CV712163

Overview
NameCV712163
Unique NameCV712163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length472
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 3.599e-19
Identity = 57/159 (35.85%), Postives = 93/159 (58.49%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND--AGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W+ R++IAL  A  LEYLH  C+  +VH+++K+ANILLD     +L+D GL+ +     E+  +   AG+ GY  PE   SG+   KSDVYSFG+V+LE++T +   + +    +  + +W   Q++  D L +++DP L+  Y + S  R  ++   C
Sbjct:  660 WSIRLRIALEAALGLEYLHIGCTPPMVHRDVKTANILLDENFKAKLADFGLSRSFQGEGESQESTTIAGTLGYLDPECYHSGRLGEKSDVYSFGIVLLEMITNQPVINQTSG--DSHITQWVGFQMNRGDIL-EIMDPNLRKDYNINSAWRALELAMSC 815          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 3.599e-19
Identity = 55/143 (38.46%), Postives = 79/143 (55.24%), Query Frame = -2
Query:   58 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAG-SGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDI-----DALAKMVDPAL 468
            W++R  +ALG A  L YLH  C   +VH++IK  NIL+D++L P + D GLA  + ++  +     G +GY APE A       +SDVYS+GVV+LEL+T ++  D S P     +V W    L        D +  +VDP L
Sbjct:  925 WSARYNVALGVAHGLAYLHYDCHPPIVHRDIKPENILMDSDLEPHIGDFGLARLLDDSTVSTATVTGTTGYIAPENAFKTVRGRESDVYSYGVVLLELVTRKRAVDKSFPE-STDIVSWVRSALSSSNNNVEDMVTTIVDPIL 1066          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 3.599e-19
Identity = 57/162 (35.19%), Postives = 96/162 (59.26%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS--NMPNADEALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQS---LVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W  R KI +GTAR + YLH    L ++H+++K++NILLD E+ P+++D G+A    +  +        G+ GY +PE  M GQ+++KSDVYSFGV++LE+++G++  +S+    ++S   LV +A     +   L ++VD  L+  Y    + R   +  LC
Sbjct:  417 WAKRYKIIVGTARGILYLHHDSPLKIIHRDLKASNILLDAEMEPKVADFGMARIFRVDQSRADTRRVVGTHGYISPEYLMHGQFSVKSDVYSFGVLVLEIISGKR--NSNFHETDESGKNLVTYAWRHWRNGSPL-ELVDSELEKNYQSNEVFRCIHIALLC 575          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 4.701e-19
Identity = 55/132 (41.67%), Postives = 76/132 (57.58%), Query Frame = -2
Query:   82 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNAD--EALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDAL 468
            W+ R +I LG A+ L YLH  C   +VH++IK+ NIL+  +  P ++D GLA  +   D     N  AGS GY APE   S +   KSDVYS+GVV+LE+LTG++P D + P     LV W       ++ L
Sbjct:  890 WDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTVPE-GIHLVDWVRQNRGSLEVL 1020          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.140e-19
Identity = 54/159 (33.96%), Postives = 85/159 (53.46%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDA--GS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W  R++  +G+AR L YLH      ++H+++K+ NILLD     ++SD GL+   P+ D    + A  GS GY  PE     Q   KSDVYSFGVV+ E +  R   + + P+ + +L  WA       + L  ++D  L+G Y  +SL ++ ++   C
Sbjct:  615 WKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDFGLSKAGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVINPTLPKDQINLAEWALSWQKQRN-LESIIDSNLRGNYSPESLEKYGEIAEKC 772          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.140e-19
Identity = 56/141 (39.72%), Postives = 86/141 (60.99%), Query Frame = -2
Query:   55 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND-AGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVR-WATPQLHDIDALAKMVDPALK 468
            W+ R+ I LGTA  L YLH    + ++H++IK++N+LLD++LNP+++D GLA         L+   AG+ GY APE  + GQ   K+DVYSFGV++LE+  G +  ++  P     L R W    L+ ++ L + +DP LK
Sbjct:  411 WSQRLNIILGTAEGLAYLHGGSPVRIIHRDIKTSNVLLDDQLNPKIADFGLARCFGLDKTHLSTGIAGTLGYMAPEYVVRGQLTEKADVYSFGVLVLEIACGTR-INAFVPETGHLLQRVW---NLYTLNRLVEALDPCLK 547          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.140e-19
Identity = 54/144 (37.50%), Postives = 88/144 (61.11%), Query Frame = -2
