CV712162
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: I4A3B_XENLA (Eukaryotic initiation factor 4A-III-B OS=Xenopus laevis GN=eif4a3-B PE=2 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 4.411e-72 Identity = 130/186 (69.89%), Postives = 158/186 (84.95%), Query Frame = -2 Query: 196 LEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 753 LE+T KFM P+RILVKRDELTLEGIKQF+V VE+EEWK +TLCDLY+TL ITQ+VIF NT+RKVDWLT+KMR + TVS+ HGDM Q R+ IM+EFRSG+SRVLI+TD+ ARG+DV QVSL+INYDLP E Y+HRIGRSGR+GRKGVAINFV DD R+L DI+++Y+ I+E+P NVADL+ Sbjct: 229 LEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 414
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: FAL1_AJECN (ATP-dependent RNA helicase FAL1 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=FAL1 PE=3 SV=1) HSP 1 Score: 268.855 bits (686), Expect = 2.189e-71 Identity = 129/181 (71.27%), Postives = 155/181 (85.64%), Query Frame = -2 Query: 211 LEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSN 753 L++T KFM PVRILVKRDELTLEG+KQ+++ VEKEEWK +TLCDLY+TL ITQ+VIF NTRRKVDWLTDKMR + TVS+ HG+M Q RD IM++FR G+SRVLI+TD+ ARGIDVQQVSLVINYDLP+ ENY+HRIGRSGRFGRKGVAINFVT +D R+L DI+ +Y+ I+E+P N Sbjct: 213 LDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDVRILRDIELYYSTQIDEMPMN 393
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: I4A3A_XENLA (Eukaryotic initiation factor 4A-III-A OS=Xenopus laevis GN=eif4a3-A PE=2 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 2.859e-71 Identity = 129/186 (69.35%), Postives = 157/186 (84.41%), Query Frame = -2 Query: 196 LEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 753 LE+T KFM P+RILVKRDELTLEGIKQF+V VE+EEWK +TLCDLY+TL ITQ+VIF NT+RKVDWLT+KMR + TVS+ HGDM Q R+ IM+EFRSG+SRVLI+TD+ ARG+DV QVSL+INYDLP E Y+HRIGRSGR+G KGVAINFV DD R+L DI+++Y+ I+E+P NVADL+ Sbjct: 230 LEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGGKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 415
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: FAL1_USTMA (ATP-dependent RNA helicase FAL1 OS=Ustilago maydis GN=FAL1 PE=3 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 3.734e-71 Identity = 131/186 (70.43%), Postives = 153/186 (82.26%), Query Frame = -2 Query: 196 LEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 753 LE+T KFM PVRILVKRDELTLEGIKQF+V VEKEEWK +TLCDLY+TL ITQ+VIF NTRRKVDWL+ KM+ + VS+ HG+M Q RD +M EFR GSSRVLITTD+ ARGID+ +SLVINYDLPT ENY+HRIGRSGRFGRKGVAINFVT DD R L DI++FY+ I+E+P + D+L Sbjct: 212 LEMTSKFMTDPVRILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLSAKMKENNFQVSSMHGEMQQKERDEVMAEFRQGSSRVLITTDVWARGIDIANISLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTVDDVRTLRDIEQFYSTQIDEMPVKLEDML 397
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: IF4A_CRYPV (Eukaryotic initiation factor 4A OS=Cryptosporidium parvum GN=EIF4-A PE=2 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 1.419e-70 Identity = 129/186 (69.35%), Postives = 154/186 (82.80%), Query Frame = -2 Query: 196 LEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 753 L +T +FM P RILVK++ELTLEGI+QFYV VEK+EWK++TL DLYETL I Q++I+ NTRR+VD LT +MR RD T S+ HGDMDQ R++IMR+FRSGSSRVLITTDLLARGIDVQQVSLVINYDLP PE Y+HRIGRSGRFG+KGV+INFVT DD L DI++ YN IEE+P + D+L Sbjct: 219 LHLTTQFMRDPKRILVKQEELTLEGIRQFYVGVEKDEWKMDTLIDLYETLTIVQAIIYCNTRRRVDQLTKQMRERDFTCSSMHGDMDQKDREVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPVSPETYIHRIGRSGRFGKKGVSINFVTDDDIVCLRDIERHYNTQIEEMPMGITDIL 404
