CV712184

Overview
NameCV712184
Unique NameCV712184
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_DROPE (Eukaryotic translation initiation factor 3 subunit K OS=Drosophila persimilis GN=GL10802 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.127e-24
Identity = 70/208 (33.65%), Postives = 110/208 (52.88%), Query Frame = -1
Query:  198 EQLVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRHFWDEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGWILEGDQSTSQLIVLPPNEFNHPELK-KNVADSIPLEHI 818
            E L  +  YNPD L  LE Y+ +Q  + TY L+ANL +L+LYQF P  ++ +I   IL+K+L  +P  DF +   L+  +   ++  +T+I L+  LE   F  FW  A  +R +   + GF  +I+ F  HV+S+T+Q I + +L E   L G   D  LE      GW  +G      LIV+   +    ++K KN+ + I  E++
Sbjct:   17 EMLGCIERYNPDHLKTLEAYIQDQAKNNTYDLEANLAVLKLYQFNPHMLNFEITYTILLKSLTNLPHTDFVMAKCLLLPQQMKDENIQTIIDLADILERADFTLFWQRAEVNRTMFRHISGFHDSIRKFVSHVVSITFQTIKKDLLKE---LLGGIEDSTLESWIKRNGWKHQG----QDLIVVAMQD---DKIKTKNITEKIEFENV 214          
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_DROER (Eukaryotic translation initiation factor 3 subunit K OS=Drosophila erecta GN=GG22131 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.922e-24
Identity = 64/174 (36.78%), Postives = 94/174 (54.02%), Query Frame = -1
Query:  297 EQLVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRHFWDEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGWILEG 818
            E L  +  YNPD L  LE YV +Q  + TY L+ANL +L+LYQF P  ++  I   IL+K+L ++P  DF +   L+  +   ++  +T+I L+  LE   F  FW  A  +RN+   + GF  +I+ F  HV+S T+Q I + +L E   L G   D  LE      GW  +G
Sbjct:   17 EMLGCIERYNPDHLKTLEAYVQDQAKNNTYDLEANLAVLKLYQFNPHMLNIDITYTILLKSLTSLPHTDFVMAKCLLLPQQMKDENVQTIIDLADILERADFTLFWQRAEVNRNMFRHIAGFHDSIRKFVSHVVSTTFQTIRKDLLKE---LLGGIEDSTLESWIKRNGWKHQG 187          
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_DROSE (Eukaryotic translation initiation factor 3 subunit K OS=Drosophila sechellia GN=GM15855 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.278e-24
Identity = 63/174 (36.21%), Postives = 94/174 (54.02%), Query Frame = -1
Query:  297 EQLVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRHFWDEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGWILEG 818
            E L  +  YNPD L  LE+YV +Q  + TY L+ANL +L+LYQF P  ++  I   IL+K+L ++P  DF +   L+  +   ++  +T+I L+  LE   F  FW  A  +RN+   + GF  +I+ F  HV+  T+Q I + +L E   L G   D  LE      GW  +G
Sbjct:   17 EMLGCIERYNPDHLKTLESYVQDQAKNNTYDLEANLAVLKLYQFNPHMLNFDITYTILLKSLTSLPHTDFVMAKCLLLPQQMKDENVQTIIDLADILERADFTLFWQRAEVNRNMFRHIAGFHDSIRKFVSHVVGTTFQTIRKDLLKE---LLGGIEDSTLESWIKRNGWKNQG 187          
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_DROME (Eukaryotic translation initiation factor 3 subunit K OS=Drosophila melanogaster GN=CG10306 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.278e-24
Identity = 63/174 (36.21%), Postives = 94/174 (54.02%), Query Frame = -1
Query:  297 EQLVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRHFWDEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGWILEG 818
            E L  +  YNPD L  LE+YV +Q  + TY L+ANL +L+LYQF P  ++  I   IL+K+L ++P  DF +   L+  +   ++  +T+I L+  LE   F  FW  A  +RN+   + GF  +I+ F  HV+  T+Q I + +L E   L G   D  LE      GW  +G
Sbjct:   17 EMLGCIERYNPDHLKTLESYVQDQAKNNTYDLEANLAVLKLYQFNPHMLNFDITYTILLKSLTSLPHTDFVMAKCLLLPQQMKDENVQTIIDLADILERADFTLFWQRAEVNRNMFRHITGFHDSIRKFVSHVVGTTFQTIRKDLLKE---LLGGIEDSTLESWIKRNGWKNQG 187          
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_DROAN (Eukaryotic translation initiation factor 3 subunit K OS=Drosophila ananassae GN=GF13261 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.281e-24
