CV712163

Overview
NameCV712163
Unique NameCV712163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length472
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: YR818_MIMIV (Putative serine/threonine-protein kinase/receptor R818 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R818 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.465e-12
Identity = 38/124 (30.65%), Postives = 70/124 (56.45%), Query Frame = -2
Query:  100 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSR-PRLEQSLVRWATPQL 468
            W  ++K+   TA  + YLH    + ++H++IK +NIL+D+ +N +++D G A  +   +  +       + APE+    +Y  K DV+SFG+VM E+LT ++PF      ++   ++  A PQ+
Sbjct: 1487 WKLKIKMLYQTALGIGYLHNSDPI-IIHRDIKPSNILVDDSMNVKIADFGFA-RIKEENSVMTRCGTPCWTAPEIIRGEKYTEKVDVFSFGIVMWEVLTCKEPFSGCNFMKVSMDILEGARPQI 1608          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: RLK_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RLK OS=Arabidopsis thaliana GN=RLK PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.465e-12
Identity = 44/127 (34.65%), Postives = 71/127 (55.91%), Query Frame = -2
Query:   91 WNSRVKIALGTARALEYLHE-VCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDI 468
            W +R+KI  G A+ L YLH+ + SL   H ++KS+N+LL     P L+D GL   + N ++A  + A   Y +PE     +   K+DV+  G+++LE+LTG+ P + S+   E+ L  W     H +
Sbjct:  455 WPTRLKIVKGVAKGLFYLHQDLPSLMAPHGHLKSSNVLLTKTFEPLLTDYGLIP-LINQEKAQMHMAA--YRSPEYLQHRRITKKTDVWGLGILILEILTGKFPANFSQSS-EEDLASWVNSGFHGV 577          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y9963_DICDI (Probable serine/threonine-protein kinase DDB_G0272254 OS=Dictyostelium discoideum GN=DDB_G0272254 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.913e-12
Identity = 39/121 (32.23%), Postives = 69/121 (57.02%), Query Frame = -2
Query:   94 IALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLV--RWATPQLHD 450
            IA   AR +++LH   + +++H+++KS+N+L+D   N +++D G+A    +  + +       + APE+     YN K+DVYS+ +V+ ELLTG +P+    P     LV  +   P+L D
Sbjct: 1180 IAFDIARGMQHLH---TRNIIHRDLKSSNLLMDKHFNIKIADLGIARET-SFTQTMTTIGTVAWTAPEILRHESYNQKADVYSYAIVLYELLTGEEPYQGIPPMNAGILVASKGLRPELPD 1296          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y2165_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thaliana GN=At2g16250 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.913e-12
Identity = 46/141 (32.62%), Postives = 78/141 (55.32%), Query Frame = -2
Query:   58 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQYN--IKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQL--HDIDALAKMVDPAL 468
            W +R+KIALG A  L YLH  CS  +VH+++++++ILLD++   +L     A    +A ++  +       + E + SG  N     DVY FG V+LEL+TG+    S    L +  +  A P +  ++ + + K++DP+L
Sbjct:  628 WITRLKIALGAAEGLSYLHHECSPPLVHRDVQASSILLDDKFEVRLGSLSEAYAQGDAYQSRISRLLRLPQSSEPSSSGVTNAICSYDVYCFGKVLLELVTGKLGISSPDNALAKEYMEEALPYISTNEKELVTKILDPSL 768          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: IRAK1_MOUSE (Interleukin-1 receptor-associated kinase 1 OS=Mus musculus GN=Irak1 PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 1.913e-12
Identity = 43/112 (38.39%), Postives = 65/112 (58.04%), Query Frame = -2
Query:  163 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA--SNMPNADEALNNDAGS--------GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRK 468
            W  R+ I LGTARA+++LH+  S S++H +IKS+N+LLD  L P+L D GLA  S    A  + ++             Y   E   +G+  + +D +SFGVV+LE L G++
Sbjct:  312 WPQRLDILLGTARAIQFLHQD-SPSLIHGDIKSSNVLLDERLMPKLGDFGLARFSRFAGAKASQSSTVARTSTVRGTLAYLPEEYIKTGRLAVDTDTFSFGVVILETLAGQR 422          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: IRAK1_HUMAN (Interleukin-1 receptor-associated kinase 1 OS=Homo sapiens GN=IRAK1 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.913e-12
Identity = 43/112 (38.39%), Postives = 64/112 (57.14%), Query Frame = -2
Query:  163 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLA-------SNMPNADEALNNDAGSG---YGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRK 468
            W  R+ I LGTARA+++LH+  S S++H +IKS+N+LLD  L P+L D GLA       S+   +          G   Y   E   +G+  + +D +SFGVV+LE L G++
Sbjct:  312 WPQRLDILLGTARAIQFLHQD-SPSLIHGDIKSSNVLLDERLTPKLGDFGLARFSRFAGSSPSQSSMVARTQTVRGTLAYLPEEYIKTGRLAVDTDTFSFGVVVLETLAGQR 422          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: HT1_ARATH (Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.913e-12
