CV712184

Overview
NameCV712184
Unique NameCV712184
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_DROWI (Eukaryotic translation initiation factor 3 subunit K OS=Drosophila willistoni GN=GK10740 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.055e-22
Identity = 67/208 (32.21%), Postives = 107/208 (51.44%), Query Frame = -1
Query:  198 EQLVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRHFWDEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGWILEGDQSTSQLIVLPPNEFNHPELK-KNVADSIPLEHI 818
            E L  +  YNPD L  LE+YV +Q  + TY L+ANL +L+LYQF P  ++ +I   IL+K L  +P  DF +   L+  +   ++  +T+I L+  LE   F  FW  A  +R +   + GF  +I+ F  HV+  T+Q I + +L E   L G   D  LE       W  +G      L+V+   +    ++K KN+ + I  +++
Sbjct:   17 EMLGCIERYNPDHLKILESYVQDQAKNNTYDLEANLAVLKLYQFNPHMLNFEITYTILLKCLTNLPHTDFVMAKCLLLPQQMKDENVQTIIDLADILERADFTLFWQRAEVNRTMFRHITGFHDSIRKFVSHVVGTTFQTIKKDLLKE---LLGGIEDPTLESWIKRNSWKHQG----QDLVVVATQD---DKIKTKNITEKIEFDNV 214          
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_ANOGA (Eukaryotic translation initiation factor 3 subunit K OS=Anopheles gambiae GN=AGAP011580 PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 1.055e-22
Identity = 64/174 (36.78%), Postives = 87/174 (50.00%), Query Frame = -1
Query:  297 EQLVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRHFWDEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGWILEG 818
            E L ++  YNP+ L  +E YV EQ     Y L+ANL  L+LYQF P  ++  I   IL+KAL   P  DF LC  L+      ++  K +I L+  LE   F  FW   AKH    + + GF  +I+ F  HV+ +T+Q I R  L   + L G   +K L       GW  EG
Sbjct:   17 EMLKSIERYNPEHLKVIEAYVEEQARENQYDLEANLACLKLYQFNPHLLNLDITYIILLKALTNFPHTDFVLCKCLLLPAQMNDETVKEIIYLADILEKCDFSLFWSRLAKHPENYQKISGFHDSIRKFVCHVVGITFQTIERGYL---MQLLGNVEEKVLLSWLKRYGWKEEG 187          
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_BOMMO (Eukaryotic translation initiation factor 3 subunit K OS=Bombyx mori PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.068e-22
Identity = 69/212 (32.55%), Postives = 102/212 (48.11%), Query Frame = -1
Query:  177 LVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRHFWDEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGWILEGDQSTSQLIVLPPNEFNHPELKKNVADSIPLEHITRIFPIL 812
            L ++  YNP  L  LE YV  Q    TY   ANL +L+LYQF PE+ +  I  +IL+KAL   P  DF+LC  L+ E V   +    +  L+  LE   F  F +   +   +   + GF  +I+ F  HV+ +T+Q I +  LA   NL G   D  L+H     GW  +G      LI +   + N     KN+ + I  +H+  +  +L
Sbjct:   17 LKSIERYNPANLEILERYVEMQSRENTYDWGANLAVLKLYQFNPEKFNADITCQILLKALTNFPHTDFTLCKCLLLESVVENETISQIKYLADILEQCDFAQFGNRVHQMPELCSRISGFHDSIRKFVCHVVGITFQTIDKNNLA---NLLGGIDDVTLKHWVKKYGWRDDG-----SLIFIANQDENIK--TKNITEKIEFDHLAPLMALL 218          
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_DICDI (Eukaryotic translation initiation factor 3 subunit K OS=Dictyostelium discoideum GN=eif3k PE=3 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 4.007e-22
