CV712184

Overview
NameCV712184
Unique NameCV712184
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_ASPCL (Eukaryotic translation initiation factor 3 subunit K OS=Aspergillus clavatus GN=ACLA_037210 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.069e-17
Identity = 61/223 (27.35%), Postives = 103/223 (46.19%), Query Frame = -1
Query:  198 LVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQ--------------MEDQFKTLIVLSHYLETGRFRHFWDEAAK---HRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGL-SLDKFLEHQKANCGWILEGDQSTSQLIVLPPNEFNHPELKKNVADSIPLEHI 812
            L  ++ YNP+     ++YV +Q   +T+   ANL LL+LYQF P  +  +    IL KAL   P+P FSLCL L+P   Q                +  + L  LS  LE+ ++  FW        + ++V  V GFE+ ++      +   +++I   VL +  +L+   +L+KF+      CGW ++       ++ +P N+ N       V   +  EH+
Sbjct:   19 LNGLDRYNPETTTVFQDYVAQQCEDRTFDCYANLALLKLYQFNPHLLQAETATNILAKALTVFPSPAFSLCLALLPAHTQPFPTADADASQTSDFVESVQKLARLSTLLESAQYAQFWSTLNSDDLYADLVADVAGFEELVRIRIAVEVGKAFREINAEVLEQWFDLRSREALEKFVTEV---CGWEVDKAGPNGTVVKVPSNKEN------EVRSEVKSEHV 232          
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_ASPFU (Eukaryotic translation initiation factor 3 subunit K OS=Aspergillus fumigatus GN=AFUA_3G09280 PE=3 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 8.647e-17
Identity = 58/206 (28.16%), Postives = 99/206 (48.06%), Query Frame = -1
Query:  249 LVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQ--------------MEDQFKTLIVLSHYLETGRFRHFWDEAAK---HRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGL-SLDKFLEHQKANCGWILEGDQSTSQLIVLPPNEFN 812
            L  ++ YNP+     ++YV +Q   +T+   ANL LL+LYQF P  +  + V  IL KAL   P+P FSLCL L+P   Q                +  + L  LS  LE+ ++  FW        + ++V  V GFE+ ++      +   +++I   VL + ++L+   +L+KF+      C W ++       ++ +P N+ N
Sbjct:   19 LNGLDRYNPETTTVFQDYVVQQCEERTFDCYANLALLKLYQFNPHLLQPETVTNILAKALTVFPSPAFSLCLALLPAHTQPFPTADTDASQTSDFVESIQKLARLSTLLESAQYAQFWSTLNSDDLYADLVADVAGFEELVRIRIAIEVGKAFREINAEVLEQWLDLRSREALEKFVTEV---CSWEVDKTGPNGTVVKVPTNKEN 221          
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_ASPFC (Eukaryotic translation initiation factor 3 subunit K OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=AFUB_039840 PE=3 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 8.647e-17
Identity = 58/206 (28.16%), Postives = 99/206 (48.06%), Query Frame = -1
Query:  249 LVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQ--------------MEDQFKTLIVLSHYLETGRFRHFWDEAAK---HRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGL-SLDKFLEHQKANCGWILEGDQSTSQLIVLPPNEFN 812
            L  ++ YNP+     ++YV +Q   +T+   ANL LL+LYQF P  +  + V  IL KAL   P+P FSLCL L+P   Q                +  + L  LS  LE+ ++  FW        + ++V  V GFE+ ++      +   +++I   VL + ++L+   +L+KF+      C W ++       ++ +P N+ N
Sbjct:   19 LNGLDRYNPETTTVFQDYVVQQCEERTFDCYANLALLKLYQFNPHLLQPETVTNILAKALTVFPSPAFSLCLALLPAHTQPFPTADTDASQTSDFVESIQKLARLSTLLESAQYAQFWSTLNSDDLYADLVADVAGFEELVRIRIAIEVGKAFREINAEVLEQWLDLRSREALEKFVTEV---CSWEVDKTGPNGTVVKVPTNKEN 221          
