V STP AKGL+ A+IR ++PVI FE L+Y + E +P +Y L +A +V+ G+ +TI+ + ++QA K G E+ID+R+++P+D+ T+ S+KKT RV+I E +TGG A ++A I E +L+API + D P P Sbjct: 171 GHYHSQSPESYFGHTPGLKVVIPSTPIEAKGLLLASIREKDPVIFFEPKLMYRSAVEEVPIGDYEIPLGKARIVKEGKDITIIGWGAQMRVLLQAVNMAEEKLGISCELIDLRTIQPWDVETVVESVKKTGRVVISHEAPKTGGWAAEISATIQERCFLHLEAPIQRVCGYDTPFP 346
BLAST of CV712190 vs. ExPASy Swiss-Prot
Match: ODPB_ACHLA (Pyruvate dehydrogenase E1 component subunit beta OS=Acholeplasma laidlawii GN=pdhB PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.330e-26 Identity = 72/226 (31.86%), Postives = 119/226 (52.65%), Query Frame = -1 Query: 163 RLHYTSGEQFTXXXXXXXXXXXXRQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNL-KERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLCQ 837 R+ S QFT + HS+ LE F SIPG+++V STPY+AKGL+ AAI +PV+ E +Y K+ +P E Y + +A++V+ G +T++ + + V +A K + +G E+ID+R++ P D TI NS+KKT + ++V E +++ G A L + E +L+A V + D+ P A E + QP +I + +L + Sbjct: 100 RMRNRSRGQFTVPMVLRLPHGGGIRALEHHSEALEVLFGSIPGLKVVTPSTPYDAKGLLLAAINDPDPVVFLEPKRIYRAGKQEVPAEMYEIPIGKAKVVKQGTDMTVVAWGSIVREVEKAVKLVEAEGISVEIIDLRTISPIDEETILNSVKKTGKFMVVTEAVKSYGPAAELITMVNEKAFFHLEAAPVRFTGFDITVPLARG-EHYHFPQPEKIAAYIRKLAK 324 The following BLAST results are available for this feature:
BLAST of CV712190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712190 ID=CV712190; Name=CV712190; organism=Citrus sinensis; type=EST; length=837bpback to top |