CV712163

Overview
NameCV712163
Unique NameCV712163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length472
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.616e-19
Identity = 58/140 (41.43%), Postives = 85/140 (60.71%), Query Frame = -2
Query:   58 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND--AGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPAL 468
            W +R KIA+G AR L +LH  C   ++H+++KS+N+LLD  L  ++SD G+A  M   D  L+    AG+ GY  PE   S + + K DVYS+GVV+LELLTG++P DS+    + +LV W   +LH    +  + D  L
Sbjct:  985 WPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQPTDSA-DFGDNNLVGWV--KLHAKGKITDVFDREL 1121          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.616e-19
Identity = 58/140 (41.43%), Postives = 85/140 (60.71%), Query Frame = -2
Query:   58 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND--AGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPAL 468
            W +R KIA+G AR L +LH  C   ++H+++KS+N+LLD  L  ++SD G+A  M   D  L+    AG+ GY  PE   S + + K DVYS+GVV+LELLTG++P DS+    + +LV W   +LH    +  + D  L
Sbjct:  985 WPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQPTDSA-DFGDNNLVGWV--KLHAKGKITDVFDREL 1121          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y1124_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g12460 OS=Arabidopsis thaliana GN=At1g12460 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.110e-19
Identity = 53/110 (48.18%), Postives = 70/110 (63.64%), Query Frame = -2
Query:  151 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADE---ALNNDAGSGYGAPEVA-MSGQYNIKSDVYSFGVVMLELLTGRKPFDS 468
            W+ R +IALGTA+AL +LH  C  +++H N+KS NILLD     +LSD GL   +P  D            GY APE+A  S + + K DVYS+GVV+LEL+TGRKP +S
Sbjct:  698 WHRRFQIALGTAKALSFLHNDCKPAILHLNVKSTNILLDERYEAKLSDYGLEKFLPVMDSFGLTKKFHNAVGYIAPELAQQSLRASEKCDVYSYGVVLLELVTGRKPVES 807          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.110e-19
Identity = 52/112 (46.43%), Postives = 70/112 (62.50%), Query Frame = -2
Query:  142 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNAD--EALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRP 468
            W  R KI LG A+ L YLH  C   +VH++IK+ NIL+  +  P + D GLA  + + D   + N  AGS GY APE   S +   KSDVYS+GVV+LE+LTG++P D + P
Sbjct:  891 WEVRYKIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPDFEPYIGDFGLAKLVDDGDFARSSNTIAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTIP 1002          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.756e-19
Identity = 46/108 (42.59%), Postives = 71/108 (65.74%), Query Frame = -2
Query:  151 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGS--GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDS 468
            WN+R +IA G A  L YLHE     V+H+++K +N+L+D+++NP+L D GLA       ++         GY APE+A +G  +  SDV++FGV++LE+++GRKP DS
Sbjct:  462 WNARFQIAKGIASGLLYLHEEWEQIVIHRDVKPSNVLIDSDMNPRLGDFGLARLYERGSQSCTTVVVGTIGYMAPELARNGNSSSASDVFAFGVLLLEIVSGRKPTDS 569          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.756e-19
Identity = 55/143 (38.46%), Postives = 81/143 (56.64%), Query Frame = -2
Query:   46 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS--NMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLY 468
            WN+R +IA G A  L YLHE     V+H+++K +N+L+D+++NP+L D GLA         E        GY APE++ +G  +  SDV++FGV++LE++ GRKP DS        LV W   +LH    +   +DP L   Y
Sbjct:  465 WNARFQIAKGIASGLLYLHEEWEKIVIHRDVKPSNVLIDSKMNPRLGDFGLARLYERGTLSETTALVGTIGYMAPELSRNGNPSSASDVFAFGVLLLEIVCGRKPTDSG----TFFLVDWVM-ELHANGEILSAIDPRLGSGY 602          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 3.599e-19
Identity = 53/159 (33.33%), Postives = 87/159 (54.72%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS--NMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQS-LVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W +R +IALG AR  EYLHE C+  ++H+++K+AN+LLD +    + D GLA   ++   +         G+ APE   +G+ + ++DV+ +G+++LEL+TG++  D SR   E   L+     +L     L  +VD  L G Y  + +     V  LC
