CN192504

Overview
NameCN192504
Unique NameCN192504
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length546
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN192504 vs. ExPASy Swiss-Prot
Match: 6PGL2_ORYSI (Probable 6-phosphogluconolactonase 2 OS=Oryza sativa subsp. indica GN=OsI_025867 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.941e-26
Identity = 50/109 (45.87%), Postives = 77/109 (70.64%), Query Frame = 1 
Query:  220 VQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDXRVVPKDHDDSNYKLAYDGFLSKVPITTGHVYAINDALSAE 546
            +++F+S ++++  LA+Y + +S    KE+G F + LSGG L+  L KL E PY  +++W+KW++FW D R V K+H +SNY++  +GFLSKVPI  GHVY+IND  + E
Sbjct:   17 IRIFESSDEMSTDLAEYISQVSEISVKERGYFAIALSGGPLVSFLGKLCEAPYNKTLDWSKWYIFWSDERAVAKNHAESNYRITKEGFLSKVPILNGHVYSINDNATVE 125
[Close]
BLAST of CN192504 vs. ExPASy Swiss-Prot
Match: 6PGL1_ORYSJ (Probable 6-phosphogluconolactonase 1 OS=Oryza sativa subsp. japonica GN=Os03g0416500 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.324e-26
Identity = 52/109 (47.71%), Postives = 76/109 (69.72%), Query Frame = 1 
Query:  220 VQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDXRVVPKDHDDSNYKLAYDGFLSKVPITTGHVYAINDALSAE 546
            +++F+S +++A  LA+Y + +S    KE+G F + LSGG LI  +RKL E PY  +++W+KW++FW D R V K+H DS YK   + FLSKVPI  GHVY+IND ++ E
Sbjct:   34 IRMFESSDEMATDLAEYISQVSEISIKERGYFAIALSGGPLISFMRKLCEAPYNKTLDWSKWYIFWADERAVAKNHVDSYYKSTKEDFLSKVPILNGHVYSINDNVTVE 142
[Close]
BLAST of CN192504 vs. ExPASy Swiss-Prot
Match: 6PGL1_ORYSI (Probable 6-phosphogluconolactonase 1 OS=Oryza sativa subsp. indica GN=OsI_011697 PE=3 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 4.324e-26
Identity = 52/109 (47.71%), Postives = 76/109 (69.72%), Query Frame = 1 
Query:  220 VQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDXRVVPKDHDDSNYKLAYDGFLSKVPITTGHVYAINDALSAE 546
            +++F+S +++A  LA+Y + +S    KE+G F + LSGG LI  +RKL E PY  +++W+KW++FW D R V K+H DS YK   + FLSKVPI  GHVY+IND ++ E
Sbjct:   34 IRMFESSDEMATDLAEYISQVSEISIKERGYFAIALSGGPLISFMRKLCEAPYNKTLDWSKWYIFWADERAVAKNHVDSYYKSTKEDFLSKVPILNGHVYSINDNVTVE 142
The following BLAST results are available for this feature:
BLAST of CN192504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
6PGL2_ORYSI1.941e-2645.87Probable 6-phosphogluconolactonase 2 OS=Oryza sati... [more]
6PGL1_ORYSJ4.324e-2647.71Probable 6-phosphogluconolactonase 1 OS=Oryza sati... [more]
6PGL1_ORYSI4.324e-2647.71Probable 6-phosphogluconolactonase 1 OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006P23_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006P23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192504 ID=CN192504; Name=CN192504; organism=Citrus sinensis; type=EST; length=546bp
GAGGCTTCACTCGTCTCTTTCTCCACTTGCTTTCTTCCAAAATCACTTTA
TTCCAAAACCCACTTTCAGTTTCAGTCTCAGTTACTCAGAAGACCAAACT
CATTCCTCCAATTTCGAAACATTTCCCTTAATCGGAACAAATCATCGGAC
TGCGTGAGAATCAAGGCATCATCATCATCATCATCAATGGCTGCCGAGAA
TAAGAACAAGAACAAGAACGTACAGGTTTTTGACTCAGAGGAAGATCTGG
CTGTGTCTTTGGCCAAATACACCGCCGATCTATCTGCCAAGTTCGGTAAA
GAGAAGGGCTCCTTCACTGTCGTCTTATCCGGTGGTTCTCTCATCGACTC
CCTCAGGAAATTAGTGGAACCCCCGTATGTAGATTCAATTGAATGGGCGA
AATGGCATGTGTTTTGGGTTGATGNAAGAGTTGTTCCCAAGGATCATGAT
GATAGCAATTATAAGCTTGCTTATGATGGTTTCCTTTCTAAGGTACCAAT
TACCACTGGGCATGTCTATGCCATCAATGATGCATTATCTGCTGAA
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