CV712162
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: IF4A_LODEL (ATP-dependent RNA helicase eIF4A OS=Lodderomyces elongisporus GN=TIF1 PE=3 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 5.579e-67 Identity = 122/185 (65.95%), Postives = 154/185 (83.24%), Query Frame = -2 Query: 199 LEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 753 LE+T KFMN PVRILVK+DELTLEGIKQ+++NVE E++K + L DLY+++++TQ+VIF NTR KV++LT+K+R + TVSA H D+ Q RD IM+EFRSGSSR+LI+TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT D M+ +I+KFY+ I E+P+++ L Sbjct: 211 LEVTTKFMNNPVRILVKKDELTLEGIKQYFINVEVEDYKFDCLVDLYDSISVTQAVIFCNTRSKVEFLTNKLREQKFTVSAIHADLPQGERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDKDVGMMREIEKFYSTQITEMPADIGSL 395
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: FAL1_YEAST (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae GN=FAL1 PE=1 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 1.623e-66 Identity = 120/185 (64.86%), Postives = 152/185 (82.16%), Query Frame = -2 Query: 199 LEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 753 LE+TRKFMN PV+ILVKRDE++LEGIKQ+ VNV+KEEWK +TLCD+Y++L ITQ VIF NT++KVDWL+ ++ + V + HGDM Q RD +M +FR+G SRVLI+TD+ ARGIDVQQVSLVINYDLP ENY+HRIGRSGRFGRKGVAINF+T+ D L +I+KFY++ I +P+N A+L Sbjct: 214 LEVTRKFMNDPVKILVKRDEISLEGIKQYVVNVDKEEWKFDTLCDIYDSLTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKADLAKLREIEKFYSIKINPMPANFAEL 398
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: FAL1_YEAS7 (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae (strain YJM789) GN=FAL1 PE=3 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 1.623e-66 Identity = 120/185 (64.86%), Postives = 152/185 (82.16%), Query Frame = -2 Query: 199 LEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 753 LE+TRKFMN PV+ILVKRDE++LEGIKQ+ VNV+KEEWK +TLCD+Y++L ITQ VIF NT++KVDWL+ ++ + V + HGDM Q RD +M +FR+G SRVLI+TD+ ARGIDVQQVSLVINYDLP ENY+HRIGRSGRFGRKGVAINF+T+ D L +I+KFY++ I +P+N A+L Sbjct: 214 LEVTRKFMNDPVKILVKRDEISLEGIKQYVVNVDKEEWKFDTLCDIYDSLTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKADLAKLREIEKFYSIKINPMPANFAEL 398
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: IF4A_KLULA (ATP-dependent RNA helicase eIF4A OS=Kluyveromyces lactis GN=TIF1 PE=3 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 3.616e-66 Identity = 120/185 (64.86%), Postives = 156/185 (84.32%), Query Frame = -2 Query: 199 LEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 753 LE+T KFM PVRILVK+DELTLEGI Q+YVNVE+E++K + L DLY+++++TQ+VIF NTRRKV+ LT+++R + TVSA + D+ Q RD IM+EFRSGSSR+LI+TDLLARGIDVQQVSLVINYDLP+ ENY+HRIGR GRFGRKG+AINFVT D + ++++FY+ IEELPS++++L Sbjct: 210 LEVTSKFMKDPVRILVKKDELTLEGIGQYYVNVEEEQYKYDCLTDLYDSISVTQAVIFCNTRRKVEELTERLRENNFTVSAIYSDLQQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPSNKENYIHRIGRGGRFGRKGIAINFVTNKDIGAMRELERFYSTQIEELPSSISEL 394
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: IF4A_CANGA (ATP-dependent RNA helicase eIF4A OS=Candida glabrata GN=TIF1 PE=3 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 3.616e-66 Identity = 121/185 (65.41%), Postives = 155/185 (83.78%), Query Frame = -2 Query: 199 LEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 753 LE+T KFM PVRILVK+DELTLEGIKQFYVNVE+E++K + L DLY+++++TQ+VIF NTRRKV+ LT ++ + + TVS+ + D+ Q RD IM+EFRSGSSR+LI+TDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAINF+ +D + L ++++FY+ IEELPS++ L Sbjct: 210 LEVTAKFMQNPVRILVKKDELTLEGIKQFYVNVEEEQFKYDCLTDLYDSISVTQAVIFCNTRRKVEELTQRLTADNFTVSSIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPTNKENYIHRIGRGGRFGRKGVAINFIVNEDVQALRELEQFYSTQIEELPSDIGTL 394