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_NEOFI (Eukaryotic translation initiation factor 3 subunit K OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=NFIA_067850 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.129e-16
Identity = 58/206 (28.16%), Postives = 99/206 (48.06%), Query Frame = -1
Query:  249 LVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQ--------------MEDQFKTLIVLSHYLETGRFRHFWDEAAK---HRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGL-SLDKFLEHQKANCGWILEGDQSTSQLIVLPPNEFN 812
            L  ++ YNP+     ++YV +Q   +T+   ANL LL+LYQF P  +  + V  IL KAL   P+P FSLCL L+P   Q                +  + L  LS  LE+ ++  FW        + ++V  V GFE+ ++      +   +++I   VL + ++L+   +L+KF+      C W ++       ++ +P N+ N
Sbjct:   19 LNGLDRYNPETTTVFQDYVVQQCEERTFDCYANLALLKLYQFNPHLLQPETVTNILTKALTVFPSPAFSLCLALLPAHTQPFPTADTDASQSSDFVESIQKLARLSTLLESAQYAQFWSTLNSDDLYADLVADVAGFEELVRIRIAIEVGKAFREINAEVLEQWLDLRSREALEKFVTEV---CSWEVDKAGPNGTVVKVPTNKEN 221          
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_EMENI (Eukaryotic translation initiation factor 3 subunit K OS=Emericella nidulans GN=AN3055 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.475e-16
Identity = 63/209 (30.14%), Postives = 104/209 (49.76%), Query Frame = -1
Query:  249 LVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIP-------------ERVQMED---QFKTLIVLSHYLETGRFRHFWDEAAK---HRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGL-SLDKFLEHQKANCGWILEGDQSTSQLIV-LPPNEFN 812
            L  ++ YNP+     ++YV +Q   +T+   ANL LL+LYQF P  +  + V  IL+KAL   P+P FSLCL L+P                QM D     + L  LS  LE+ ++  FW        + ++V  V GFE+ ++      +   ++++   VL + ++++   +L+KF+      C W  E D+S S  +V +P N+ N
Sbjct:   19 LSGLDRYNPETTTVFQDYVVQQCEDRTFDCYANLALLKLYQFNPHLLQPETVTNILVKALTVFPSPAFSLCLALLPAYTQPFPSSEAEATAAQMSDFVESVQKLARLSSLLESAQYAQFWSTLNSDDLYADLVADVAGFEELVRIRIAVEVGKAFREVNAEVLEQWLDVRNSEALEKFVTEV---CSW--EVDKSGSATVVKVPTNKEN 222          
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_BRUMA (Eukaryotic translation initiation factor 3 subunit K OS=Brugia malayi GN=Bm1_52955 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.926e-16
Identity = 51/188 (27.13%), Postives = 91/188 (48.40%), Query Frame = -1
Query:  306 EQLVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRHFW-----------------DEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGWI 818
            + +  VN YNP+ +  LE+ +   V    Y  D  +  L+LYQ  P++ +  +V  IL+K +M  P  D++L  +LI        + K +  +   LE+  F  FW                  +  +   I++AVPGFE++++++A  V+++T+Q I +++L   + L G   DK +       GWI
Sbjct:   13 QAITGVNRYNPNNVETLESCIEAMVQENQYDKDILVTTLKLYQLNPDKYNESVVKLILLKTMMMAPKSDYALAKYLIDSSRVGSPELKRIFDIGALLESCNFAVFWRLMRGDYRPLDDVNEPFRQPGEIPKIIKAVPGFEESVRNYACQVINVTFQNIEKSLL---VRLLGGVSDKQVNEYARYYGWI 197          
