CV712163

Overview
NameCV712163
Unique NameCV712163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length472
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2407 contig Csv1_Contig2407:66..537. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 2.743e-35
Identity = 76/159 (47.80%), Postives = 103/159 (64.78%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND---AGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            WN R+KIA G A+ LE+LH+  +  V++++ KS+NILLD   +P+LSD GLA   P  D++  +       GY APE AM+GQ  +KSDVYSFGVV LEL+TGRK  DS  P  EQ+LV WA P  +D     K+ DP LKG +P ++L +   V ++C
Sbjct:  184 WNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEMPHGEQNLVAWARPLFNDRRKFIKLADPRLKGRFPTRALYQALAVASMC 342          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 4.679e-35
Identity = 75/159 (47.17%), Postives = 105/159 (66.04%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND---AGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            WN+R+KIA G AR LEYLH+  +  V+++++K +NILL  +  P+LSD GLA   P+ D+   +       GY AP+ AM+GQ   KSD+YSFGVV+LEL+TGRK  D+++ R +Q+LV WA P   D     KMVDP L+G YPV+ L +   + A+C
Sbjct:  201 WNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQNLVGWARPLFKDRRNFPKMVDPLLQGQYPVRGLYQALAISAMC 359          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 3.033e-34
Identity = 78/159 (49.06%), Postives = 108/159 (67.92%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND---AGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W  RVKIA+G A+ LEYLHE     ++H++IKS+NILL ++   +++D  L++  P+    L++       GY APE AM+GQ + KSDVYSFGVV+LELLTGRKP D + PR +QSLV WATP+L + D + + VD  L   YP K++++ A V ALC
Sbjct:  169 WAQRVKIAVGAAKGLEYLHEKAQPHIIHRDIKSSNILLFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPRLSE-DKVKQCVDARLNTDYPPKAIAKMAAVAALC 326          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 2.568e-33
Identity = 73/159 (45.91%), Postives = 106/159 (66.67%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND---AGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            WN RVKIA G A+ LE+LHE     +VH++++S+N+LL ++   +++D  L +   +    L++       GY APE AM+GQ   KSDVYSFGVV+LELLTGRKP D + P+ +QSLV WATP+L + D + + +DP L   +P K++++ A V ALC
Sbjct:  175 WNQRVKIAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFVAKMADFNLTNASSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSE-DKVKQCIDPKLNNDFPPKAVAKLAAVAALC 332          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 7.731e-30
Identity = 72/159 (45.28%), Postives = 97/159 (61.01%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND---AGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W  R+K+A+G A+ L +LH+  S  V++++ K+ANILLD E N +LSD GLA   P  D+   +       GY APE   +G+   KSDVYSFGVV+LELL+GR+  D S+  +EQSLV WATP L D   L +++D  L G YP K     A +   C
Sbjct:  188 WAIRMKVAIGAAKGLTFLHDAKS-QVIYRDFKAANILLDAEFNSKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKVGMEQSLVDWATPYLGDKRKLFRIMDTRLGGQYPQKGAYTAASLALQC 345          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 2.487e-28
Identity = 69/158 (43.67%), Postives = 101/158 (63.92%), Query Frame = -2
Query:    4 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND---AGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIAL 468
            WN+RV++ALG AR L +LH      V++++ K++NILLD+  N +LSD GLA + P  D +  +       GY APE   +G  ++KSDVYSFGVV+LELL+GR+  D ++P  E +LV WA P L +   L +++DP L+G Y +    + A V+AL
Sbjct:  175 WNTRVRMALGAARGLAFLHNA-QPQVIYRDFKASNILLDSNYNAKLSDFGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEHNLVDWARPYLTNKRRLLRVMDPRLQGQYSLTRALKIA-VLAL 330          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 3.248e-28