Sbjct:  388 WETRKRIALGAARGFEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRRTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLGAIVDKNLDGEYIKEEVEMMIQVALLC 546          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 3.599e-19
Identity = 57/144 (39.58%), Postives = 84/144 (58.33%), Query Frame = -2
Query:   55 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNA--DEALNNDAGSGYGAPEVAMSGQYNI---KSDVYSFGVVMLELLTGRKPF-DSSRPRLEQSLVRWATPQLHDIDALAKMVDPALK 468
            W  R KIALGTARAL +LH  CS  ++H+++K++++ LD    P+LSD GLA    N   DE ++     GY  PE  +  ++ +   KSDVY FGVV+ EL+TG+KP  D      + +LV W    +    A +K +DP ++
Sbjct:  669 WRFRHKIALGTARALAFLHHGCSPPIIHRDVKASSVYLDQNWEPRLSDFGLAKVFGNGLDDEIIH--GSPGYLPPEF-LQPEHELPTPKSDVYCFGVVLFELMTGKKPIEDDYLDEKDTNLVSWVRSLVRKNQA-SKAIDPKIQ 808          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 3.599e-19
Identity = 57/158 (36.08%), Postives = 87/158 (55.06%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGS--GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W  R+KIAL +A  +EYLH  C   +VH+++KS NILL  E   +++D GL+ +    +EA         GY  PE   +   ++KSDVYSFGVV+LE+++G+   D SR     ++V W +  L + D +  +VDP L   Y   S  +  ++   C
Sbjct:  655 WPIRLKIALESAIGIEYLHTGCKPKIVHRDVKSTNILLSEEFEAKIADFGLSRSFLIGNEAQPTVVAGTFGYLDPEYHKTSLLSMKSDVYSFGVVLLEIISGQDVIDLSRENC--NIVEWTSFILENGD-IESIVDPNLHQDYDTSSAWKVVELAMSC 809          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: RPK2_ARATH (LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana GN=RPK2 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 3.599e-19
Identity = 56/123 (45.53%), Postives = 79/123 (64.23%), Query Frame = -2
Query:  112 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNAD-EALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQ--SLVRWA 468
            W    KIAL  ARAL YLH+ C   V+H+++K +NILLD++ N  LSD GLA  +  ++  A    AG+ GY APE AM+ + + K+DVYS+GVV+LELL+ +K  D S        ++V+WA
Sbjct:  967 WRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDCNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFVSYGNGFNIVQWA 1089          
The following BLAST results are available for this feature:
BLAST of CV712163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
BRI1_SOLPE1.616e-1941.43Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
BRI1_SOLLC1.616e-1941.43Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
Y1124_ARATH2.110e-1948.18Probable LRR receptor-like serine/threonine-protei... [more]
RCH1_ARATH2.110e-1946.43LRR receptor-like serine/threonine-protein kinase ... [more]
LRKA3_ARATH2.756e-1942.59Lectin-domain containing receptor kinase A4.3 OS=A... [more]
LRKA1_ARATH2.756e-1938.46Lectin-domain containing receptor kinase A4.1 OS=A... [more]
Y5129_ARATH3.599e-1933.33Probable LRR receptor-like serine/threonine-protei... [more]
Y2242_ARATH3.599e-1939.58Probable LRR receptor-like serine/threonine-protei... [more]
Y1755_ARATH3.599e-1936.08Probable LRR receptor-like serine/threonine-protei... [more]
RPK2_ARATH3.599e-1945.53LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001A05_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712163 ID=CV712163; Name=CV712163; organism=Citrus sinensis; type=EST; length=472bp
ACAAAGAGCAATGACATCTGCAAAACGGGAGAGAGATTTGACTGGGTAGA
GCCCTTTGAGTGCGGGATCAACCATTTTAGCAAGGGCATCAATGTCATGG
AGCTGAGGAGTTGCCCATCGAACCAAAGATTGCTCCAATCTTGGCCTCGA
GCTATCAAATGGTTTACGTCCAGTAAGAAGCTCCAGCATAACAACCCCAA
AACTGTAGACATCACTTTTTATATTATATTGACCAGACATGGCAACCTCA
GGTGCACCATATCCAGAACCAGCATCATTGTTCAATGCCTCATCTGCATT
TGGCATATTGCTTGCCAGGCCACAGTCAGAAAGTTGAGGATTGAGCTCGT
TGTCCAGTAATATGTTGGCCGACTTAATATTTTTGTGAACAACTGACAGT
GAGCAGACTTCATGCAGGTACTCCAGTGCTCGTGCAGTCCCCAAAGCAAT
CTTGACACGGGAGTTCCATATC
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