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_ASPOR (Eukaryotic translation initiation factor 3 subunit K OS=Aspergillus oryzae GN=AO090005001305 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.516e-16
Identity = 57/208 (27.40%), Postives = 98/208 (47.12%), Query Frame = -1
Query:  249 LVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQ----------------MEDQFKTLIVLSHYLETGRFRHFWDEAAK---HRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGL-SLDKFLEHQKANCGWILEGDQSTSQLIVLPPNEFN 812
            L  ++ YNP+     ++YV +Q   +T+   ANL LL+LYQF P  +  + V  IL KAL   P+P FSLCL L+P   Q                  +  + L  LS  LE+ ++  FW        + ++   V GFE+ ++      +   +++I   VL + ++L+   +L+KF+      C W ++       ++ +P N+ N
Sbjct:   19 LSGLDRYNPETTTIFQDYVVQQCEDRTFDCYANLALLKLYQFNPHLLQAETVTNILAKALTVFPSPAFSLCLSLLPAHTQPFPSNTEAQAASQTSDFVESVQKLARLSTLLESAQYAQFWSTLNSDDLYADLTADVAGFEELVRIRIAVEVGKAFREINAEVLEQWLDLRSREALEKFVAEV---CSWEVDKSGPNGTVVKVPTNKEN 223          
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_CAEBR (Eukaryotic translation initiation factor 3 subunit K OS=Caenorhabditis briggsae GN=eif-3.K PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.605e-16
Identity = 55/187 (29.41%), Postives = 88/187 (47.06%), Query Frame = -1
Query:  309 EQLVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRHFW-----------------DEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGW 818
            E +  VN YNP+ + +L   V   V    Y  D  L +L+LYQ  PER    +V ++L+K LM +P+ DF+L   LI        + + +  L   LE+  F  FW                    A+   +++ + GFE AI+ +A  V+S+T+Q I + +L+   +L G + DK +       GW
Sbjct:   12 EAIEGVNRYNPENVAELAACVQAMVAENKYDKDIVLTILKLYQLNPERYDENVVRQVLLKTLMVLPSSDFALAKCLIDTNRIGSQELRRIFDLGAVLESCNFAVFWKLMKGTYKPTTNPNEPFKVPAEISKMIKPMAGFEDAIKHYACRVISVTFQNIEKKLLS---SLLGGASDKEVTALAKKFGW 195          
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_USTMA (Eukaryotic translation initiation factor 3 subunit K OS=Ustilago maydis GN=UM04837 PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 7.320e-16
Identity = 72/250 (28.80%), Postives = 110/250 (44.00%), Query Frame = -1
Query:  222 VEQLVA-VNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPER------VQMEDQFKT----------------------------------LIV----LSHYLETGRFRHFWDEAAKH-----RNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGWILEGDQSTSQLIVLPPNEFNHPELKKNVA 821
            +EQL++ V+ YNP  L  L +Y+ +Q+   +Y L ANL +L+LYQF P   +  +V  IL+KAL+A P PDF+LC+ L+ E       V+ E +  T                                  LIV    LS  L   RFR FW   A       R+    +  FE A +  A++ +  ++  I    +A  +NL G  L +F+  Q    GW L     T  +   P NE     +++ ++
Sbjct:   21 IEQLISGVDRYNPQNLDVLHDYLAQQLDDGSYDLLANLAILKLYQFNPADFNYVVVINILLKALVAAPLPDFNLCISLLGEAPLPTVPVKAEKEATTTDADNAGSLSGDDDDDEVVEKPKDVASAGHLTDPLIVRLSQLSTLLFQARFREFWSTLASESYSDVRDYAAKISEFENAARRVALNSVKGSFTSISEKRIANYLNLSGSQLAEFINAQD---GWKLA--DGTVSVPANPDNEIKATVIREEIS 265          
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_MAGGR (Eukaryotic translation initiation factor 3 subunit K OS=Magnaporthe grisea GN=MGG_03855 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.320e-16