Identity = 70/208 (33.65%), Postives = 107/208 (51.44%), Query Frame = -1
Query:  198 EQLVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRHFWDEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGWILEGDQSTSQLIVLPPNEFNHPELK-KNVADSIPLEHI 818
            E L  +  YNPD L  LE YV +Q  + TY L+ANL +L+LYQF P  ++  I   IL+K L  +P  DF +   L+  +   ++  +T+I L+  LE   F  FW  A  +RN+   + GF  +I+ F  HV+  T+Q I + +L E   L G   D  LE      GW  +G      L+V+   +    ++K KN+ + I  E++
Sbjct:   17 EMLGCIERYNPDHLKTLEAYVQDQAKNNTYDLEANLAVLKLYQFNPHMLNFDITYTILLKCLTNLPHTDFVMAKCLLLPQQMKDENVQTIIDLADILERADFTLFWQRAEVNRNMFRHITGFHDSIRKFVSHVIGTTFQTIRKDLLKE---LLGGIEDSTLESWVKRNGWKHQG----QGLVVVATQD---DKIKTKNITEKIEFENV 214          
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_DROMO (Eukaryotic translation initiation factor 3 subunit K OS=Drosophila mojavensis GN=GI20605 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.592e-24
Identity = 69/208 (33.17%), Postives = 108/208 (51.92%), Query Frame = -1
Query:  198 EQLVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRHFWDEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGWILEGDQSTSQLIVLPPNEFNHPELK-KNVADSIPLEHI 818
            E L  +  YNPD L  LE+YV +Q  + TY L+ANL +L+LYQF P  ++  I   IL+K L  +P  DF +   L+  +   ++  +T+I L+  LE   F  FW  A  +R +   + GF  +I+ F  HV+ +T+Q I + +L E   L G   D  LE      GW  +G      L+V+   +    ++K KN+ + I  E++
Sbjct:   17 EMLGCIERYNPDHLKILESYVQDQAKNNTYDLEANLAVLKLYQFNPHMLNFDITYTILLKCLTNLPHTDFVMAKCLLLPQQMKDENVQTIIDLADILERADFTLFWQRAEVNRTMFRHISGFHDSIRKFVSHVVGITFQTIKKDLLKE---LLGGIEDSTLESWIKRNGWKHQG----QDLVVVATQD---DKIKTKNITEKIEFENV 214          
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_DROVI (Eukaryotic translation initiation factor 3 subunit K OS=Drosophila virilis GN=GJ21045 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.538e-24
Identity = 69/208 (33.17%), Postives = 108/208 (51.92%), Query Frame = -1
Query:  198 EQLVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRHFWDEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGWILEGDQSTSQLIVLPPNEFNHPELK-KNVADSIPLEHI 818
            E L  +  YNPD L  LE+YV +Q  + TY L+ANL +L+LYQF P  ++  I   IL+K L  +P  DF +   L+  +   ++  +T+I L+  LE   F  FW  A  +R +   + GF  +I+ F  HV+  T+Q I + +L E   L G   D  LE+     GW  +G      L+V+   +    ++K KN+ + I  E++
Sbjct:   17 EMLGCIERYNPDHLKILESYVQDQAKNNTYDLEANLAVLKLYQFNPHMLNFDITYTILLKCLTNLPHTDFVMAKCLLLPQQMKDENVQTIIDLADILERADFTLFWQRAEVNRTMFRHITGFHDSIRKFVSHVVGTTFQTIKKDLLKE---LLGGIEDSTLENWIKRNGWKHQG----HDLVVVATQD---DKIKTKNITEKIEFENV 214          
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_DROYA (Eukaryotic translation initiation factor 3 subunit K OS=Drosophila yakuba GN=GE12213 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.775e-23
Identity = 62/174 (35.63%), Postives = 93/174 (53.45%), Query Frame = -1
Query:  297 EQLVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRHFWDEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGWILEG 818
            E L  +  YNPD L  LE YV +Q  + TY L+ANL +L+LYQF P  ++  I   IL+K+L ++P  DF +   L+  +   ++  +T+I L+  LE   F  FW  A  +R++   + GF  +I+ F  HV+  T+Q I + +L E   L G   D  LE      GW  +G
Sbjct:   17 EMLGCIERYNPDHLKTLEAYVQDQAKNNTYDLEANLAVLKLYQFNPHMLNFDITYTILLKSLTSLPHTDFVMAKCLLLPQQMKDENVQTIIDLADILERADFTLFWQRAEVNRSMFRHIAGFHDSIRKFVSHVVGTTFQTIRKDLLKE---LLGGIEDSTLESWIKRNGWKHQG 187          
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_DROGR (Eukaryotic translation initiation factor 3 subunit K OS=Drosophila grimshawi GN=GH22679 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.624e-23
Identity = 68/208 (32.69%), Postives = 108/208 (51.92%), Query Frame = -1