Identity = 70/159 (44.03%), Postives = 95/159 (59.75%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND---AGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W  R+K+A+G A+ L +LHE  S  V++++ K+ANILLD + N +LSD GLA   P  D    +       GY APE   +G+   KSDVYSFGVV+LEL++GR+  D+S    E SLV WATP L D   L +++D  L G YP K     A++   C
Sbjct:  191 WAIRMKVAVGAAKGLTFLHEAKS-QVIYRDFKAANILLDADFNAKLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGRRAMDNSNGGNEYSLVDWATPYLGDKRKLFRIMDTKLGGQYPQKGAFTAANLALQC 348          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.234e-27
Identity = 65/159 (40.88%), Postives = 99/159 (62.26%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEA---LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W +R+ IALG AR L YLH     SV+H+++KS+NILLD+ +  +++D G +   P   ++   L     +GY  PE   + Q + KSDV+SFGVV+LE+++GR+P +  RPR+E SLV WA P +     + ++VDP +KG Y  ++L R  +V   C
Sbjct:  692 WPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRVEWSLVEWAKPYIR-ASKVDEIVDPGIKGGYHAEALWRVVEVALQC 849          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 1.234e-27
Identity = 65/159 (40.88%), Postives = 98/159 (61.64%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEA---LNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W +R+ IALG AR L YLH     SV+H+++KS+NILLD  +  +++D G +   P   ++   L     +GY  PE   + Q + KSDV+SFGVV+LE+++GR+P +  RPR+E SLV WA P +     + ++VDP +KG Y  ++L R  +V   C
Sbjct:  693 WPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRIEWSLVEWAKPYIR-ASKVDEIVDPGIKGGYHAEALWRVVEVALQC 850          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 2.105e-27
Identity = 65/159 (40.88%), Postives = 97/159 (61.01%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND---AGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W  R+K+ALG A+ L +LH     SV++++ K++NILLD+E N +LSD GLA + P  D++  +       GY APE   +G    KSDVYS+GVV+LE+L+GR+  D +RP  EQ LV WA P L +   L +++D  L+  Y ++   + A +   C
Sbjct:  176 WTLRLKVALGAAKGLAFLHNA-ETSVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRC 333          
The following BLAST results are available for this feature:
BLAST of CV712163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
PBS1_ARATH2.743e-3547.80Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
RLCK7_ARATH4.679e-3547.17Probable serine/threonine-protein kinase RLCKVII O... [more]
PTI1_SOLLC3.033e-3449.06Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
Y2197_ARATH2.568e-3345.91Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
APK2B_ARATH7.731e-3045.28Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
NAK_ARATH2.487e-2843.67Probable serine/threonine-protein kinase NAK OS=Ar... [more]
APK2A_ARATH3.248e-2844.03Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
NORK_PEA1.234e-2740.88Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
NORK_MEDTR1.234e-2740.88Nodulation receptor kinase OS=Medicago truncatula ... [more]
APK1B_ARATH2.105e-2740.88Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001A05_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712163 ID=CV712163; Name=CV712163; organism=Citrus sinensis; type=EST; length=472bp
ACAAAGAGCAATGACATCTGCAAAACGGGAGAGAGATTTGACTGGGTAGA
GCCCTTTGAGTGCGGGATCAACCATTTTAGCAAGGGCATCAATGTCATGG
AGCTGAGGAGTTGCCCATCGAACCAAAGATTGCTCCAATCTTGGCCTCGA
GCTATCAAATGGTTTACGTCCAGTAAGAAGCTCCAGCATAACAACCCCAA
AACTGTAGACATCACTTTTTATATTATATTGACCAGACATGGCAACCTCA
GGTGCACCATATCCAGAACCAGCATCATTGTTCAATGCCTCATCTGCATT
TGGCATATTGCTTGCCAGGCCACAGTCAGAAAGTTGAGGATTGAGCTCGT
TGTCCAGTAATATGTTGGCCGACTTAATATTTTTGTGAACAACTGACAGT
GAGCAGACTTCATGCAGGTACTCCAGTGCTCGTGCAGTCCCCAAAGCAAT
CTTGACACGGGAGTTCCATATC
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