Identity = 50/210 (23.81%), Postives = 106/210 (50.48%), Query Frame = -1
Query:  189 YNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFL-----IPERVQMEDQFKTLIVLSHYLETGRFRHFW---DEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGWILEGDQSTSQLIVLPPNEFNHPELKKNVADSIPLEHITRI 794
            YNP+ +  LE Y+  Q   +    +AN  LL+LYQ  P+R+  +++  IL+KA+   P+P FS  L L     + ++ ++ +    L  L++ LE  ++  FW   +    + ++   + GFE+ ++     ++S  ++++  +++ + + L    L  F+      CG+ +EGD     ++ +P N  N  + K  + + + +E  +R+
Sbjct:   27 YNPEAVGTLEQYLTTQCEERFCDCNANRTLLKLYQLNPDRIKDEVITNILVKAMTLFPSPQFSQALHLLSPSALSQQSELSEAVSKLRALNNQLEGAQYARFWATIESDDLYADLTTDIQGFEEMVRLRIAVLVSQAFREVQLSLMEQWLGLDEAPLKTFITEA---CGFKIEGD-----IVQIPKNPDNEAK-KAEIREDVNVEMFSRV 227          
The following BLAST results are available for this feature:
BLAST of CV712184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
EIF3K_ASPCL5.069e-1727.35Eukaryotic translation initiation factor 3 subunit... [more]
EIF3K_ASPFU8.647e-1728.16Eukaryotic translation initiation factor 3 subunit... [more]
EIF3K_ASPFC8.647e-1728.16Eukaryotic translation initiation factor 3 subunit... [more]
EIF3K_NEOFI1.129e-1628.16Eukaryotic translation initiation factor 3 subunit... [more]
EIF3K_EMENI1.475e-1630.14Eukaryotic translation initiation factor 3 subunit... [more]
EIF3K_BRUMA1.926e-1627.13Eukaryotic translation initiation factor 3 subunit... [more]
EIF3K_ASPOR2.516e-1627.40Eukaryotic translation initiation factor 3 subunit... [more]
EIF3K_CAEBR5.605e-1629.41Eukaryotic translation initiation factor 3 subunit... [more]
EIF3K_USTMA7.320e-1628.80Eukaryotic translation initiation factor 3 subunit... [more]
EIF3K_MAGGR7.320e-1623.81Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001A16_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001A16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712184 ID=CV712184; Name=CV712184; organism=Citrus sinensis; type=EST; length=872bp
TTGCAATAATAACATTGGTGTCTCATCAATTCCTCCAAGCCACTTGGGGC
TATGTTTTCAACATAAACACAAAAAGAGATTACAGCAGTCCCCAAAATTC
ACTGCAAGAGTGCTATAGCAGCTGGTTAAAACAAATGAAAATTTACCAAA
TGCCAGGATTTGAACTTCAATCAACCAAGAATGGGAAATATGCGGGTAAT
GTGTTCTAACGGGATGCTATCAGCAACATTCTTCTTCAGCTCGGGATGAT
TAAATTCATTAGGCGGCAGGACAATCAATTGGCTCGTACTTTGATCTCCT
TCAAGAATCCAGCCACAATTGGCCTTCTGGTGTTCAAGGAATTTGTCCAG
AGATAGACCTTTAAGATTGATAGCCTCGGCAAGCACAGTCCTTGGAATCT
TTTGATATGTCAATGAAAGGACATGAATTGCAAAGGACTGAATTGCTTGC
TCAAAACCTGGCACGGCTTCAACTATGTTACGATGCTTAGCTGCTTCATC
CCAGAAATGGCGGAACCTTCCTGTCTCCAAGTAGTGAGAGAGGACAATCA
GCGTCTTGAATTGATCCTCCATTTGCACTCTTTCTGGGATCAAAAAGAGA
CAGAGACTGAAATCTGGAGCTGGCATTGCCATAAGAGCCTTAATTAAAAT
GCGGGCAACAATTTGGGTACTCATTCTTTCTGGTTCAAACTGATAAAGAC
GAAGAAGGCAAAGATTTGCATCCAGACTATATGTTTGTGACAAGACCTGC
TCGTTAACGTAGTTTTCGAGATCGGGAAGGATGTCGGGATTGTAGGGATT
GACGGCGACAAGCTGCTCCACTGTGAATGAAACCTNGTGCTGTTGCTGCT
GTTGAGCCTCTCTTCCCATTTT
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