Identity = 70/239 (29.29%), Postives = 117/239 (48.95%), Query Frame = -1
Query:  183 REAQQQQQHXVSFTVEQL-----------VAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRHFWDEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKG-LSLDKFLEHQKANCGWILEGDQSTSQLIVLPPNEFNHPELKKNVADSIPLEHITRIFP 863
            ++ QQ++Q  V   +  L           +  + YN  I   LE +++ Q+   TY   AN  LL+LYQF P  ++   +A++L KALM  P  DF    ++IP  +Q E+    L +L+++LET +F+  W     H +    +P F   I++F   VLS+TYQ I  T+L E +NL     L  +++ ++    W +    S S + +   N       K+  AD+   + ++RI P
Sbjct:   17 QQPQQEEQEQVDVDLSSLQGQERIEYINTLIADSYNIAIAKKLEEFLDIQINENTYLFQANSTLLKLYQFNPTHLNKDSIAKMLAKALMNFPCNDFLFLSYMIPSIIQKEEPLLKLFILNNFLETCKFKEAWTHINSH-SFFSEIPSFIDNIRNFISGVLSITYQNISITMLGELLNLSDRTQLVDYIQSKQPT--WKI----SDSTVSLQSDNS------KQKKADTFTFDQLSRILP 242          
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_AEDAE (Eukaryotic translation initiation factor 3 subunit K OS=Aedes aegypti GN=AAEL006115 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.597e-21
Identity = 54/150 (36.00%), Postives = 79/150 (52.67%), Query Frame = -1
Query:  369 EQLVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRHFWDEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAI 818
            + L ++  YNP+ L  +E YV EQ     Y L+ANL  L+LYQF P+ M+  +   IL+KAL   P  DF LC  L+      +D  K +I L+  LE   F  FW   AK+    + + GF  +I+ F  HV+ +T+Q I +  L   +
Sbjct:   17 DMLKSIERYNPEHLKVIEAYVEEQARDNQYDLEANLACLKLYQFNPQLMNLDVTYVILLKALTNFPHTDFVLCKCLLLPAQMNDDTVKEIIYLADILEKCDFTLFWSRVAKNPPFFKKISGFFDSIRKFVCHVVGITFQSIEKQYLVRLL 166          
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_SCLS1 (Eukaryotic translation initiation factor 3 subunit K OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=SS1G_10997 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.751e-20
Identity = 64/228 (28.07%), Postives = 110/228 (48.25%), Query Frame = -1
Query:  189 LVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERV----------------QMEDQFKTLIVLSHYLETGRFRHFW---DEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGWILEGDQSTSQLIVLPPNEFNHPELKKNVA-DSIPLEHITRI 812
            L  ++ YNP+     + YV  Q   +TY   ANL LL+LYQF P     + +  IL+K+L   P+PDFSL L L+P  +                 + +  + L VL+  L +  +  FW   D    + +++  V GFE+ I+      +S + ++IP + L   + + G + +KF+   K  CGW +E        +++P N+ N  E K  V  +++ +E  +R+
Sbjct:   19 LNGLDRYNPETTNIFQEYVTLQCEEKTYDCYANLALLKLYQFNPHLTKDETITNILVKSLTVFPSPDFSLALHLLPPHILTPISSSSALPAAGDAPLSEAVQKLAVLNTLLSSANYSQFWSTLDSDDLYADLIADVSGFEELIRIRIASTISQSVREIPSSELENWLGMNGEAFEKFI---KEVCGWTIENGS-----VIVPLNKEN--EAKGTVVRENVKMEQFSRV 236          
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_BOTFB (Eukaryotic translation initiation factor 3 subunit K OS=Botryotinia fuckeliana (strain B05.10) GN=BC1G_11363 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.147e-19
Identity = 61/228 (26.75%), Postives = 111/228 (48.68%), Query Frame = -1
