CN192485

Overview
NameCN192485
Unique NameCN192485
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig906 contig Csv1_Contig906:376..1086. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN192485 vs. ExPASy Swiss-Prot
Match: SOL2_YEAST (6-phosphogluconolactonase-like protein 2 OS=Saccharomyces cerevisiae GN=SOL2 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 4.561e-20
Identity = 64/193 (33.16%), Postives = 94/193 (48.70%), Query Frame = -1
Query:  142 DSIEGAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPIT---TGNVYAINDALSAEGAAEDYETCLKHLTKSNI--LATSAATGFPKFDLMLLGMGPDGHIASLFPG-HPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDA 702
            D +    W +++ DER+VP   ++SNY  A    L  +      T  VY I+++L      +D + C  +  K  I   A   +   P FDL LLG  PDGHIASLFP     L+E   WV  ++++P  P  RI+ T PVI  S  +  VV GA K+  ++T +   +      +    A    +WF+D DA
Sbjct:  109 DDVRWGDWDIYFADERLVPFSSNESNYGCAKRKILDLIDTAKYGTPKVYHIDESL-----IDDPQECADNYEKVLIRGFAGRDSVKLPMFDLFLLGCAPDGHIASLFPNFQDNLREKLAWVVPVENAPSGPSTRISLTIPVICHSHRVTFVVEGATKAPIIKTIMERPEKGLPSSIVNEGAAGRVSWFVDDDA 296          
BLAST of CN192485 vs. ExPASy Swiss-Prot
Match: 6PGL_THEMA (6-phosphogluconolactonase OS=Thermotoga maritima GN=pgl PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.016e-19
Identity = 60/177 (33.90%), Postives = 88/177 (49.72%), Query Frame = -1
Query:  148 HVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDK 678
            H F  DER VP D D SN++   +   S+  I +GNV+ ++ +L  E A E YE  ++  T              +FDL +LGMGPDGH+AS+F      K+N   VTF   S  P   R+T TF  +N+S Y+  ++ G  K + +   L +      LP      +E+  WF+ K
Sbjct:   63 HFFLSDERYVPLDSDQSNFRNINEVLFSRAKIPSGNVHYVDTSLPIEKACEKYEREIRSAT-------------DQFDLAILGMGPDGHVASIFDLETGNKDN--LVTFTDPSGDPKVPRVTLTFRALNTSLYVLFLIRGKEKINRLTEILKDTP----LPAYFVRGKEKTVWFVGK 220          
BLAST of CN192485 vs. ExPASy Swiss-Prot
Match: SOL4_YEAST (6-phosphogluconolactonase 4 OS=Saccharomyces cerevisiae GN=SOL4 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.510e-18
Identity = 67/205 (32.68%), Postives = 104/205 (50.73%), Query Frame = -1
Query:  121 IEGAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGN-------VYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFP-KFDLMLLGMGPDGHIASLFPG---HPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTAL--GNNQNSDLLPVQMASAEEEFTWFLDKDATSKL*ES 696
            I+  +W +F+ DER+VP +   SNY       L  + +  GN       VY IN++L   G            T +  +A   A+  P  FDL+LLG G DGH  SLFPG   + L++E ++ V +  +SPK P +RITFT  V+  +  +  +V GA K + +   L   N++   +L  +M     + TWFLD +A + + E+
Sbjct:   64 IKWPQWRIFFCDERLVPFEDPQSNYGQFKKTVLDPL-VHQGNQLNLGPTVYTINESLIGGGE-----------TANRKIAEEYASMLPASFDLILLGCGEDGHTCSLFPGVEFNYLVEEMDRKVLWCNNSPKAPKDRITFTLAVVAEAKSVCFLVRGAAKKAIMHDVLIVKNSELPSVLVNEMVGT--KVTWFLDDEAGALIPEN 254          
BLAST of CN192485 vs. ExPASy Swiss-Prot
Match: 6PGL_CAEEL (Putative 6-phosphogluconolactonase OS=Caenorhabditis elegans GN=Y57G11C.3 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.510e-18
Identity = 60/183 (32.79%), Postives = 90/183 (49.18%), Query Frame = -1
Query:  136 VFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEG-AAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEK--WVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATS 675
            +F VDER V  D ++SN       +L   P    +V+            A+ YE  L+       L  +A     +FD++ LG+GPDGH AS+FPG   L++  +  WV+ I DSPKPPP RIT T   +  +  +A ++CG  K+  V+     +Q       Q     ++ T FLD+DA +