Query:   55 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND----AGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATP--QLHDIDALAKMVDPALK 468
            W  R  I  G  R L YLH+   L+++H++IK++NILLD ++NP+++D G+A N    D+  +N        GY  PE    GQ++ KSDVYSFGV++LE++ G+K  +SS  +++ S     T   +L + D+   ++DPA++
Sbjct:  425 WKRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNF-RVDQTEDNTRRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGKK--NSSFYKIDDSGGNLVTHVWRLWNNDSPLDLIDPAIE 565          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 8.019e-19
Identity = 51/120 (42.50%), Postives = 72/120 (60.00%), Query Frame = -2
Query:  115 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNN--DAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRW 468
            W  R+KIA+  A  L YLH   S+ ++H++IK+ANILLD  L  +++D G +  +P   E L        GY  PE   +G  N KSDVYSFGVV++ELL+G+K     RP+  + LV +
Sbjct:  505 WEHRLKIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDVNLTAKVADFGASRLIPMDKEELETMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFKRPQSSKHLVSY 624          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 8.019e-19
Identity = 57/159 (35.85%), Postives = 90/159 (56.60%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND--AGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W +R+KI + +A+ LEYLH  C   +VH+++K+ NILL+  L+ +L+D GL+ + P   E   +   AG+ GY  PE   +   N KSDVYSFG+V+LE++T +   + SR +    +  W    L   D +  ++DP L G Y   S+ R  ++   C
Sbjct:  688 WETRLKIVVESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHLHAKLADFGLSRSFPIEGETHVSTVVAGTPGYLDPEYYRTNWLNEKSDVYSFGIVLLEIITNQLVINQSREK--PHIAEWVGLMLTKGD-IQNIMDPKLYGDYDSGSVWRAVELAMSC 843          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 8.019e-19
Identity = 46/104 (44.23%), Postives = 69/104 (66.35%), Query Frame = -2
Query:  166 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS--NMPNADEALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGR 468
            W+ R +I  G AR L YLHE   L ++H+++K++NILLD  +NP+++D G+A   NM           G+ GY APE   +  +++K+DVYSFGVV+LE++TGR
Sbjct:  435 WDMRARIIEGVARGLVYLHEDSQLRIIHRDLKASNILLDAYMNPKVADFGMARLFNMDQTRAVTRKVVGTFGYMAPEYVRNRTFSVKTDVYSFGVVLLEMITGR 538          
The following BLAST results are available for this feature:
BLAST of CV712163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
RLK7_ARATH3.599e-1935.85Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
PEPR1_ARATH3.599e-1938.46Leucine-rich repeat receptor-like protein kinase P... [more]
CRK33_ARATH3.599e-1935.19Putative cysteine-rich receptor-like protein kinas... [more]
RCH2_ARATH4.701e-1941.67Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
Y1357_ARATH6.140e-1933.96Probable receptor-like protein kinase At1g30570 OS... [more]
CRK42_ARATH6.140e-1939.72Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
CRK32_ARATH6.140e-1937.50Putative cysteine-rich receptor-like protein kinas... [more]
WAK1_ARATH8.019e-1942.50Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]
RLK6_ARATH8.019e-1935.85Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
CRK38_ARATH8.019e-1944.23Cysteine-rich receptor-like protein kinase 38 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001A05_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712163 ID=CV712163; Name=CV712163; organism=Citrus sinensis; type=EST; length=472bp
ACAAAGAGCAATGACATCTGCAAAACGGGAGAGAGATTTGACTGGGTAGA
GCCCTTTGAGTGCGGGATCAACCATTTTAGCAAGGGCATCAATGTCATGG
AGCTGAGGAGTTGCCCATCGAACCAAAGATTGCTCCAATCTTGGCCTCGA
GCTATCAAATGGTTTACGTCCAGTAAGAAGCTCCAGCATAACAACCCCAA
AACTGTAGACATCACTTTTTATATTATATTGACCAGACATGGCAACCTCA
GGTGCACCATATCCAGAACCAGCATCATTGTTCAATGCCTCATCTGCATT
TGGCATATTGCTTGCCAGGCCACAGTCAGAAAGTTGAGGATTGAGCTCGT
TGTCCAGTAATATGTTGGCCGACTTAATATTTTTGTGAACAACTGACAGT
GAGCAGACTTCATGCAGGTACTCCAGTGCTCGTGCAGTCCCCAAAGCAAT
CTTGACACGGGAGTTCCATATC
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