CV712172
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYB40_ANTMA (Myb-related protein 340 OS=Antirrhinum majus GN=MYB340 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.687e-23 Identity = 53/110 (48.18%), Postives = 70/110 (63.64%), Query Frame = 1 Query: 103 NRREVDRIKGPWSPEEDEALQQLVQKHGPRNWSLISKSIP-GRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 429 N +V+ KGPW+ EED L + HG W+ I++S R+GKSCRLRW N L P V TPEE +I+ HA++GN+W+ IA+ L GRTDN IKN+WN T +K Sbjct: 7 NSHDVEVRKGPWTMEEDLILINFISNHGEGVWNTIARSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWNRTRIQK 116
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYB48_ARATH (Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.204e-23 Identity = 51/120 (42.50%), Postives = 74/120 (61.67%), Query Frame = 1 Query: 127 KGPWSPEEDEALQQLVQKHGPRNWSLISK-SIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSSM---LTENGIFLNCN 474 KGPW+ +ED L V G R W I+K S R+GKSCRLRW N L P ++ TP+E+ +++ HA++GN+W+ IAR L GRTDN IKN+W + +++K ++ F NC+ Sbjct: 9 KGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKKRPVSPTSSFSNCS 128
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYB23_ARATH (Transcription factor MYB23 OS=Arabidopsis thaliana GN=MYB23 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.204e-23 Identity = 52/113 (46.02%), Postives = 73/113 (64.60%), Query Frame = 1 Query: 94 MAFNRREVDRIKGPWSPEEDEALQQLVQKHGPRNWSLISKSIP-GRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 429 M + +E + KG W+ EED+ L V+ HG +W+ I+K R GKSCRLRW N LSP V FT +E+++IIR H GN+W+ IA+ + GRTDN +KN+WN+ L +K Sbjct: 3 MTRDGKEHEYKKGLWTVEEDKILMDYVRTHGQGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVNRGNFTDQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKK 115
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: WER_ARATH (Transcription factor WER OS=Arabidopsis thaliana GN=WER PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.878e-23 Identity = 50/102 (49.02%), Postives = 69/102 (67.65%), Query Frame = 1 Query: 127 KGPWSPEEDEALQQLVQKHGPRNWSLISKSIP-GRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 429 KG W+ EED+ L V+ HG +W+ I+K R GKSCRLRW N LSP V+ FT +E+++IIR H GN+W+ IA+ + GRTDN +KN+WN+ L +K Sbjct: 18 KGLWTVEEDKILMDYVKAHGKGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVKRGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKK 119
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYB82_ARATH (Transcription factor MYB82 OS=Arabidopsis thaliana GN=MYB82 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.878e-23 Identity = 51/105 (48.57%), Postives = 70/105 (66.67%), Query Frame = 1 Query: 127 KGPWSPEEDEALQQLVQKHGPRNWSLISK-SIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSS 438 +G W PEED L+ V+ HG NW+ IS+ S R GKSCRLRW N L P ++ + +P+E ++IIR H GN+W+ IA L GRTDN +KN+WN+ L +K +S Sbjct: 14 RGLWKPEEDMILKSYVETHGEGNWADISRRSGLKRGGKSCRLRWKNYLRPNIKRGSMSPQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKKPNS 118
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYB30_ANTMA (Myb-related protein 330 OS=Antirrhinum majus GN=MYB330 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.878e-23 Identity = 53/105 (50.48%), Postives = 68/105 (64.76%), Query Frame = 1 Query: 127 KGPWSPEEDEALQQLVQKHGPRNWSLISKSIPG-RSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSS 438 KG W+ EED+ L ++ HG W + K+ R GKSCRLRW N L P ++ FT EEDE+II+ H+ GNKW+ IA L GRTDN IKN+WN+ +KRK S Sbjct: 14 KGAWTKEEDQRLINYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDEIIIKLHSLLGNKWSLIAGALPGRTDNEIKNYWNTHIKRKLVS 118
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYB4_ARATH (Transcription repressor MYB4 OS=Arabidopsis thaliana GN=MYB4 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.759e-23 Identity = 52/102 (50.98%), Postives = 67/102 (65.69%), Query Frame = 1 Query: 127 KGPWSPEEDEALQQLVQKHGPRNWSLISKSIPG-RSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 429 KG W+ EEDE L ++ HG W + K+ R GKSCRLRW N L P ++ FT EEDE+II+ H+ GNKW+ IA L GRTDN IKN+WN+ ++RK Sbjct: 14 KGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRK 115
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYB6_ARATH (Transcription repressor MYB6 OS=Arabidopsis thaliana GN=MYB6 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.909e-23 Identity = 52/105 (49.52%), Postives = 68/105 (64.76%), Query Frame = 1 Query: 127 KGPWSPEEDEALQQLVQKHGPRNWSLISKSIPG-RSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSS 438 KG W+ EED+ L ++ HG W + KS R GKSCRLRW N L P ++ FT +ED++II+ H+ GNKW+ IA L GRTDN IKN+WN+ +KRK S Sbjct: 14 KGAWTKEEDQRLVDYIRNHGEGCWRSLPKSAGLLRCGKSCRLRWINYLRPDLKRGNFTDDEDQIIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLS 118
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: RAX2_ARATH (Transcription factor RAX2 OS=Arabidopsis thaliana GN=RAX2 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.411e-23 Identity = 53/103 (51.46%), Postives = 67/103 (65.05%), Query Frame = 1 Query: 127 KGPWSPEEDEALQQLVQKHGPR-NW-SLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 429 +GPWSPEED L+ ++K G NW +L K+ R GKSCRLRW N L P + H FT EED +I A G++W+ IA L GRTDN IKN+WN+ LK+K Sbjct: 14 RGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLNYLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLKKK 116
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYB08_ANTMA (Myb-related protein 308 OS=Antirrhinum majus GN=MYB308 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.411e-23 Identity = 52/105 (49.52%), Postives = 68/105 (64.76%), Query Frame = 1 Query: 127 KGPWSPEEDEALQQLVQKHGPRNWSLISKSIPG-RSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSS 438 KG W+ EED+ L ++ HG W + K+ R GKSCRLRW N L P ++ FT EEDE+II+ H+ GNKW+ IA L GRTDN IKN+WN+ ++RK S Sbjct: 14 KGAWTKEEDDRLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLS 118 The following BLAST results are available for this feature:
BLAST of CV712172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV712172 ID=CV712172; Name=CV712172; organism=Citrus sinensis; type=EST; length=754bpback to top |