Sbjct:   80 IFMVDERNVDLDSEESNQ----GEYLRLFPNELRDVFVPMQIFKDPCLTAQHYEISLRKYLLPEQLNNTA-----RFDILFLGVGPDGHTASIFPGKERLEKITELNWVSVITDSPKPPPSRITLTLQTLQHAKNVAFIICGKQKAEIVRGICDRDQKYP--AAQARPFNDKLTLFLDEDAAT 251          
BLAST of CN192485 vs. ExPASy Swiss-Prot
Match: G6PE_MOUSE (GDH/6PGL endoplasmic bifunctional protein OS=Mus musculus GN=H6pd PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14
Identity = 52/187 (27.81%), Postives = 90/187 (48.13%), Query Frame = -1
Query:  142 SIEGAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQ-MASAEEEFTWFLDKDA 699
            S   A  H++ VDER VP    DSN++      L  V +   N++ +   L     AE+ +    + ++ + L  +++     FDL+LLGMG DGH ASLFP  P   + ++ V  + +SP  P +R++ + P+IN +  +A++V G  K                 P+  +     +  W++D +A
Sbjct:  606 SFPWAHTHLWLVDERCVPLSDPDSNFQGLQAHLLQHVRVPYYNIHPMPVHLHQRLCAEEDQGAQTYASEISALVANSS-----FDLVLLGMGTDGHTASLFPQSPTGLDGDQLVV-LTESPFRPHQRMSLSLPLINRAKKVAVLVMGRTKREITTLVSRVGHEPKKWPISGVVPLSGQLVWYMDYEA 786          
BLAST of CN192485 vs. ExPASy Swiss-Prot
Match: G6PE_HUMAN (GDH/6PGL endoplasmic bifunctional protein OS=Homo sapiens GN=H6PD PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.424e-13
Identity = 53/183 (28.96%), Postives = 86/183 (46.99%), Query Frame = -1
Query:  142 AKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQ-MASAEEEFTWFLDKDA 687
            A  H++ VDER VP    +SN++      L  V I   N++ +   L     AE+ +    +  + + L  +++     FDL+LLGMG DGH ASLFP  P   + E+ V  +  SP  P  R++ + P+IN +  +A++V G  K                 P+  +     +  W++D DA
Sbjct:  612 AHTHLWLVDERCVPLSDPESNFQGLQAHLLQHVRIPYYNIHPMPVHLQQRLCAEEDQGAQIYAREISALVANSS-----FDLVLLGMGADGHTASLFPQSPTGLDGEQLVV-LTTSPSQPHRRMSLSLPLINRAKKVAVLVMGRMKREITTLVSRVGHEPKKWPISGVLPHSGQLVWYMDYDA 788          
BLAST of CN192485 vs. ExPASy Swiss-Prot
Match: 6PGL_PSEPU (6-phosphogluconolactonase OS=Pseudomonas putida GN=pgl PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.053e-13
Identity = 53/171 (30.99%), Postives = 82/171 (47.95%), Query Frame = -1
Query:  202 DSIEGAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKD----SPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDL 702
            + ++ AK  V   DER VP +H DSN  L     L+        V     A + + AA              + A  A TG P  D+++LGMG DGH ASLFP  P L+      +  +     +P  P +R++ T  ++ S+A+IA+ V G GK + ++ AL  N  +++
Sbjct:   70 EPLDWAKVTVSLADERWVPVEHADSNAGLLARHLLTGAAAKARFVGLYQQAENLDAAA--------------LKADQALTGLPPIDVLVLGMGDDGHTASLFPASPNLEAGLDLASTRRCLPLLAPSVPHQRLSMTRSLLASAAFIALSVQGPGKLATLRAALAGNDLTEM 226          
BLAST of CN192485 vs. ExPASy Swiss-Prot
Match: 6PGL_BORBU (6-phosphogluconolactonase OS=Borrelia burgdorferi GN=pgl PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.680e-12
Identity = 50/169 (29.59%), Postives = 83/169 (49.11%), Query Frame = -1
Query:  187 HVFWVDERVVPKDHDDSNYKLAYDGFLSKVP----ITTGNVYA-INDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQM 678
            H F VDER VP + ++SNY L    F SK+     I+    +A +   +    A  DY   ++  ++ NI           FD +++ +G DGHIASLFP   LL  + +   +  +SPK P +RI+ T   +  S  + ++  G  K  A++  L +N + +  P ++
Sbjct:   58 HFFLVDERCVPLNDENSNYNLLNKNFFSKMVDKNLISISKFHAFVYSEIDEATAIHDYN--IEFNSRFNI-----------FDFIIVSVGEDGHIASLFPSRKLLFSDVEGYQYEYNSPKFPSKRISLTPKSLFGSKAVVLLFMGVDKKCALENFLASNSSINECPARL 213          
BLAST of CN192485 vs. ExPASy Swiss-Prot