Query:  189 LVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERV----------------QMEDQFKTLIVLSHYLETGRFRHFW---DEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGWILEGDQSTSQLIVLPPNEFNHPELKKNVA-DSIPLEHITRI 812
            L  ++ YNP+     + YV  Q   +TY   ANL LL+LYQF P     + +  IL+K+L   P+PDFSL L L+P  +                 + +  + L VL+  L +  +  FW   D    + +++  V GFE+ ++      +S + +++  + L   + + G + +KF+   K  CGW +E     + ++++P N+ N  E K  V  +++ +E  +R+
Sbjct:   19 LNGLDRYNPETTNIFQEYVTLQCEEKTYDCYANLALLKLYQFNPHLTKDETITNILVKSLTVFPSPDFSLALHLLPPHILTPISASSSLPAAGDAPLSEAVQKLAVLNTLLSSANYSQFWSTLDSDDLYADLIADVSGFEELVRIRIASTISQSVREVASSELENWLGMNGEAFEKFI---KEVCGWTIE-----NGVVIVPLNKEN--EAKGTVVRENVKMEQFSRV 236          
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_PHANO (Eukaryotic translation initiation factor 3 subunit K OS=Phaeosphaeria nodorum GN=SNOG_15727 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.207e-18
Identity = 66/228 (28.95%), Postives = 111/228 (48.68%), Query Frame = -1
Query:  189 LVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERV----------------QMEDQFKTLIVLSHYLETGRFRHFW---DEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGWILEGDQSTSQLIVLPPNEFNHPELKKNVA-DSIPLEHITRI 812
            L  ++ YNP+     ++YV +Q  SQTY   ANL LL+LYQF P     + V  IL+KAL   P+PDF+L L L+P  +                 + +  + L  L + LE   +  FW   D    + +++  V GFE+ ++      +S   +++ R++L   +NL+G   + F+    + CGW +EG +     I +P N+ N  E K  V  +++  +   R+
Sbjct:   19 LDGLDRYNPETTGVFQDYVMQQCESQTYDCYANLALLKLYQFNPHLSRDETVTNILVKALTMFPSPDFALGLSLLPSHLLAPLNSSAHNPAAGDAPLSEAVQKLNELRNLLEGADYATFWSTLDSDDLYADLIADVSGFEELMRVRIAATVSQAVREVDRSILESWLNLEGSDFEHFV---GSVCGWTIEGAK-----IKVPMNKDN--EAKGTVVRENVKFDQFARV 236          
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_ASPNC (Eukaryotic translation initiation factor 3 subunit K OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=An16g02940 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.688e-18
Identity = 62/210 (29.52%), Postives = 105/210 (50.00%), Query Frame = -1
Query:  249 LVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQ-----------------MEDQFKTLIVLSHYLETGRFRHFWDEAAK---HRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGL-SLDKFLEHQKANCGWILEGDQSTSQLIV-LPPNEFN 812
            L  ++ YNP+     ++YV +Q   +T+   ANL LL+LYQF P  +  + V  +L+KAL   P+P FSLCL L+P   Q                   +  + L  LS  LE+ ++  FW        + ++V  V GFE+ ++      +  T+++IP  VL + ++L+   +L+KF+      C W  E D+S +  ++ +P N+ N
Sbjct:   19 LNGLDRYNPETTTVFQDYVAQQCEDRTFDCYANLALLKLYQFNPHLLQAETVTNVLVKALTVFPSPAFSLCLALLPAHTQPFQASDAEAQAAAQTSDFVESIQKLARLSTLLESAQYTQFWSTLNSDDLYADLVADVAGFEELVRIRIAVEVGKTFREIPAEVLEQWLDLRSREALEKFVAEV---CSW--EVDKSGANTVIKVPTNKEN 223          
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_ASPTN (Eukaryotic translation initiation factor 3 subunit K OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ATEG_01551 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.334e-17
