CV712163

Overview
NameCV712163
Unique NameCV712163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length472
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: IRAK3_MOUSE (Interleukin-1 receptor-associated kinase 3 OS=Mus musculus GN=Irak3 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 2.852e-16
Identity = 43/109 (39.45%), Postives = 68/109 (62.39%), Query Frame = -2
Query:  163 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALN--NDAGSG-----YGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRK 468
            W+ R+ + +G A+A++YLH     +V+  N+ SANILLD++L P+L+D   A   PN ++  +  N  G G     Y   E    G+ ++K+DVYSFG+V++E+LTG K
Sbjct:  277 WHVRISVLIGIAKAIQYLHNTQPCAVICGNVSSANILLDDQLQPKLTDFAAAHFRPNLEQQSSTINMTGGGRKHLWYMPEEYIRQGRLSVKTDVYSFGIVIMEVLTGCK 385          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: CCR35_ARATH (Serine/threonine-protein kinase-like protein At3g51990 OS=Arabidopsis thaliana GN=At3g51990 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.852e-16
Identity = 49/127 (38.58%), Postives = 78/127 (61.42%), Query Frame = -2
Query:  100 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND--AGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQS-LVRWATPQL 468
            W+ R+KIAL  A+A+  LH      ++H++IKSAN+L+D  LN +L D GLA      D+ + +   AG+ GY  P+   + + + K+DV+SFG+++LE+++GRK  D    R   S +V WA P +
Sbjct:  157 WSKRIKIALQIAKAVHLLHSQ-ETPIIHRDIKSANVLMDKNLNAKLGDFGLAIRCNVDDQKVKSTPPAGTMGYLDPDYVTADRLSTKTDVFSFGILLLEIISGRKAID---VRYSPSFIVDWAIPMI 279          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y1699_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS=Arabidopsis thaliana GN=At1g69990 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 3.725e-16
Identity = 46/128 (35.94%), Postives = 75/128 (58.59%), Query Frame = -2
Query:  100 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCG---LASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKP--FDSSRPRLEQSLVRWATPQL 468
            W +RV++A+G AR L +LH  C    +H+ I S  ILLD + + ++ D G   L S+  + D + +N    GY APE + +   ++  DVY FG+V+LE++TG+KP   ++     ++SLV W +  L
Sbjct:  387 WPTRVRVAVGAARGLAWLHHGCQPLYMHQYISSNVILLDEDFDARVIDYGLGKLVSSQDSKDSSFSN-GKFGYVAPEYSSTMVASLSGDVYGFGIVLLEIVTGQKPVLINNGEEGFKESLVEWVSKHL 513          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 3.725e-16
Identity = 48/107 (44.86%), Postives = 62/107 (57.94%), Query Frame = -2
Query:  160 IWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGS---GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKP 471
            IW  R++IA+  A AL YLH   S  + H++IKS NILLD +   +++D G  S     D+       S   GY  PE   S QY  KSDVYSFGV++ EL+TG KP
Sbjct:  540 IWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRAKVADFG-TSRSVTIDQTHWTTVISGTVGYVDPEYYRSSQYTEKSDVYSFGVILAELITGDKP 645          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: IRAK4_BOVIN (Interleukin-1 receptor-associated kinase 4 OS=Bos taurus GN=IRAK4 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 3.725e-16
Identity = 56/143 (39.16%), Postives = 79/143 (55.24%), Query Frame = -2
Query:   85 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGSG---YGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSR-PRL-----------EQSLVRWATPQLHDIDA 468
            WN R KIA G A  L YLHE      +H++IKSANILLD +   ++SD GLA       + +      G   Y APE A+ G+   KSD+YSFGVV+LE++TG    D  R P+L           E+++  +   +++DID+
Sbjct:  286 WNMRCKIAQGAANGLSYLHENHH---IHRDIKSANILLDEDFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYVDRKMNDIDS 424          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y3475_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 4.865e-16
Identity = 44/108 (40.74%), Postives = 65/108 (60.19%), Query Frame = -2
Query:  160 RVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNAD-EALNNDAGS-------GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKP 459
            R+ IA+  A  L+YLH  C   + H ++K +N+LLD++L   +SD GLA  +   D E+  N   S       GY APE  + GQ +I  DVYSFG+++LE+ TG++P