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: FAL1_ASHGO (ATP-dependent RNA helicase FAL1 OS=Ashbya gossypii GN=FAL1 PE=3 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 3.616e-66 Identity = 118/185 (63.78%), Postives = 155/185 (83.78%), Query Frame = -2 Query: 199 LEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 753 LE+T+KFM+ PV+ILVKRDE++LEGIKQ+++NV+KEEWK +TLCDLY++L ITQ VIF NT++KVDWL+ K+ + V++ HGDM Q+ RD +M +FRSGSSRVLI+TD+ ARGIDVQQVSLVINYDLP ENY+HRIGRSGRFGRKGVAINF+TR++ L I+K Y++ I+ +P+++ L Sbjct: 213 LEVTKKFMSDPVKILVKRDEVSLEGIKQYHINVDKEEWKFDTLCDLYDSLTITQCVIFCNTKKKVDWLSHKLIQNNFAVASIHGDMKQDDRDKVMSDFRSGSSRVLISTDVWARGIDVQQVSLVINYDLPELLENYIHRIGRSGRFGRKGVAINFITREEVTKLKSIEKHYSIKIKPMPADIDSL 397
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: IF413_TOBAC (Eukaryotic initiation factor 4A-13 (Fragment) OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 4.723e-66 Identity = 125/129 (96.90%), Postives = 129/129 (100.00%), Query Frame = -2 Query: 370 ALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYD 756 ALEITRKFMN+PVRILVKRD++TLEGIKQFYVNV+KEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYD Sbjct: 227 ALEITRKFMNQPVRILVKRDDVTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYD 355
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: FAL1_CANAL (ATP-dependent RNA helicase FAL1 OS=Candida albicans GN=FAL1 PE=3 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 1.052e-65 Identity = 117/186 (62.90%), Postives = 150/186 (80.65%), Query Frame = -2 Query: 196 LEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 753 LE+T KF PV+ILVKRDE++L GIKQ+YV E+E+WK +TLCDLY+ L ITQ+VIF NT+ KV+WL D+M+ ++ TV A HGDM Q+ RD IM +FR G+SRVLI+TD+ ARGIDVQQVSLVINYDLPT ENY+HRIGRSGRFGRKG AIN +T+DD L + +K+Y+ I+E+P N+ D++ Sbjct: 214 LEMTSKFTTDPVKILVKRDEISLSGIKQYYVQCEREDWKFDTLCDLYDNLTITQAVIFCNTKLKVNWLADQMKKQNFTVVAMHGDMKQDERDSIMNDFRRGNSRVLISTDVWARGIDVQQVSLVINYDLPTDKENYIHRIGRSGRFGRKGTAINLITKDDVVTLKEFEKYYSTKIKEMPMNINDIM 399
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: FAL1_LODEL (ATP-dependent RNA helicase FAL1 OS=Lodderomyces elongisporus GN=FAL1 PE=3 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 3.061e-65 Identity = 118/186 (63.44%), Postives = 150/186 (80.65%), Query Frame = -2 Query: 196 LEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 753 LE+T KF PV+ILVKR+E++L GIKQ+Y+ EKE+WK +TLCDLY+ L ITQ+VIF NT+ KV+WLTD+MR ++ TV A HGDM Q RD IM +FRSG+SRVLI+TD+ ARGIDVQQ+SLVINYDLP ENY+HRIGRSGRFGRKG AIN +T+ D L ++K+Y+ I+E+PSNV D++ Sbjct: 214 LEMTGKFTTDPVKILVKREEVSLSGIKQYYIQCEKEDWKFDTLCDLYDNLTITQAVIFCNTKIKVNWLTDQMRKQNFTVVAMHGDMKQEERDAIMNDFRSGNSRVLISTDVWARGIDVQQISLVINYDLPLDKENYIHRIGRSGRFGRKGTAINLLTKSDTIELKALEKYYSTKIKEMPSNVNDVM 399
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: FAL1_KLULA (ATP-dependent RNA helicase FAL1 OS=Kluyveromyces lactis GN=FAL1 PE=3 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 5.222e-65 Identity = 116/185 (62.70%), Postives = 152/185 (82.16%), Query Frame = -2 Query: 199 LEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 753 LEIT+KFM+ PV+ILVKRDE++L+ IKQ+YV+VEKEEWK +TLCDLY++L ITQ VIF NTR+KVDWL+ K+ + +VS+ HGDM Q RD +M +FRSG +RVLI+TD+ ARGIDVQQ+SLVINYD+P ENY+HRIGRSGRFGRKGVAINF+T+++ L +I+ Y + I+ P+N+ +L Sbjct: 213 LEITKKFMSDPVKILVKRDEISLDVIKQYYVDVEKEEWKFDTLCDLYDSLTITQCVIFCNTRKKVDWLSRKLTQTNFSVSSMHGDMKQEERDQVMNDFRSGKARVLISTDVWARGIDVQQISLVINYDIPDNLENYIHRIGRSGRFGRKGVAINFITKEERPKLKEIESHYRIKIKPTPANLEEL 397 The following BLAST results are available for this feature:
BLAST of CV712162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712162 ID=CV712162; Name=CV712162; organism=Citrus sinensis; type=EST; length=757bpback to top |