Identity = 64/230 (27.83%), Postives = 110/230 (47.83%), Query Frame = -1
Query:  189 LVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQ-----------------MEDQFKTLIVLSHYLETGRFRHFWDEAAK---HRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGL-SLDKFLEHQKANCGWILEGDQSTSQLIVLPPNEFNHPELKKNV-ADSIPLEHITRI 812
            L  ++ YNP+     ++YV +Q   +T+   ANL LL+LYQF P  +  + V  IL KAL   P+P FSLCL L+P   Q                   +  + L  LS  LE+ ++  FW        + ++V  V GFE+ ++      +  T+++I   VL + ++L+   +L+KF+      C W L+       ++ +P N+ N  E +  V ++ + +E   R+
Sbjct:   19 LNGLDRYNPETTTVFQDYVVQQCEDRTFDCYANLALLKLYQFNPHLLQPETVTNILAKALTVFPSPAFSLCLALLPAHTQPFPATNDEAQAASQTSDFVESVQKLARLSTLLESAQYAQFWSTLNSDDLYADLVADVAGFEELVRIRIAVEVGKTFREITADVLEQWLDLRSREALEKFVVEV---CSWELDKSAPAGTVVKVPTNKEN--EARSEVKSERVGIEQFGRV 243          
The following BLAST results are available for this feature:
BLAST of CV712184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
EIF3K_DROWI1.055e-2232.21Eukaryotic translation initiation factor 3 subunit... [more]
EIF3K_ANOGA1.055e-2236.78Eukaryotic translation initiation factor 3 subunit... [more]
EIF3K_BOMMO3.068e-2232.55Eukaryotic translation initiation factor 3 subunit... [more]
EIF3K_DICDI4.007e-2229.29Eukaryotic translation initiation factor 3 subunit... [more]
EIF3K_AEDAE2.597e-2136.00Eukaryotic translation initiation factor 3 subunit... [more]
EIF3K_SCLS13.751e-2028.07Eukaryotic translation initiation factor 3 subunit... [more]
EIF3K_BOTFB4.147e-1926.75Eukaryotic translation initiation factor 3 subunit... [more]
EIF3K_PHANO1.207e-1828.95Eukaryotic translation initiation factor 3 subunit... [more]
EIF3K_ASPNC2.688e-1829.52Eukaryotic translation initiation factor 3 subunit... [more]
EIF3K_ASPTN1.334e-1727.83Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001A16_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001A16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712184 ID=CV712184; Name=CV712184; organism=Citrus sinensis; type=EST; length=872bp
TTGCAATAATAACATTGGTGTCTCATCAATTCCTCCAAGCCACTTGGGGC
TATGTTTTCAACATAAACACAAAAAGAGATTACAGCAGTCCCCAAAATTC
ACTGCAAGAGTGCTATAGCAGCTGGTTAAAACAAATGAAAATTTACCAAA
TGCCAGGATTTGAACTTCAATCAACCAAGAATGGGAAATATGCGGGTAAT
GTGTTCTAACGGGATGCTATCAGCAACATTCTTCTTCAGCTCGGGATGAT
TAAATTCATTAGGCGGCAGGACAATCAATTGGCTCGTACTTTGATCTCCT
TCAAGAATCCAGCCACAATTGGCCTTCTGGTGTTCAAGGAATTTGTCCAG
AGATAGACCTTTAAGATTGATAGCCTCGGCAAGCACAGTCCTTGGAATCT
TTTGATATGTCAATGAAAGGACATGAATTGCAAAGGACTGAATTGCTTGC
TCAAAACCTGGCACGGCTTCAACTATGTTACGATGCTTAGCTGCTTCATC
CCAGAAATGGCGGAACCTTCCTGTCTCCAAGTAGTGAGAGAGGACAATCA
GCGTCTTGAATTGATCCTCCATTTGCACTCTTTCTGGGATCAAAAAGAGA
CAGAGACTGAAATCTGGAGCTGGCATTGCCATAAGAGCCTTAATTAAAAT
GCGGGCAACAATTTGGGTACTCATTCTTTCTGGTTCAAACTGATAAAGAC
GAAGAAGGCAAAGATTTGCATCCAGACTATATGTTTGTGACAAGACCTGC
TCGTTAACGTAGTTTTCGAGATCGGGAAGGATGTCGGGATTGTAGGGATT
GACGGCGACAAGCTGCTCCACTGTGAATGAAACCTNGTGCTGTTGCTGCT
GTTGAGCCTCTCTTCCCATTTT
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