Sbjct:  813 RLNIAIDVASVLDYLHVHCHEPIAHCDLKPSNVLLDDDLTAHVSDFGLARLLLKFDEESFFNQLSSAGVRGTIGYAAPEYGVGGQPSINGDVYSFGILLLEMFTGKRP 920          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 6.353e-16
Identity = 52/160 (32.50%), Postives = 79/160 (49.38%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND----AGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W  R++I +G AR L+YLH     +++H++IK+ NILLD     ++SD GL+   P +    +         GY  PE         KSDVYSFGVV+LE+L  R     S P  +  L+RW     +    + +++D  L       SL +F ++   C
Sbjct:  617 WKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQVLTEKSDVYSFGVVLLEVLCCRPIRMQSVPPEQADLIRWVKSN-YRRGTVDQIIDSDLSADITSTSLEKFCEIAVRC 775          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y5659_ARATH (Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana GN=At5g16590 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 6.353e-16
Identity = 53/137 (38.69%), Postives = 73/137 (53.28%), Query Frame = -2
Query:   58 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPAL 468
            W +R  IALG ARA+ YLH     +  H NIKS+NILL      ++SD  LA   P        +   GY APEV  + + + K+DVYSFGV++LELLTG+ P           L RW +  + +  + + + DP L
Sbjct:  440 WETRANIALGAARAISYLHSR-DATTSHGNIKSSNILLSESFEAKVSDYCLA---PMISPTSTPNRIDGYRAPEVTDARKISQKADVYSFGVLILELLTGKSPTHQQLHEEGVDLPRWVS-SITEQQSPSDVFDPEL 571          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 6.353e-16
Identity = 50/118 (42.37%), Postives = 70/118 (59.32%), Query Frame = -2
Query:  115 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRW 468
            W++R++IA+  AR L +LH   S  +VH NIK++NILL    +  +SD GL     N+      +  +GY APEV  + +   KSDVYSFGV++LELLTG+ P  +S       L RW
Sbjct:  448 WDNRMRIAITAARGLAHLH--VSAKLVHGNIKASNILLHPNQDTCVSDYGLNQLFSNSSPP---NRLAGYHAPEVLETRKVTFKSDVYSFGVLLLELLTGKSPNQASLGEEGIDLPRW 560          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 8.298e-16
Identity = 47/107 (43.93%), Postives = 62/107 (57.94%), Query Frame = -2
Query:  160 IWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGS---GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKP 471
            +W  R++IA+  A AL YLH   S  + H++IKS NILLD +   +++D G  S     D+       S   GY  PE   S QY  KSDVYSFGV++ EL+TG KP
Sbjct:  549 LWGMRLRIAVDIAGALSYLHSSASSPIYHRDIKSTNILLDEKYRAKVADFG-TSRSVTIDQTHWTTVISGTVGYVDPEYYQSSQYTEKSDVYSFGVILAELITGDKP 654          
The following BLAST results are available for this feature:
BLAST of CV712163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
IRAK3_MOUSE2.852e-1639.45Interleukin-1 receptor-associated kinase 3 OS=Mus ... [more]
CCR35_ARATH2.852e-1638.58Serine/threonine-protein kinase-like protein At3g5... [more]
Y1699_ARATH3.725e-1635.94Probable LRR receptor-like serine/threonine-protei... [more]
WAKLM_ARATH3.725e-1644.86Wall-associated receptor kinase-like 17 OS=Arabido... [more]
IRAK4_BOVIN3.725e-1639.16Interleukin-1 receptor-associated kinase 4 OS=Bos ... [more]
Y3475_ARATH4.865e-1640.74Probable LRR receptor-like serine/threonine-protei... [more]
Y5900_ARATH6.353e-1632.50Putative receptor-like protein kinase At5g39000 OS... [more]
Y5659_ARATH6.353e-1638.69Probable inactive receptor kinase At5g16590 OS=Ara... [more]
Y2267_ARATH6.353e-1642.37Probable inactive receptor kinase At2g26730 OS=Ara... [more]
WAKLN_ARATH8.298e-1643.93Wall-associated receptor kinase-like 18 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001A05_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712163 ID=CV712163; Name=CV712163; organism=Citrus sinensis; type=EST; length=472bp
ACAAAGAGCAATGACATCTGCAAAACGGGAGAGAGATTTGACTGGGTAGA
GCCCTTTGAGTGCGGGATCAACCATTTTAGCAAGGGCATCAATGTCATGG
AGCTGAGGAGTTGCCCATCGAACCAAAGATTGCTCCAATCTTGGCCTCGA
GCTATCAAATGGTTTACGTCCAGTAAGAAGCTCCAGCATAACAACCCCAA
AACTGTAGACATCACTTTTTATATTATATTGACCAGACATGGCAACCTCA
GGTGCACCATATCCAGAACCAGCATCATTGTTCAATGCCTCATCTGCATT
TGGCATATTGCTTGCCAGGCCACAGTCAGAAAGTTGAGGATTGAGCTCGT
TGTCCAGTAATATGTTGGCCGACTTAATATTTTTGTGAACAACTGACAGT
GAGCAGACTTCATGCAGGTACTCCAGTGCTCGTGCAGTCCCCAAAGCAAT
CTTGACACGGGAGTTCCATATC
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