CV712172
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYBP_MAIZE (Myb-related protein P OS=Zea mays GN=P PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.280e-20 Identity = 47/102 (46.08%), Postives = 65/102 (63.73%), Query Frame = 1 Query: 127 KGPWSPEEDEALQQLVQKHGPRNWSLISKSIPG-RSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 429 +G W+ EED+ L + +HG +W + K+ R GKSCRLRW N L V+ + EE+++II+ HA GN+W+ IA L GRTDN IKN+WNS L R+ Sbjct: 14 RGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQ 115
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYB2_PHYPA (Myb-related protein Pp2 OS=Physcomitrella patens GN=PP2 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.978e-20 Identity = 48/106 (45.28%), Postives = 66/106 (62.26%), Query Frame = 1 Query: 127 KGPWSPEEDEALQQLVQKHGPRNWSLISKSIPG--RSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSS 438 +GPW+ EED+ L + +G W I K + G R GKSCRLRW N L P ++ F+ E+ +I+ HA GN+W+ IA L GRTDN IKN+WN+ LK++ S Sbjct: 14 RGPWTSEEDQKLVSHITNNGLSCWRAIPK-LAGLLRCGKSCRLRWTNYLRPDLKRGIFSEAEENLILDLHATLGNRWSRIAAQLPGRTDNEIKNYWNTRLKKRLRS 118
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYB1_NEUCR (Myb-like DNA-binding protein myb-1 OS=Neurospora crassa GN=rca-1 PE=3 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.930e-19 Identity = 46/104 (44.23%), Postives = 63/104 (60.58%), Query Frame = 1 Query: 118 DRIKGPWSPEEDEALQQLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 429 D+ +GPWS ED+ L +LV+ GP NW +++ + R+ K CR RW L P + H T EE +I+R G +WA IAR L GR+DNA+KN+WN RK Sbjct: 6 DQRRGPWSAGEDQRLIKLVKDLGPGNWVNVARILGTRTPKQCRERWHQNLKPGLNHGPMTQEEAAIIVREVDLKGPRWADIARKLQGRSDNAVKNYWNGLNNRK 109
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MY114_ARATH (Transcription factor MYB114 OS=Arabidopsis thaliana GN=MYB114 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.251e-18 Identity = 44/106 (41.51%), Postives = 64/106 (60.38%), Query Frame = 1 Query: 127 KGPWSPEEDEALQQLVQKHGPRNWSLISKSIPGRSG-----KSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 429 KG W+ EED L+Q + K+G W +P R+G KSCRLRW N L P ++ F+ +E ++++R H GN+W+ IA L GRT N +KN+WN+ L +K Sbjct: 10 KGAWTAEEDSLLRQCIGKYGEGKWH----QVPLRAGLNRCRKSCRLRWLNYLKPSIKRGKFSSDEVDLLLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MY104_ARATH (Transcription factor MYB104 OS=Arabidopsis thaliana GN=MYB104 PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.251e-18 Identity = 45/105 (42.86%), Postives = 61/105 (58.10%), Query Frame = 1 Query: 127 KGPWSPEEDEALQQLVQKHGPRNWSLISKSIPGRSG-----KSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKR 426 K W PEED L+ V ++G R W+ +P R+G SCR RW N L P ++ FT EE++ +++ HA GNKW+ +AR GRTDN IKN WN+ R Sbjct: 18 KSKWKPEEDRILKDYVIQYGDRTWT----HVPKRTGLPHNPASCRFRWMNHLKPSLKKGPFTDEEEKRVLQLHAVLGNKWSQMAREFPGRTDNEIKNFWNARRMR 118
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYB75_ARATH (Transcription factor MYB75 OS=Arabidopsis thaliana GN=MYB75 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.787e-18 Identity = 43/106 (40.57%), Postives = 63/106 (59.43%), Query Frame = 1 Query: 127 KGPWSPEEDEALQQLVQKHGPRNWSLISKSIPGRSG-----KSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 429 KG W+ EED L+Q + K+G W +P R+G KSCRLRW N L P ++ + +E ++++R H GN+W+ IA L GRT N +KN+WN+ L +K Sbjct: 10 KGAWTTEEDSLLRQCINKYGEGKWH----QVPVRAGLNRCRKSCRLRWLNYLKPSIKRGKLSSDEVDLLLRLHRLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MY113_ARATH (Transcription factor MYB113 OS=Arabidopsis thaliana GN=MYB113 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.383e-17 Identity = 41/102 (40.20%), Postives = 61/102 (59.80%), Query Frame = 1 Query: 127 KGPWSPEEDEALQQLVQKHGPRNWSLIS-KSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 429 KG W+ EED L+Q + K+G W + ++ R KSCRLRW N L P ++ +E ++++R H GN+W+ IA L GRT N +KN+WN+ L +K Sbjct: 10 KGTWTTEEDILLRQCIDKYGEGKWHRVPLRTGLNRCRKSCRLRWLNYLKPSIKRGKLCSDEVDLVLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYB90_ARATH (Transcription factor MYB90 OS=Arabidopsis thaliana GN=MYB90 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.807e-17 Identity = 45/121 (37.19%), Postives = 67/121 (55.37%), Query Frame = 1 Query: 127 KGPWSPEEDEALQQLVQKHGPRNWSLISKSIPGRSG-----KSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK-----CSSMLTENGI 459 KG W+ EED L+ + K+G W +P R+G KSCRLRW N L P ++ + +E ++++R H GN+W+ IA L GRT N +KN+WN+ L +K C S + + I Sbjct: 10 KGAWTAEEDSLLRLCIDKYGEGKWH----QVPLRAGLNRCRKSCRLRWLNYLKPSIKRGRLSNDEVDLLLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKKHESSCCKSKMKKKNI 126
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYBL_DICDI (Myb-like protein L OS=Dictyostelium discoideum GN=mybL PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.812e-16 Identity = 40/100 (40.00%), Postives = 55/100 (55.00%), Query Frame = 1 Query: 127 KGPWSPEEDEALQQLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFG-NKWATIARLLNGRTDNAIKNHWNSTLK 423 KG WSPEED+ L V +G NW LI + GR+ CR R+CN L PQ+ +TP+ED+ + + G KW+ +A+L+ RTDN W K Sbjct: 652 KGRWSPEEDQCLINAVNAYGKGNWILIKNHVKGRTDVQCRERYCNVLDPQLTKIRWTPQEDKRLFDITNKVGIGKWSDVAKLMENRTDNQCWRRWKQLNK 751
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: RS2_MAIZE (Protein rough sheath 2 OS=Zea mays GN=RS2 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.870e-14 Identity = 38/94 (40.43%), Postives = 53/94 (56.38%), Query Frame = 1 Query: 136 WSPEEDEALQQLVQKHGPRNWSLISKSIP---GRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHW 408 W PEED L+ V+++GPR W L+S+ + R KSC RW N L P ++ + T EE ++IR A+ GNKW IA + GRT + W Sbjct: 7 WRPEEDAVLRAYVRQYGPREWHLVSQRMNVALDRDAKSCLERWKNYLRPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWW 100 The following BLAST results are available for this feature:
BLAST of CV712172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712172 ID=CV712172; Name=CV712172; organism=Citrus sinensis; type=EST; length=754bpback to top |