CV712163

Overview
NameCV712163
Unique NameCV712163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length472
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2407 contig Csv1_Contig2407:66..537. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 5.022e-21
Identity = 61/159 (38.36%), Postives = 88/159 (55.35%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDA--GS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W  R++I +G+AR L YLH   +  ++H+++K+ NILLD  L  ++SD GL+ + P  DE   + A  GS GY  PE     Q   KSDVYSFGVV+ E+L  R   +   PR + +L  +A   LH    L K++DP + G     SL +F +    C
Sbjct:  626 WKQRLEICIGSARGLHYLHTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLSKDAP-MDEGHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVINPQLPREQVNLAEYAM-NLHRKGMLEKIIDPKIVGTISKGSLRKFVEAAEKC 782          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 5.022e-21
Identity = 62/159 (38.99%), Postives = 87/159 (54.72%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDA--GS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W  R++I +G+AR L YLH   +  V+H+++KSANILLD  L  +++D GL+   P  D+   + A  GS GY  PE     Q   KSDVYSFGVVM E+L  R   D +  R   +L  WA  +      L  ++DP+L+G     SL +F +    C
Sbjct:  577 WKQRLEICIGSARGLHYLHTGDAKPVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVMFEVLCARPVIDPTLTREMVNLAEWAM-KWQKKGQLEHIIDPSLRGKIRPDSLRKFGETGEKC 734          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 5.022e-21
Identity = 61/159 (38.36%), Postives = 90/159 (56.60%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADE--ALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W +R++IA  TA+ LEYLH  C   ++H++IKS NILLDN    +L D GL+ + P   E     N AGS GY  PE   +     KSDV+SFGVV+LE++T +   D +R +    +  W   +L + D +  +VDP++ G Y   SL +  ++   C
Sbjct:  687 WENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQTREK--SHIGEWVGFKLTNGD-IKNIVDPSMNGDYDSSSLWKALELAMSC 842          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 5.022e-21
Identity = 50/121 (41.32%), Postives = 77/121 (63.64%), Query Frame = -2
Query:  115 IWNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND-AGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRW 471
            +W  R+ +AL  AR +EYLH +   S +H+++K +NILL +++  +++D GL    P    ++    AG+ GY APE A++G+   K DVYSFGV+++EL+TGRK  D S+P     LV W
Sbjct:  687 LWKQRLTLALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMELITGRKSLDESQPEESIHLVSW 807          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 5.022e-21
Identity = 52/120 (43.33%), Postives = 71/120 (59.17%), Query Frame = -2
Query:  115 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDAGS--GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRW 468
            W +R++IA G A  L YLH+ C   ++H++IKS+NILL +     L+D GLA  +   D  +  D     GY  PE   +     K DVYSFGVV+LELLTGR+P D  +PR  + L+ W
Sbjct:  840 WKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSDTFVAHLADFGLARLILPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMDVCKPRGSRDLISW 959          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 5.022e-21
Identity = 55/140 (39.29%), Postives = 89/140 (63.57%), Query Frame = -2
Query:   58 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS--NMPNADEALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPAL 468
            W  R KI  G AR + YLH+   L+++H+++K++NILLD ++NP+++D G+A    +   +E  +   G+ GY +PE AM GQY++KSDVYSFGV++LE+++G+K     +      LV +A   L       ++VDPA+
Sbjct:  433 WTRRYKIIGGVARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGLDQTEENTSRIVGTYGYMSPEYAMHGQYSMKSDVYSFGVLVLEIISGKKNSSFYQTDGAHDLVSYAW-GLWSNGRPLELVDPAI 571          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 6.560e-21
Identity = 58/146 (39.73%), Postives = 86/146 (58.90%), Query Frame = -2
Query:   49 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS---NMPNADEALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSL--VRWATPQLHDIDALAKMVDPALKGL 468
