CV712172
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYB12_ARATH (Transcription factor MYB12 OS=Arabidopsis thaliana GN=MYB12 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.156e-22 Identity = 48/112 (42.86%), Postives = 70/112 (62.50%), Query Frame = 1 Query: 127 KGPWSPEEDEALQQLVQKHGPRNWSLISKSIP-GRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSSMLTENGI 459 +G W+ EED+ L +Q +G +W + K+ R GKSCRLRW N L ++ TPEE+E++++ H+ GN+W+ IA L GRTDN IKN+WNS L RK + + + I Sbjct: 14 RGRWTAEEDQILSNYIQSNGEGSWRSLPKNAGLKRCGKSCRLRWINYLRSDLKRGNITPEEEELVVKLHSTLGNRWSLIAGHLPGRTDNEIKNYWNSHLSRKLHNFIRKPSI 125
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYB38_MAIZE (Myb-related protein Zm38 OS=Zea mays PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.427e-22 Identity = 48/102 (47.06%), Postives = 67/102 (65.69%), Query Frame = 1 Query: 127 KGPWSPEEDEALQQLVQKHGPRNWSLISKSIPG-RSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 429 +G W+ EEDE L ++ HG W + K+ R GKSCRLRW N L P ++ FT +ED++I++ H+ GNKW+ IA L GRTDN IKN+WN+ ++RK Sbjct: 14 RGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRK 115
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYB5_ARATH (Transcription repressor MYB5 OS=Arabidopsis thaliana GN=MYB5 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.088e-22 Identity = 48/102 (47.06%), Postives = 67/102 (65.69%), Query Frame = 1 Query: 127 KGPWSPEEDEALQQLVQKHGPRNW-SLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 429 +GPW+ EEDE L ++K G W SL ++ R GKSCRLRW N L P V+ T +E+++I+R H GN+W+ IA + GRTDN IKN+WN+ L++K Sbjct: 25 RGPWTVEEDEILVSFIKKEGEGRWRSLPKRAGLLRCGKSCRLRWMNYLRPSVKRGGITSDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLRKK 126
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYB3_HORVU (Myb-related protein Hv33 OS=Hordeum vulgare GN=MYB2 PE=2 SV=3) HSP 1 Score: 103.99 bits (258), Expect = 9.258e-22 Identity = 49/102 (48.04%), Postives = 65/102 (63.73%), Query Frame = 1 Query: 127 KGPWSPEEDEALQQLVQKHGPRNWSLISK-SIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 429 KG WSPEEDE L + +HG WS + + + R GKSCRLRW N L P ++ F+ +E++ I+ H GN+W+ IA L GRTDN IKN WNS +K+K Sbjct: 16 KGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRGCFSQQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKK 117
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: RAX3_ARATH (Transcription factor RAX3 OS=Arabidopsis thaliana GN=RAX3 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.209e-21 Identity = 49/103 (47.57%), Postives = 66/103 (64.08%), Query Frame = 1 Query: 127 KGPWSPEEDEALQQLVQKHGPR-NWSLISKSIP-GRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 429 KGPWSPEED L+ ++ G NW + + I R GKSCRLRW N L P ++H F+ EE+ +I + G++W+ IA L GRTDN IKN+WN+ LK+K Sbjct: 14 KGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKK 116
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYB21_ARATH (Transcription factor MYB21 OS=Arabidopsis thaliana GN=MYB21 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.579e-21 Identity = 52/119 (43.70%), Postives = 73/119 (61.34%), Query Frame = 1 Query: 112 EVDRIKGPWSPEEDEALQQLVQKHGPRNWSLISKSIP-GRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKR--KCSSMLTENGI 459 E + KGPW+ EED L + HG W+ ++KS R+GKSCRLRW N L P V TPEE +I+ HA++GN+W+ IA+ L GRTDN IKN W + +++ K S + T + + Sbjct: 17 EAEVRKGPWTMEEDLILINYIANHGDGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLIIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKYIKQSDVTTTSSV 135
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYB15_ANTMA (Myb-related protein 315 OS=Antirrhinum majus GN=MYB315 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.694e-21 Identity = 48/102 (47.06%), Postives = 64/102 (62.75%), Query Frame = 1 Query: 127 KGPWSPEEDEALQQLVQKHGPRNWSLISKSIP-GRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 429 +GPW+ EED+ L V K+G + W +I K R GKSCRLRW N L P ++ T E+ II HA GN+W+ IA + GRTDN IKN+WN+ +K+K Sbjct: 14 RGPWTEEEDQKLTSYVLKNGIQGWRVIPKLAGLSRCGKSCRLRWMNYLRPDLKKGPLTEMEENQIIELHAHLGNRWSKIALHIPGRTDNEIKNYWNTHIKKK 115
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: TT2_ARATH (Transcription factor TT2 OS=Arabidopsis thaliana GN=TT2 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.518e-21 Identity = 50/116 (43.10%), Postives = 69/116 (59.48%), Query Frame = 1 Query: 106 RREVDRIKGPWSPEEDEALQQLVQKHGPRNWSLISKSIP-GRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSSMLTE 450 R E++R G W+ ED+ L+ + HG WS + R GKSCRLRW N L P ++ + +E+E+IIR H GN+W+ IA L GRTDN IKNHWNS L+++ T+ Sbjct: 11 REELNR--GAWTDHEDKILRDYITTHGEGKWSTLPNQAGLKRCGKSCRLRWKNYLRPGIKRGNISSDEEELIIRLHNLLGNRWSLIAGRLPGRTDNEIKNHWNSNLRKRLPKTQTK 124
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYBC_MAIZE (Anthocyanin regulatory C1 protein OS=Zea mays GN=C1 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.595e-21 Identity = 48/105 (45.71%), Postives = 66/105 (62.86%), Query Frame = 1 Query: 127 KGPWSPEEDEALQQLVQKHGPRNWSLI-SKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSS 438 +G W+ +ED+AL V+ HG W + K+ R GKSCRLRW N L P + + +E+++IIR H GN+W+ IA L GRTDN IKN+WNSTL R+ + Sbjct: 14 RGAWTSKEDDALAAYVKAHGEGKWREVPQKAGLRRCGKSCRLRWLNYLRPNIRRGNISYDEEDLIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNSTLGRRAGA 118
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: ODO1_PETHY (Protein ODORANT1 OS=Petunia hybrida GN=ODO1 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.001e-21 Identity = 48/107 (44.86%), Postives = 67/107 (62.62%), Query Frame = 1 Query: 127 KGPWSPEEDEALQQLVQKHGPRNWSLISKSIPG--RSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSSM 441 KGPW+ EED+ L + +G W + K + G R GKSCRLRW N L P ++ + E++++I H+R GN+W+ IA L GRTDN IKNHWN+ +K+K M Sbjct: 14 KGPWTAEEDKKLISFILTNGQCCWRAVPK-LAGLKRCGKSCRLRWTNYLRPDLKRGLLSDAEEKLVIDLHSRLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKM 119 The following BLAST results are available for this feature:
BLAST of CV712172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712172 ID=CV712172; Name=CV712172; organism=Citrus sinensis; type=EST; length=754bpback to top |