CV712190
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712190 vs. ExPASy Swiss-Prot
Match: ODBB_RAT (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Rattus norvegicus GN=Bckdhb PE=1 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 9.028e-24 Identity = 67/204 (32.84%), Postives = 107/204 (52.45%), Query Frame = -1 Query: 235 RLHYTSGEQFTXXXXXXXXXXXXRQLGA-EHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLK-ERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNK-GYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPY 837 + Y SG+ F GA HSQ E++F PGI++V +P+ AKGL+ + I +NP I FE +LY E++P E Y L +AE+++ G VT++ + + + + A K G EVID+R++ P+D+ T+ S+ KT R+LI E TGG + +++ + E L+API + D P P+ Sbjct: 164 KYRYRSGDLFNCGSLTIRAPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFFEPKILYRAAVEQVPVEPYKIPLSQAEVIQEGSDVTLVAWGTQVHVIREVASMAQEKLGVSCEVIDLRTIVPWDVDTVCKSVIKTGRLLISHEAPLTGGFASEISSTVQEECFLNLEAPISRVCGYDTPFPH 367
BLAST of CV712190 vs. ExPASy Swiss-Prot
Match: ODBB_MOUSE (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Mus musculus GN=Bckdhb PE=2 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 9.028e-24 Identity = 67/204 (32.84%), Postives = 107/204 (52.45%), Query Frame = -1 Query: 235 RLHYTSGEQFTXXXXXXXXXXXXRQLGA-EHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLK-ERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNK-GYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPY 837 + Y SG+ F GA HSQ E++F PGI++V +P+ AKGL+ + I +NP I FE +LY E++P E Y L +AE+++ G VT++ + + + + A K G EVID+R++ P+D+ T+ S+ KT R+LI E TGG + +++ + E L+API + D P P+ Sbjct: 164 KYRYRSGDLFNCGSLTIRAPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFFEPKILYRAAVEQVPVEPYKIPLSQAEVIQEGSDVTLVAWGTQVHVIREVASMAQEKLGVSCEVIDLRTIVPWDVDTVCKSVIKTGRLLISHEAPLTGGFASEISSTVQEECFLNLEAPISRVCGYDTPFPH 367
BLAST of CV712190 vs. ExPASy Swiss-Prot
Match: ODBB_HUMAN (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Homo sapiens GN=BCKDHB PE=1 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 1.179e-23 Identity = 68/204 (33.33%), Postives = 106/204 (51.96%), Query Frame = -1 Query: 235 RLHYTSGEQFTXXXXXXXXXXXXRQLGA-EHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLK-ERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNK-GYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPY 837 + Y SG+ F GA HSQ E++F PGI++V +P+ AKGL+ + I +NP I FE +LY E +P E Y L +AE+++ G VT++ + + + + A K G EVID+R++ P+D+ TI S+ KT R+LI E TGG + +++ + E L+API + D P P+ Sbjct: 166 KYRYRSGDLFNCGSLTIRSPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFFEPKILYRAAAEEVPIEPYNIPLSQAEVIQEGSDVTLVAWGTQVHVIREVASMAKEKLGVSCEVIDLRTIIPWDVDTICKSVIKTGRLLISHEAPLTGGFASEISSTVQEECFLNLEAPISRVCGYDTPFPH 369
BLAST of CV712190 vs. ExPASy Swiss-Prot
