CV712163

Overview
NameCV712163
Unique NameCV712163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length472
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: CRK22_ARATH (Cysteine-rich receptor-like protein kinase 22 OS=Arabidopsis thaliana GN=CRK22 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.280e-16
Identity = 49/162 (30.25%), Postives = 95/162 (58.64%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND---AGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKP---FDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W  R KI  G A+ + +LH+   L++++++ K++NILLD ++NP++SD G+A+     +   N +       Y +PE A+ G++++KSDVYSFG+++LE+++G+K    + +       +LV +A  +L    +  K++D ++   Y    ++R   +  LC
Sbjct:  449 WTRRYKIIGGIAQGILHLHQDPQLTIIYRDFKASNILLDADMNPKISDFGMATVFGMEESRGNTNWIAETFVYMSPEYAVHGKFSMKSDVYSFGILILEIISGKKNSSLYQNDETTTAGNLVTYAW-RLWRNGSQLKLLDSSIGRNYQSNEVTRCIHIALLC 609          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: WAKLR_ARATH (Wall-associated receptor kinase-like 21 OS=Arabidopsis thaliana GN=WAKL21 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.672e-16
Identity = 51/142 (35.92%), Postives = 80/142 (56.34%), Query Frame = -2
Query:   58 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNN-----DAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPAL 468
            W  R+ IA  TA A+ +LH   +  + H++IKS+NILLD+E N ++SD GL+    + D   ++         GY  P+     Q + KSDVYSFGVV++E+++G K  D +RP  E +L   A  ++     +  ++DP L
Sbjct:  408 WQLRLAIACQTANAIAHLHSSVNPPIYHRDIKSSNILLDHEFNSKISDFGLSRLGMSTDFEASHISTAPQGTPGYLDPQYHQDFQLSDKSDVYSFGVVLVEIISGFKVIDFTRPYSEVNLASLAVDRI-GRGRVVDIIDPCL 548          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: WAKLO_ARATH (Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 1.672e-16
Identity = 50/139 (35.97%), Postives = 78/139 (56.12%), Query Frame = -2
Query:   58 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS-NMPNADEALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPAL 468
            W  R+ +A  TA+A+ YLH   +  + H++IKS NILLD + N +++D GL+   M  +        G+ GY  P+       + KSDVYSFGVV+ E++TG K  D +RP  E +L   A  ++     + +++DP L
Sbjct:  443 WTLRLTVATQTAKAIAYLHSSMNPPIYHRDIKSTNILLDYDFNSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQCFHLSDKSDVYSFGVVLAEIITGLKVVDFTRPHTEINLAALAVDKIGS-GCIDEIIDPIL 580          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.672e-16
Identity = 46/120 (38.33%), Postives = 67/120 (55.83%), Query Frame = -2
Query:  115 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGS--GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRW 468
            WN R++IA+  A AL YLH   S  + H+++KS NI+LD +   ++SD G +  +      L        GY  PE   S Q+  KSDVYSFGVV++EL+TG K     R +  ++L  +
Sbjct:  544 WNIRLRIAIDIAGALSYLHSSASSPIYHRDVKSTNIMLDEKYRAKVSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLVELITGEKSISFLRSQENRTLATY 663          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y3288_ARATH (Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana GN=At3g02880 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.184e-16
Identity = 54/142 (38.03%), Postives = 76/142 (53.52%), Query Frame = -2
Query:   43 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYP 468
            W +R  IALG ARA+ YLH     +  H NIKS+NILL +    ++SD GLA  + +       D   GY APE+  + + + K+DVYSFGV++LELLTG+ P           L RW    + +    + ++DP L    P
Sbjct:  442 WETRAGIALGAARAISYLHSRDG-TTSHGNIKSSNILLSDSYEAKVSDYGLAPIISSTSAPNRID---GYRAPEITDARKISQKADVYSFGVLILELLTGKSPTHQQLNEEGVDLPRW-VQSVTEQQTPSDVLDPELTRYQP 578          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 2.184e-16
Identity = 47/116 (40.52%), Postives = 68/116 (58.62%), Query Frame = -2
Query:  127 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGS--GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQS 468
            W  R+ IA+  A AL YLH   S  + H++IK+ NILLD +   ++SD G + ++      L        GY  PE   S ++  KSDVYSFGVV++EL+TG+ P  SSR + E++
Sbjct:  520 WEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTDKSDVYSFGVVLVELITGKNP--SSRVQSEEN 633          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.852e-16
