CV712163

Overview
NameCV712163
Unique NameCV712163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length472
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.047e-18
Identity = 54/159 (33.96%), Postives = 86/159 (54.09%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS--NMPNADEALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W  R KI  GTAR + YLH+    +++H+++K+ NILLD  +NP+++D G A    M  +     N AG+ GY APE    G++++KSDVYS+GV++LE++ G++    S P        W   +L        +VD  +   Y  + + R   +  LC
Sbjct:  454 WKKRYKIIGGTARGILYLHQDSQPTIIHRDLKAGNILLDAHMNPKVADFGTARIFGMDQSVAITANAAGTPGYMAPEYMELGEFSMKSDVYSYGVLVLEIICGKRNTSFSSPVQNFVTYVW---RLWKSGTPLNLVDATIAENYKSEEVIRCIHIALLC 609          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 3.980e-18
Identity = 53/163 (32.52%), Postives = 99/163 (60.74%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND----AGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLE---QSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W  R  I  G  R + YLH+   L ++H+++K++NILLD ++NP+++D G+A  +   D+ + N        GY +PE    GQ+++KSDVYSFGV++LE+++G+K  +SS  +++    +LV +   +L +  +L +++DP +   +  + + R+  +  LC
Sbjct:  435 WTMRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGMA-RIFGVDQTVANTGRVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGKK--NSSFYQMDGLVNNLVTYVW-KLWENKSLHELLDPFINQDFTSEEVIRYIHIGLLC 593          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 6.788e-18
Identity = 55/159 (34.59%), Postives = 88/159 (55.35%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND--AGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W +R++IA+  A+ LEYLH  C+  +VH+++K+ NILL+     +L+D GL+ + P   E+  +   AG+ GY  PE   +   + KSDVYSFGVV+LE++T +   D +R R    +  W    L   D +  ++DP L G Y      +  ++   C
Sbjct:  661 WENRMQIAVEAAQGLEYLHNGCTPPMVHRDVKTTNILLNERYGAKLADFGLSRSFPVDGESHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVTDKTRERTH--INEWVGSMLTKGD-IKSILDPKLMGDYDTNGAWKIVELALAC 816          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 6.788e-18
Identity = 53/133 (39.85%), Postives = 79/133 (59.40%), Query Frame = -2
Query:   91 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMP--NADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRW---ATPQ--LHDI 468
            W  R+++A+  A  L YLH   S+ ++H++IK+ANILLD  L  +++D G +  +P    D A       GY  PE   +G  N KSDVYSFGVV++ELL+G+K     RP+  + +V +   AT +  LH+I
Sbjct:  506 WEHRLRMAVEIAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASRLIPMDKEDLATMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFERPQTSKHIVSYFASATKENRLHEI 638          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 6.788e-18
Identity = 48/106 (45.28%), Postives = 71/106 (66.98%), Query Frame = -2
Query:  163 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEA---LNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRK 468
            W  R +I  G AR L YLHE   L ++H+++K++NILLD E+NP+++D G A  + ++DE        AG+ GY APE    GQ + KSDVYSFGV++LE+++G +
Sbjct:  449 WEMRYRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTA-RLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGER 553          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: ACCR1_ARATH (Serine/threonine-protein kinase-like protein CCR1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 6.788e-18
Identity = 59/158 (37.34%), Postives = 84/158 (53.16%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGL--ASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W+ R+KIA+ TA+ LEYLH      ++H ++KS+N+LLD+E   +++D GL  +SN  N D                       IK DVY FGVV+LE+LTGRK +D  R      +V W  P + +  A A +VD  +     V+ L + ADV  LC
Sbjct:  616 WSLRIKIAMQTAKGLEYLHNEAEPRIIHGDVKSSNVLLDSEWVARVADFGLVTSSNEKNLD-----------------------IKRDVYDFGVVLLEILTGRKRYD--RDCDPPEIVEWTVPVIREGKA-AAIVDTYIALPRNVEPLLKLADVAELC 747          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y3804_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS=Arabidopsis thaliana GN=At3g28040 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 8.866e-18