Match: ODBB_BOVIN (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Bos taurus GN=BCKDHB PE=1 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 1.179e-23 Identity = 66/204 (32.35%), Postives = 107/204 (52.45%), Query Frame = -1 Query: 235 RLHYTSGEQFTXXXXXXXXXXXXRQLGA-EHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLK-ERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNK-GYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPY 837 + Y SG+ F GA HSQ E++F PGI++V +P+ AKGL+ + I +NP I FE +LY E++P E Y L +AE+++ G VT++ + + + + A K G EVID+R++ P+D+ T+ S+ KT R+L+ E TGG + +++ + E L+API + D P P+ Sbjct: 166 KYRYRSGDLFNCGSLTIRSPWGCVGHGALYHSQSPEAFFAHCPGIKVVVPRSPFQAKGLLLSCIEDKNPCIFFEPKILYRAAVEQVPVEPYNIPLSQAEVIQEGSDVTLVAWGTQVHVIREVAAMAQEKLGVSCEVIDLRTILPWDVDTVCKSVIKTGRLLVSHEAPLTGGFASEISSTVQEECFLNLEAPISRVCGYDTPFPH 369
BLAST of CV712190 vs. ExPASy Swiss-Prot
Match: ODPB_MYCGE (Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma genitalium GN=pdhB PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.540e-23 Identity = 64/195 (32.82%), Postives = 107/195 (54.87%), Query Frame = -1 Query: 169 HSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYN-LKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQL 750 HS+ LE+ + I G++ V S PY+ KGL AAI S +PVI FE LY ++ IP + Y + EA ++ G +TI++Y + ++ + K E+ID+R++ P+D T+ NS+KKT R+L+V E +++ A + ++TE YL ++ D+ P A E++ A+++ AV QL Sbjct: 131 HSETLEAIYAQIAGLKTVMPSNPYDTKGLFLAAIESPDPVIFFEPKKLYRAFRQEIPSDYYTVPIGEANLISEGSELTIVSYGPTMFDLINLVYSGELKDKGIELIDLRTISPWDKQTVFNSVKKTGRLLVVTEAVKSFTTSAEIITSVTEELFTYLKKAPQRVTGFDIVVPLARG-EKYQFEINARVIDAVNQL 324
BLAST of CV712190 vs. ExPASy Swiss-Prot
Match: ODPB_MYCPN (Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma pneumoniae GN=pdhB PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.480e-23 Identity = 64/195 (32.82%), Postives = 106/195 (54.36%), Query Frame = -1 Query: 169 HSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYN-LKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQL 750 HS+ LE+ + I G++ V S PY+ KGL AA+ S +PV+ FE LY ++ IP + Y + +A ++ G ++TI++Y + ++ K E+ID+R++ P+D T+ NS+KKT R+L+V E +T + A++TE YL A ++ D+ P A E + A+I+ AV QL Sbjct: 132 HSETLEAIYGQIAGLKTVMPSNPYDTKGLFLAAVESPDPVVFFEPKKLYRAFRQEIPADYYTVPIGQANLISQGNNLTIVSYGPTMFDLINMVYGGELKDKGIELIDLRTISPWDKETVFNSVKKTGRLLVVTEAAKTFTTSGEIIASVTEELFSYLKAAPQRVTGWDIVVPLARG-EHYQFNLNARILEAVNQL 325
BLAST of CV712190 vs. ExPASy Swiss-Prot
Match: ODPB_LEIXX (Pyruvate dehydrogenase E1 component subunit beta OS=Leifsonia xyli subsp. xyli GN=pdhB PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.033e-19 Identity = 55/173 (31.79%), Postives = 96/173 (55.49%), Query Frame = -1 Query: 232 HSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYA 750 H + E+YF G+++VA STP++A +++ AI S++PVI FE + Y K + E L + +VR G TI+ ++ M ++AA+ +G EV+D+RSL P D + S++KT R+++ +E +G+ + A + E L+AP++ ++ D P P A Sbjct: 142 HQEAPEAYFAHTAGLRIVAPSTPHDAYWMIQEAIASDDPVIFFEPMSRYWPKGEVDTLENPLPLHASRIVRSGTDATIVAWAGMVPVALRAAEIAAEEGRSLEVVDLRSLAPIDYAPVLRSVQKTGRLVVAQEAPGIVSVGSEVAAVVGEKAFYSLEAPVLRVAGFDTPFPPA 314 The following BLAST results are available for this feature:
BLAST of CV712190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712190 ID=CV712190; Name=CV712190; organism=Citrus sinensis; type=EST; length=837bpback to top |