CV712174

Overview
NameCV712174
Unique NameCV712174
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7063 contig Csv1_Contig7063:292..998. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CV712174 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12
Identity = 41/136 (30.15%), Postives = 66/136 (48.53%), Query Frame = 3 
Query:    3 WSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKL 410
            W+   P ++PSDPY R+ ARFW  Y+D+K++   K +  + G E +E   ++LI     LE+        KPF+G    GF+D+    +  W    E     K+  E + P L  W +R      V + +P+  K+
Sbjct:   78 WNDKSP-LMPSDPYKRSQARFWVDYIDKKIYDTWKKMWLSKGEEHEEGK-KELISIFKQLEETLT----DKPFYGDDTFGFVDLCLITFSSWFYTYETYGNFKM--EEECPKLMAWVKRCMERETVSNTLPDAKKV 205
The following BLAST results are available for this feature:
BLAST of CV712174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
GSTX3_SOYBN2.669e-1230.15Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001A10_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712174 ID=CV712174; Name=CV712174; organism=Citrus sinensis; type=EST; length=707bp
CTTGGTCCTCTTCAGGTCCCTCTATTCTTCCTTCTGATCCTTATGACCGT
GCCGTTGCTCGTTTCTGGGCCGCTTATGTTGATGAGAAGTTGTTCCCTGC
CTTGAAAAGCATTGGTAGTGCAGATGGAGCGGAAGCTAAGGAAGCTGCGA
TTGAGCAATTGATTGAAGGCTTGGTTTTGCTGGAGGATGCTTTTGTTAAG
TGTAGCAAAGGGAAGCCTTTCTTTGGTGGAAGCCAAATTGGGTTTCTTGA
CATTGCATTTGGTTGCTACTTGGGATGGGTGAGAGTGACAGAGAAAATGA
TTGAGGTGAAGCTCCTTGATGAAGTCAAAACTCCTGGACTGTTCAAATGG
GCTGAGAGATTCTGTGCTGATGCCGCTGTCAAAGATGTTATGCCTGAGAC
TGATAAGCTTGCAGAGTTTGCTAAGGTTCTTGCCAAACTCAGAGCTTCTG
GCAAATGGAATTAAGAAGCTTAATTCTGTGCTTGGAGGGGCACAAAAAAA
AAGAAAAAAAAAAAAAAGAGTTGTTTCCAGAAATAAATTCGAATAAGAAT
TAAGTTTTGTTTTTGGTTTCGTTTGGAACGGTAAAGCCTGTATCATTTGG
GTTCTGTTATCGGGCTAGGCTGCAGCCTCTCTCGTAGACTCATGTATACC
AAGTGAAGGTATAAAGGTTATTGTGTTGTTTTTCTCCGCAGAAAAAAAAA
AAAAAAA
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