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: IF4A_PICGU (ATP-dependent RNA helicase eIF4A OS=Pichia guilliermondii GN=TIF1 PE=3 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 1.853e-70 Identity = 126/185 (68.11%), Postives = 158/185 (85.41%), Query Frame = -2 Query: 199 LEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 753 LE+T KFMN PVRILVK+DELTLEGIKQFY+NVE+E++K + LCDLY+++++TQ+VIF NTR KV++LT K+++ + TVSA H D+ Q+ RD IM EFRSGSSR+LI TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT +D M+ +I+KFY+ IEE+P+N+ +L Sbjct: 210 LEVTTKFMNNPVRILVKKDELTLEGIKQFYINVEQEDFKFDCLCDLYDSISVTQAVIFCNTRSKVEFLTTKLKAENFTVSAIHADLPQSDRDTIMNEFRSGSSRILIATDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDEDVGMMREIEKFYSTQIEEMPANIGEL 394
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: FAL1_YARLI (ATP-dependent RNA helicase FAL1 OS=Yarrowia lipolytica GN=FAL1 PE=3 SV=1) HSP 1 Score: 264.618 bits (675), Expect = 4.128e-70 Identity = 127/186 (68.28%), Postives = 153/186 (82.26%), Query Frame = -2 Query: 196 LEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 753 LE+T KFM PVRILVKRDELTLEG+KQ+++ VE+EEWK +TLCDLY+TL ITQ+VIF NT++KVDWLT +M+ + TV + HGDM Q RD IM EFRSG SRVLI+TD+ ARGIDVQQVSLVINYDLP ENY+HRIGRSGRFGRKGVAINF T DD L DI+++Y+ I+E+P NV D++ Sbjct: 212 LEMTSKFMTDPVRILVKRDELTLEGLKQYFIAVEQEEWKFDTLCDLYDTLTITQAVIFCNTKKKVDWLTQQMKDNNFTVCSMHGDMAQKDRDSIMNEFRSGRSRVLISTDVWARGIDVQQVSLVINYDLPPNRENYIHRIGRSGRFGRKGVAINFATNDDITTLRDIEQYYSTQIDEMPVNVTDMM 397
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: IF4A_YARLI (ATP-dependent RNA helicase eIF4A OS=Yarrowia lipolytica GN=TIF1 PE=3 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 9.197e-70 Identity = 125/186 (67.20%), Postives = 158/186 (84.95%), Query Frame = -2 Query: 196 LEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL 753 L+IT KFM PVRILVK+DELTLEGIKQFY++VE+E +K E LCDLYET+ ++Q+VIF NTRRKVD+LT + D TVS+ HG+ +Q+ RD+IM+ FR+GSSR+LITTDLLARGIDVQQVSLVIN+DLP+ ENY+HRIGR GRFGRKGVAINFVT +D ML ++++FY+ I E+P+N+ADL+ Sbjct: 210 LDITGKFMRDPVRILVKKDELTLEGIKQFYIDVEQESYKFEVLCDLYETINVSQAVIFCNTRRKVDYLTQALTEADFTVSSMHGETEQSQRDVIMKAFRTGSSRILITTDLLARGIDVQQVSLVINFDLPSNRENYIHRIGRGGRFGRKGVAINFVTSEDHGMLKELERFYSTEIVEMPTNIADLI 395
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: IF4A_AJECN (ATP-dependent RNA helicase eIF4A OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=TIF1 PE=3 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 1.569e-69 Identity = 129/160 (80.62%), Postives = 141/160 (88.12%), Query Frame = -2 Query: 274 LEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDD 753 LE+T KFM PVRILVK+ ELTLEGIKQFY+ VEKEEWKL+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+ +RD TVSA HGDM+Q RD+IM+EFRSGSSRVLI TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT DD Sbjct: 213 LEVTTKFMRDPVRILVKKAELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQQQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADD 372
BLAST of CV712162 vs. ExPASy Swiss-Prot
Match: IF4A_CANAL (ATP-dependent RNA helicase eIF4A OS=Candida albicans GN=TIF1 PE=3 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 4.564e-69 Identity = 126/185 (68.11%), Postives = 156/185 (84.32%), Query Frame = -2 Query: 199 LEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADL 753 LE+T KFMN PVRILVK+DELTLEGIKQFY+NVE E++K + LCDLY+++++TQ+VIF NTR KV++LT+K+R + TVSA H D+ Q RD IM+EFRSGSSR+LI+TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT D M+ +I+KFY+ IEE+P+++ L Sbjct: 211 LEVTTKFMNNPVRILVKKDELTLEGIKQFYINVELEDYKFDCLCDLYDSISVTQAVIFCNTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDRDVGMMREIEKFYSTQIEEMPADIGAL 395 The following BLAST results are available for this feature:
BLAST of CV712162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712162 ID=CV712162; Name=CV712162; organism=Citrus sinensis; type=EST; length=757bpback to top |