Identity = 39/105 (37.14%), Postives = 60/105 (57.14%), Query Frame = -2
Query:  142 VKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRP 456
            +++AL  +R +EYLH   S  V+H+++KS N+LL++E+  +++D G +       EA  N     + APE+     Y  K DVYSFG+V+ EL T   PF    P
Sbjct:  190 LRLALDISRGMEYLH---SQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETQCREAKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTP 291          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: YR826_MIMIV (Putative serine/threonine-protein kinase/receptor R826 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R826 PE=4 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 4.262e-12
Identity = 37/105 (35.24%), Postives = 64/105 (60.95%), Query Frame = -2
Query:  157 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGSG-YGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPF 468
            W+ ++KI +  A+ + YLH      ++H++IK +NIL+D   N +++D G A      + A+    G+  + APE+  +  Y+ K DV+SFG+VM E+LT ++PF
Sbjct: 1494 WHQKIKILVNIAKGISYLHSF-DPPIIHRDIKPSNILIDENWNVKIADFGFARI--KEENAIMTRCGTPCWTAPEIIRNDIYDEKVDVFSFGIVMWEVLTCKEPF 1595          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: SHKC_DICDI (Dual specificity protein kinase shkC OS=Dictyostelium discoideum GN=shkC PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 4.262e-12
Identity = 39/108 (36.11%), Postives = 64/108 (59.26%), Query Frame = -2
Query:  145 RVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGSG---YGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSR 459
            R+++A   A  + +LHE   +  VH++IKS+N+L+D  +  ++ D GL++         +  +  G   Y APEV M  ++N  SDVYSFG+V+ E+LT ++PF   R
Sbjct:  122 RMRMARDAALGINWLHESNPV-FVHRDIKSSNLLVDENMRVKICDFGLSALKQKHKMLKDQSSAKGTPLYMAPEVMMFKEFNESSDVYSFGIVLWEILTRKEPFSHHR 228          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y5720_ARATH (Probable inactive receptor kinase At5g67200 OS=Arabidopsis thaliana GN=At5g67200 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 5.566e-12
Identity = 45/117 (38.46%), Postives = 66/117 (56.41%), Query Frame = -2
Query:  133 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGSGYGAPEVAMSGQY-NIKSDVYSFGVVMLELLTG----RKPFDSSRPRLE 468
            W S +KIA   A+ L Y+H+  S ++VH N+KS NILL  +    L+D  L+    ++  + ++   S Y APE+  S +    K DVYSFGV++ ELLTG    R PF +    L+
Sbjct:  493 WTSCLKIAEDVAQGLYYIHQTSS-ALVHGNLKSTNILLGQDFEACLTDYCLSVLTDSSSASPDDPDSSSYKAPEIRKSSRRPTSKCDVYSFGVLIFELLTGKNASRHPFMAPHDMLD 608          
The following BLAST results are available for this feature:
BLAST of CV712163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
YR818_MIMIV1.465e-1230.65Putative serine/threonine-protein kinase/receptor ... [more]
RLK_ARATH1.465e-1234.65Probable LRR receptor-like serine/threonine-protei... [more]
Y9963_DICDI1.913e-1232.23Probable serine/threonine-protein kinase DDB_G0272... [more]
Y2165_ARATH1.913e-1232.62Probable LRR receptor-like serine/threonine-protei... [more]
IRAK1_MOUSE1.913e-1238.39Interleukin-1 receptor-associated kinase 1 OS=Mus ... [more]
IRAK1_HUMAN1.913e-1238.39Interleukin-1 receptor-associated kinase 1 OS=Homo... [more]
HT1_ARATH1.913e-1237.14Serine/threonine-protein kinase HT1 OS=Arabidopsis... [more]
YR826_MIMIV4.262e-1235.24Putative serine/threonine-protein kinase/receptor ... [more]
SHKC_DICDI4.262e-1236.11Dual specificity protein kinase shkC OS=Dictyostel... [more]
Y5720_ARATH5.566e-1238.46Probable inactive receptor kinase At5g67200 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001A05_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712163 ID=CV712163; Name=CV712163; organism=Citrus sinensis; type=EST; length=472bp
ACAAAGAGCAATGACATCTGCAAAACGGGAGAGAGATTTGACTGGGTAGA
GCCCTTTGAGTGCGGGATCAACCATTTTAGCAAGGGCATCAATGTCATGG
AGCTGAGGAGTTGCCCATCGAACCAAAGATTGCTCCAATCTTGGCCTCGA
GCTATCAAATGGTTTACGTCCAGTAAGAAGCTCCAGCATAACAACCCCAA
AACTGTAGACATCACTTTTTATATTATATTGACCAGACATGGCAACCTCA
GGTGCACCATATCCAGAACCAGCATCATTGTTCAATGCCTCATCTGCATT
TGGCATATTGCTTGCCAGGCCACAGTCAGAAAGTTGAGGATTGAGCTCGT
TGTCCAGTAATATGTTGGCCGACTTAATATTTTTGTGAACAACTGACAGT
GAGCAGACTTCATGCAGGTACTCCAGTGCTCGTGCAGTCCCCAAAGCAAT
CTTGACACGGGAGTTCCATATC
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