CV712184
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_CAEEL (Eukaryotic translation initiation factor 3 subunit K OS=Caenorhabditis elegans GN=eif-3.K PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.560e-16 Identity = 58/204 (28.43%), Postives = 94/204 (46.08%), Query Frame = -1 Query: 309 MGREAQQQQQHXVSFTVEQLVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRHFW-----------------DEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGW 869 M E Q++ H E + VN YNP+ + DL V V Y D L +L+LYQ PE+ +V ++L+K LM +P+ DF+L LI + + + L LE+ F FW + +++ + GFE A++ +A V+S+T+QKI + +L+ L G + DK + + GW Sbjct: 1 MSFEKLQKELH------EAIEGVNRYNPENVADLAACVQAMVNENKYDKDIVLTILKLYQLNPEKYDEAVVRQVLLKTLMVLPSSDFALAKCLIDTNRLGSQELRRIFDLGAVLESCNFAVFWKLVKGAYKPTTNPNEPFKVPGEVPKMIKPMVGFEDAVKHYACRVISVTFQKIEKKMLS---RLLGGASDKEVTALAQSFGW 195
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_NEUCR (Eukaryotic translation initiation factor 3 subunit K OS=Neurospora crassa GN=NCU09707 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.093e-15 Identity = 53/214 (24.77%), Postives = 97/214 (45.33%), Query Frame = -1 Query: 189 YNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIP---------ERVQMEDQFKTLIVLSHYLETGRFRHFW---DEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGWILEGDQSTSQLIVLPPNEFNHPELKKNVADSIPLEHITRI 794 YNP+ LE Y+ +Q + +AN LL+LYQ P+R+ +++ IL+KA+ P+P F L L L+ ++ + L L+ LE + FW D + ++ + GFE I+ ++ +Y++I VL + L + + + CGW +EGD ++ +P N N K + + + ++ R+ Sbjct: 23 YNPEAAGTLEAYLTQQCEEKFCDCNANRALLKLYQLNPDRIKDEVITNILVKAMTQFPSPQFDLALHLLSPSQSNPGPNSSSELTEAVSKLRALNAQLEGAEYARFWATLDSDDLYADLTTDIAGFEDMIRVRIAQLVGQSYREIQFPVLESWLGLN--NSEATTQFITETCGWKVEGD-----VVQIPKNADNEAR-KAEIREDVNVDMFARV 228
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_COCIM (Eukaryotic translation initiation factor 3 subunit K OS=Coccidioides immitis GN=CIMG_01880 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.017e-14 Identity = 58/215 (26.98%), Postives = 103/215 (47.91%), Query Frame = -1 Query: 249 LVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQ--------------------MEDQFKTLIVLSHYLETGRFRHFWDEAAK---HRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGL-SLDKFLEHQKANCGWILEGDQSTSQ---LIVLPPNEFN 812 L ++ YNP+ ++YV +Q +T+ ANL LL+LYQF P ++ + V IL KAL P+P FSL L L+P Q + + L LS LE+ ++ FW + ++ V GFE+ I+ + +++I VL ++++G+ +L+KF+ CGW ++ ++ + ++ +P N+ N Sbjct: 18 LNGLDRYNPETTAVFQDYVVQQCEDRTFDCYANLALLKLYQFNPPLLNAETVTNILAKALTVFPSPAFSLSLALLPAYTQPYATSSTQATTANLPMQTADFVEAVQKLTHLSTLLESAQYTAFWSTLNSDDLYADLTADVAGFEELIRIRIAVEVGKAFREIGADVLMGWLDMRGMETLEKFVVDV---CGWEVDKSKAEGENGVIVRVPRNKEN 229
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_YARLI (Eukaryotic translation initiation factor 3 subunit K OS=Yarrowia lipolytica GN=YALI0D23243g PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.851e-14 Identity = 62/220 (28.18%), Postives = 102/220 (46.36%), Query Frame = -1 Query: 189 LVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQF--EPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERV-------QMEDQFKTLIVLSHYLETGRFRHFW---DEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGWILEGDQSTSQLIVLPPNEFNHPELKKNVADSIPLEHITRI 812 L +++ YNP+ + L+ Y Q Q ++ANL LL+L QF +P I+ IL AL DF+ L ++P V + + + L L L+ RF FW + H +I V FE ++ + ++ Q I + V +N LS +KF ++ K GW +EG + +V+PPN+ N + +SI +E I+R+ Sbjct: 19 LSSLDRYNPEKISILQEYATTQCADQHSDIEANLALLKLLQFQQQPNPNKEDIICNILSMALANFLTSDFTTALHVLPSYVLDSPAADTLAESIQKLFHLYTLLDGCRFPEFWAVYERDDAHADITADVADFENLVRISITRAVDISSQAIHKDVFRSWLN---LSDNKFADYVK-ELGWKVEG-----ETVVVPPNKENEAK-PATTTESIKIEQISRL 228
BLAST of CV712184 vs. ExPASy Swiss-Prot
Match: EIF3K_CRYNE (Eukaryotic translation initiation factor 3 subunit K OS=Cryptococcus neoformans GN=CND02370 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.910e-12 Identity = 42/120 (35.00%), Postives = 66/120 (55.00%), Query Frame = -1 Query: 495 EQLVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMA-MPAPDFSLCLFLIPERV----QMEDQFKTLIVLSHYLE-------TGRFRHFWDE 818 E + V+ YNP LP +E+Y+ ++ Y L NL +L+LYQF P+ + ++ ILIKAL A + PDF+LCL ++ E +E + L+++ YL+ T +F FW E Sbjct: 25 ELIHGVDRYNPSNLPFMEDYLATELKEGQYDLFGNLAILKLYQFNPQHSNPDVIINILIKALAATVSGPDFNLCLEMLREPSAILHDIESADEALVIVMPYLQRLHELSRTCQFTKFWQE 144 The following BLAST results are available for this feature:
BLAST of CV712184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712184 ID=CV712184; Name=CV712184; organism=Citrus sinensis; type=EST; length=872bpback to top |