            W +R KIA+G A+ L YLH  C  +++H+++K  NILLD++    L+D GLA    N PN   A++  AGS GY APE   +     KSDVYS+GVV+LE+L+GR   +   P++   L  V W   ++   +    ++D  L+GL
Sbjct:  871 WETRYKIAIGAAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAILADFGLAKLMMNSPNYHNAMSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSGRSAVE---PQIGDGLHIVEWVKKKMGTFEPALSVLDVKLQGL 1013          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 6.560e-21
Identity = 62/159 (38.99%), Postives = 87/159 (54.72%), Query Frame = -2
Query:    1 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNNDA--GS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRLEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALC 468
            W  R++I +G AR L YLH   S  V+H+++KSANILLD     +++D GL+   P  D+   + A  GS GY  PE     Q   KSDVYSFGVV+ E+L  R   D + PR   +L  WA  +      L +++D +L+G     SL +FA+    C
Sbjct:  580 WKQRLEICIGAARGLHYLHTGDSKPVIHRDVKSANILLDENFMAKVADFGLSKTGPELDQTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVIDPTLPREMVNLAEWAM-KWQKKGQLDQIIDQSLRGNIRPDSLRKFAETGEKC 737          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 6.560e-21
Identity = 48/105 (45.71%), Postives = 75/105 (71.43%), Query Frame = -2
Query:  163 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLAS--NMPNADEALNNDAGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRK 468
            W  R K+  G AR + YLH+   L+++H+++K++NILLD ++NP+L+D GLA    M    E  +   G+ GY APE A+ GQ+++KSDVYSFGV++LE+++G+K
Sbjct:  433 WTRRYKVIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKLADFGLARIFGMDQTQENTSRIVGTFGYMAPEYAIHGQFSVKSDVYSFGVLVLEIISGKK 537          
BLAST of CV712163 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 6.560e-21
Identity = 63/147 (42.86%), Postives = 92/147 (62.59%), Query Frame = -2
Query:   55 WNSRVKIALGTARALEYLHEVCSLSVVHKNIKSANILLDNELNPQLSDCGLASNMPNADEALNND--AGS-GYGAPEVAMSGQYNIKSDVYSFGVVMLELLTGRKPFDSSRPRL-EQSLVRW----ATPQLHDI-DALAKMVDPALK 468
            W++R KIA+G+AR L +LH  CS  ++H+++KS+N+LLD  L  ++SD G+A  M   D  L+    AG+ GY  PE   S + + K DVYS+GVV+LELLTG++P DS  P   + +LV W    A  ++ D+ D      DPAL+
Sbjct:  980 WSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDS--PDFGDNNLVGWVKQHAKLRISDVFDPELMKEDPALE 1124          
The following BLAST results are available for this feature:
BLAST of CV712163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
Y5613_ARATH5.022e-2138.36Probable receptor-like protein kinase At5g61350 OS... [more]
Y5597_ARATH5.022e-2138.99Probable receptor-like protein kinase At5g59700 OS... [more]
Y4245_ARATH5.022e-2138.36Probable LRR receptor-like serine/threonine-protei... [more]
TMK1_ARATH5.022e-2141.32Probable receptor protein kinase TMK1 OS=Arabidops... [more]
PSKR1_DAUCA5.022e-2143.33Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
CRK10_ARATH5.022e-2139.29Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
Y1341_ARATH6.560e-2139.73Probable LRR receptor-like serine/threonine-protei... [more]
HERK_ARATH6.560e-2138.99Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
CRK15_ARATH6.560e-2145.71Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
BRI1_ARATH6.560e-2142.86Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_0001A05_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712163 ID=CV712163; Name=CV712163; organism=Citrus sinensis; type=EST; length=472bp
ACAAAGAGCAATGACATCTGCAAAACGGGAGAGAGATTTGACTGGGTAGA
GCCCTTTGAGTGCGGGATCAACCATTTTAGCAAGGGCATCAATGTCATGG
AGCTGAGGAGTTGCCCATCGAACCAAAGATTGCTCCAATCTTGGCCTCGA
GCTATCAAATGGTTTACGTCCAGTAAGAAGCTCCAGCATAACAACCCCAA
AACTGTAGACATCACTTTTTATATTATATTGACCAGACATGGCAACCTCA
GGTGCACCATATCCAGAACCAGCATCATTGTTCAATGCCTCATCTGCATT
TGGCATATTGCTTGCCAGGCCACAGTCAGAAAGTTGAGGATTGAGCTCGT
TGTCCAGTAATATGTTGGCCGACTTAATATTTTTGTGAACAACTGACAGT
GAGCAGACTTCATGCAGGTACTCCAGTGCTCGTGCAGTCCCCAAAGCAAT
CTTGACACGGGAGTTCCATATC
back to top