Identity = 53/159 (33.33%), Postives = 86/159 (54.09%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND--AGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W +R+KI + +A+ LEYLH  C   +VH+++K+ NILL+     +L+D GL+ +     E   +   AG+ GY  PE   +     KSDVYSFG+++LE++T R   D SR +    +  W    L   D +  ++DP+L   Y   S+ +  ++   C
Sbjct:  674 WGTRLKIVIESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHFEAKLADFGLSRSFLIEGETHVSTVVAGTPGYLDPEYHRTNWLTEKSDVYSFGILLLEIITNRHVIDQSREK--PHIGEWVGVMLTKGD-IQSIMDPSLNEDYDSGSVWKAVELAMSC 829          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 2.852e-16
Identity = 46/105 (43.81%), Postives = 62/105 (59.05%), Query Frame = -2
Query:  160 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASN--MPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKP 468
            W  R++IA+  A AL YLH   S  + H++IKS NILLD +   ++SD G + +  + +           GY  PE   S QY  KSDVYSFGVV++EL+TG KP
Sbjct:  547 WGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRTKVSDFGTSRSVTIDHTHWTTVISGTVGYVDPEYYGSSQYTDKSDVYSFGVVLVELITGEKP 651          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.852e-16
Identity = 51/158 (32.28%), Postives = 82/158 (51.90%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGS--GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W  R++IA+  A AL YLH   S  + H++IKS NI+LD +   ++SD G +  +      L        GY  PE   S Q+  KSDVYSFGVV+ EL+TG K     R +  ++L  + T  + + + L+ ++D  ++    +  ++  A +   C
Sbjct:  530 WEVRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNIMLDEKHRAKVSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLAELITGEKSVSFLRSQEYRTLATYFTLAMKE-NRLSDIIDARIRDGCKLNQVTAAAKIARKC 686          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: PUB33_ARATH (U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 2.852e-16
Identity = 59/159 (37.11%), Postives = 84/159 (52.83%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNM-PNADEALNNDAGS--GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W +RV+IA     AL +LH   + S+VH ++K ANILLD+ L  +LSD G  S + PN  +++  D      Y  PE + SG+   KSDVYSFG+++L LLTGR     S        V++A     D   L  ++DP L G +P     + A +   C
Sbjct:  574 WQNRVRIATEICAALVFLHSNKAHSLVHGDLKPANILLDSNLVSKLSDFGTCSLLHPNGSKSVRTDVTGTVAYLDPEASSSGELTPKSDVYSFGIILLRLLTGRPALRISNE------VKYAL----DNGTLNDLLDP-LAGDWPFVQAEQLARLALRC 721          
The following BLAST results are available for this feature:
BLAST of CV712163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
CRK22_ARATH1.280e-1630.25Cysteine-rich receptor-like protein kinase 22 OS=A... [more]
WAKLR_ARATH1.672e-1635.92Wall-associated receptor kinase-like 21 OS=Arabido... [more]
WAKLO_ARATH1.672e-1635.97Wall-associated receptor kinase-like 14 OS=Arabido... [more]
WAKLH_ARATH1.672e-1638.33Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
Y3288_ARATH2.184e-1638.03Probable inactive receptor kinase At3g02880 OS=Ara... [more]
WAKLD_ARATH2.184e-1640.52Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
Y5182_ARATH2.852e-1633.33Probable LRR receptor-like serine/threonine-protei... [more]
WAKLK_ARATH2.852e-1643.81Putative wall-associated receptor kinase-like 11 O... [more]
WAKLJ_ARATH2.852e-1632.28Wall-associated receptor kinase-like 10 OS=Arabido... [more]
PUB33_ARATH2.852e-1637.11U-box domain-containing protein 33 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001A05_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712163 ID=CV712163; Name=CV712163; organism=Citrus sinensis; type=EST; length=472bp
ACAAAGAGCAATGACATCTGCAAAACGGGAGAGAGATTTGACTGGGTAGA
GCCCTTTGAGTGCGGGATCAACCATTTTAGCAAGGGCATCAATGTCATGG
AGCTGAGGAGTTGCCCATCGAACCAAAGATTGCTCCAATCTTGGCCTCGA
GCTATCAAATGGTTTACGTCCAGTAAGAAGCTCCAGCATAACAACCCCAA
AACTGTAGACATCACTTTTTATATTATATTGACCAGACATGGCAACCTCA
GGTGCACCATATCCAGAACCAGCATCATTGTTCAATGCCTCATCTGCATT
TGGCATATTGCTTGCCAGGCCACAGTCAGAAAGTTGAGGATTGAGCTCGT
TGTCCAGTAATATGTTGGCCGACTTAATATTTTTGTGAACAACTGACAGT
GAGCAGACTTCATGCAGGTACTCCAGTGCTCGTGCAGTCCCCAAAGCAAT
CTTGACACGGGAGTTCCATATC
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