Query:  198 EQLVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRHFWDEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGWILEGDQSTSQLIVLPPNEFNHPELK-KNVADSIPLEHI 818
            E L  +  YNPD L  LE+YV +Q  + +Y L+ANL +L+LYQF P  ++  I   IL+K+L  +P  DF +   L+  +   ++  +T+I L+  LE   F  FW  A  +R +   + GF  +I+ F  HV+  T+Q I + +L E   L G   D  LE      GW  +G      L+V+   +    ++K KN+ + I  E++
Sbjct:   17 EMLGCIERYNPDHLKILESYVQDQAKNNSYDLEANLAVLKLYQFNPHMLNFDITYTILLKSLTNLPHTDFVMAKCLLLPQQMKDENVQTIIDLADILERADFTLFWQRAEVNRTMFRHIAGFHDSIRKFVSHVVGTTFQTIKKDLLKE---LLGGIEDSTLESWIKRNGWKHQG----HDLVVVATQD---DKIKTKNITEKIEFENV 214          
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_CULQU (Eukaryotic translation initiation factor 3 subunit K OS=Culex quinquefasciatus GN=CPIJ017839 PE=3 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 3.624e-23
Identity = 60/175 (34.29%), Postives = 89/175 (50.86%), Query Frame = -1
Query:  294 EQLVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRHFWDEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGWILEGD 818
            E L ++  YNP+ L  +E YV +Q     Y L+ANL  L+LYQF P+ M+  +   IL+K+L   P  DF LC  L+      +D  K ++ L+  LE   F  FW    K+    + + GF ++I+ F  HV+ +T+Q I +  L   + L G   DK L       GW  EG+
Sbjct:   17 EMLKSIERYNPEHLKVIEAYVEDQAKDNKYDLEANLACLKLYQFNPQMMNLDVTYTILLKSLTNFPHTDFVLCKCLLLPAQMNDDSVKEIVYLADILEKCDFTLFWSRVQKNPQFFKKITGFSESIRKFVCHVVGITFQSIEKQYL---VRLLGDVDDKVLNAWVKKNGWKEEGE 188          
The following BLAST results are available for this feature:
BLAST of CV712184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
EIF3K_DROPE1.127e-2433.65Eukaryotic translation initiation factor 3 subunit... [more]
EIF3K_DROER1.922e-2436.78Eukaryotic translation initiation factor 3 subunit... [more]
EIF3K_DROSE3.278e-2436.21Eukaryotic translation initiation factor 3 subunit... [more]
EIF3K_DROME3.278e-2436.21Eukaryotic translation initiation factor 3 subunit... [more]
EIF3K_DROAN4.281e-2433.65Eukaryotic translation initiation factor 3 subunit... [more]
EIF3K_DROMO5.592e-2433.17Eukaryotic translation initiation factor 3 subunit... [more]
EIF3K_DROVI9.538e-2433.17Eukaryotic translation initiation factor 3 subunit... [more]
EIF3K_DROYA2.775e-2335.63Eukaryotic translation initiation factor 3 subunit... [more]
EIF3K_DROGR3.624e-2332.69Eukaryotic translation initiation factor 3 subunit... [more]
EIF3K_CULQU3.624e-2334.29Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001A16_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001A16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712184 ID=CV712184; Name=CV712184; organism=Citrus sinensis; type=EST; length=872bp
TTGCAATAATAACATTGGTGTCTCATCAATTCCTCCAAGCCACTTGGGGC
TATGTTTTCAACATAAACACAAAAAGAGATTACAGCAGTCCCCAAAATTC
ACTGCAAGAGTGCTATAGCAGCTGGTTAAAACAAATGAAAATTTACCAAA
TGCCAGGATTTGAACTTCAATCAACCAAGAATGGGAAATATGCGGGTAAT
GTGTTCTAACGGGATGCTATCAGCAACATTCTTCTTCAGCTCGGGATGAT
TAAATTCATTAGGCGGCAGGACAATCAATTGGCTCGTACTTTGATCTCCT
TCAAGAATCCAGCCACAATTGGCCTTCTGGTGTTCAAGGAATTTGTCCAG
AGATAGACCTTTAAGATTGATAGCCTCGGCAAGCACAGTCCTTGGAATCT
TTTGATATGTCAATGAAAGGACATGAATTGCAAAGGACTGAATTGCTTGC
TCAAAACCTGGCACGGCTTCAACTATGTTACGATGCTTAGCTGCTTCATC
CCAGAAATGGCGGAACCTTCCTGTCTCCAAGTAGTGAGAGAGGACAATCA
GCGTCTTGAATTGATCCTCCATTTGCACTCTTTCTGGGATCAAAAAGAGA
CAGAGACTGAAATCTGGAGCTGGCATTGCCATAAGAGCCTTAATTAAAAT
GCGGGCAACAATTTGGGTACTCATTCTTTCTGGTTCAAACTGATAAAGAC
GAAGAAGGCAAAGATTTGCATCCAGACTATATGTTTGTGACAAGACCTGC
TCGTTAACGTAGTTTTCGAGATCGGGAAGGATGTCGGGATTGTAGGGATT
GACGGCGACAAGCTGCTCCACTGTGAATGAAACCTNGTGCTGTTGCTGCT
GTTGAGCCTCTCTTCCCATTTT
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