Identity = 49/110 (44.55%), Postives = 68/110 (61.82%), Query Frame = -2
Query:  154 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNAD-EALNNDA---GSGYGAPEVAMSG-QYNIKSDVYSFGVVMLELLTGRKPFD 468
            W+ R KI LGTA+ L YLH     + +H N+K  NILLD + NP++SD GL+  +   D   +NN+      GY APE+     + N K DVY FGV++LEL+TGR+P +
Sbjct:  825 WDVRYKIILGTAKGLAYLHHTFRPTTIHFNLKPTNILLDEKNNPKISDFGLSRLLTTQDGNTMNNNRFQNALGYVAPELECQNLRVNEKCDVYGFGVLILELVTGRRPVE 934          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 8.866e-18
Identity = 49/121 (40.50%), Postives = 72/121 (59.50%), Query Frame = -2
Query:  112 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNN-DAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWA 468
            W  R+ IA   AR L +LH  C  S+VH+++K++N+LLD   N +++D GLA  +   D  ++   AG+ GY APE   + Q   + DVYS+GV+ +EL TGR+  D      E+ LV WA
Sbjct:  912 WKKRIDIATDVARGLVFLHHECYPSIVHRDVKASNVLLDKHGNARVTDFGLARLLNVGDSHVSTVIAGTIGYVAPEYGQTWQATTRGDVYSYGVLTMELATGRRAVDGG----EECLVEWA 1028          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 8.866e-18
Identity = 48/106 (45.28%), Postives = 71/106 (66.98%), Query Frame = -2
Query:  163 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEA---LNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRK 468
            W  R +I  G AR L YLHE   L ++H+++K++NILLD E+NP+++D G A  + ++DE        AG+ GY APE    GQ + KSDVYSFGV++LE+++G +
Sbjct:  444 WEVRFRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTA-RLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGER 548          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 1.158e-17
Identity = 54/161 (33.54%), Postives = 90/161 (55.90%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASN--MPNADEALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATP--QLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W  R  I  G  R + YLH+   L+++H+++K+ NILLD ++NP++ D G+A N  +   +       G+ GY  PE   +GQ++ KSDVYSFGV++LE++ G+K  +SS    + S+    T   +L + + L ++VD  +   Y    + R   +  LC
Sbjct:  408 WTRRYNIINGITRGIVYLHQDSRLTIIHRDLKAGNILLDADMNPKIVDFGVARNFRVDQTEATTARVVGTIGYMPPEYVTNGQFSTKSDVYSFGVLILEIIGGKK--NSSINETDGSISNLVTYVWRLWNNEPLLELVDAPMGENYDRNEVIRCIHIGLLC 566          
The following BLAST results are available for this feature:
BLAST of CV712163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
CRK13_ARATH3.047e-1833.96Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
CRK18_ARATH3.980e-1832.52Cysteine-rich receptor-like protein kinase 18 OS=A... [more]
Y5188_ARATH6.788e-1834.59Probable LRR receptor-like serine/threonine-protei... [more]
WAK4_ARATH6.788e-1839.85Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]
CRK39_ARATH6.788e-1845.28Putative cysteine-rich receptor-like protein kinas... [more]
ACCR1_ARATH6.788e-1837.34Serine/threonine-protein kinase-like protein CCR1 ... [more]
Y3804_ARATH8.866e-1844.55Probably inactive leucine-rich repeat receptor-lik... [more]
Y1743_ARATH8.866e-1840.50Probable LRR receptor-like serine/threonine-protei... [more]
CRK40_ARATH8.866e-1845.28Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
CRK24_ARATH1.158e-1733.54Cysteine-rich receptor-like protein kinase 24 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001A05_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712163 ID=CV712163; Name=CV712163; organism=Citrus sinensis; type=EST; length=472bp
ACAAAGAGCAATGACATCTGCAAAACGGGAGAGAGATTTGACTGGGTAGA
GCCCTTTGAGTGCGGGATCAACCATTTTAGCAAGGGCATCAATGTCATGG
AGCTGAGGAGTTGCCCATCGAACCAAAGATTGCTCCAATCTTGGCCTCGA
GCTATCAAATGGTTTACGTCCAGTAAGAAGCTCCAGCATAACAACCCCAA
AACTGTAGACATCACTTTTTATATTATATTGACCAGACATGGCAACCTCA
GGTGCACCATATCCAGAACCAGCATCATTGTTCAATGCCTCATCTGCATT
TGGCATATTGCTTGCCAGGCCACAGTCAGAAAGTTGAGGATTGAGCTCGT
TGTCCAGTAATATGTTGGCCGACTTAATATTTTTGTGAACAACTGACAGT
GAGCAGACTTCATGCAGGTACTCCAGTGCTCGTGCAGTCCCCAAAGCAAT
CTTGACACGGGAGTTCCATATC
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