Match: 6PGL_TREPA (6-phosphogluconolactonase OS=Treponema pallidum GN=pgl PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.054e-11
Identity = 43/141 (30.50%), Postives = 65/141 (46.10%), Query Frame = -1
Query:  250 FWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGK 672
            FW DER VP     SN+ + +   L  + I    V+ +    + E A   Y   ++              G P FD++LLGMG DGH AS+FP H +   +      +   P    +R++FT  +IN++  I +VV G  K
Sbjct:   63 FWSDERCVPPTDAQSNFNMTHSALLEPLEINPDAVFRVRGEDAPESACAAYSQEIE-------ARLPRQRGVPCFDIILLGMGADGHTASIFP-HEIELWDHSGCCVVATHPDTGQKRVSFTGHLINNAHEIYVVVTGREK 195          
BLAST of CN192485 vs. ExPASy Swiss-Prot
Match: 6PGL_CHLMU (6-phosphogluconolactonase OS=Chlamydia muridarum GN=pgl PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.054e-11
Identity = 51/182 (28.02%), Postives = 81/182 (44.51%), Query Frame = -1
Query:  145 AKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQ-MASAEEEFTWFLDKD 687
            +K  VFW DER        SNY  A D  L  + I    ++ + D  + +G  E YE  ++      I           FD+++LG+G DGH  SLFPG   L+E ++ V F  + P+    R+T TFP++  + ++   + G  K       L +    D  P++ + +      W L  D
Sbjct:   72 SKIFVFWGDERASEDTEAGSNYLKAMD-ILKWLRIPDTQIFRM-DTANPKGD-EIYENLIREHVPDTI-----------FDMVMLGVGEDGHTLSLFPGTAALEEKDRLVVF-NEVPQLQTRRMTLTFPIVRQARHLVAYIQGTAKQDLCHKLL-HPLGRDTFPIERVGTPLNPLQWVLSSD 237          
The following BLAST results are available for this feature:
BLAST of CN192485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
SOL2_YEAST4.561e-2033.166-phosphogluconolactonase-like protein 2 OS=Saccha... [more]
6PGL_THEMA1.016e-1933.906-phosphogluconolactonase OS=Thermotoga maritima G... [more]
SOL4_YEAST9.510e-1832.686-phosphogluconolactonase 4 OS=Saccharomyces cerev... [more]
6PGL_CAEEL9.510e-1832.79Putative 6-phosphogluconolactonase OS=Caenorhabdit... [more]
G6PE_MOUSE8.331e-1427.81GDH/6PGL endoplasmic bifunctional protein OS=Mus m... [more]
G6PE_HUMAN2.424e-1328.96GDH/6PGL endoplasmic bifunctional protein OS=Homo ... [more]
6PGL_PSEPU7.053e-1330.996-phosphogluconolactonase OS=Pseudomonas putida GN... [more]
6PGL_BORBU2.680e-1229.596-phosphogluconolactonase OS=Borrelia burgdorferi ... [more]
6PGL_TREPA5.054e-1130.506-phosphogluconolactonase OS=Treponema pallidum GN... [more]
6PGL_CHLMU5.054e-1128.026-phosphogluconolactonase OS=Chlamydia muridarum G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006P14_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006P14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192485 ID=CN192485; Name=CN192485; organism=Citrus sinensis; type=EST; length=711bp
ATTAACAGTTCACTCTTTTCTCATTACTAACAAAATCCAGCAGCCCTAGT
AGTCAAACCACACAGATCAAACCAATTATCATAGCAGATAACAGGGATTC
ACGCATACAGCTAATTGTTCCGACTCTTACAGCTTTGAAGTCGCGTCTTT
GTCAAGAAACCAAGTAAATTCTTCTTCAGCCGATGCCATTTGAACTGGCA
GCAAATCAGAGTTTTGATTATTACCCAATGCAGTTTGAACTGCACTTGAT
TTTCCAGCACCACACACCACCATTGCAATATATGCAGATGAGTTGATTAC
AGGGAAGGTGAAAGTGATTCTCTCTGGAGGTGGCTTTGGCGAGTCTTTAA
TGAAAGTAACCCATTTTTCATTCTCCTTGAGAAGAGGATGCCCTGGAAAC
AGAGAAGCTATGTGTCCATCTGGACCCATACCCAGAAGCATGAGATCAAA
CTTTGGAAAACCAGTAGCAGCAGATGTAGCTAATATATTGCTCTTTGTCA
AATGCTTGAGACAAGTCTCATAATCTTCAGCTGCACCTTCAGCAGATAAT
GCATCATTGATGGCATAGACATTGCCAGTGGTAATTGGTACCTTAGAAAG
GAAACCATCATAAGCAAGCTTATAATTGCTATCATCATGATCCTTGGGAA
CAACTCTTTCATCAACCCAAAACACATGCCATTTCGCCCCTTCAATTGAA
TCTACATACGG
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