CN192476

Overview
NameCN192476
Unique NameCN192476
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length713
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 280.026 bits (715), Expect = 8.463e-75
Identity = 140/235 (59.57%), Postives = 172/235 (73.19%), Query Frame = 1
Query:    7 DSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLA 711
            +SC  DLENYCP++  TY     DGT  YGGYS+ +V D+ FV+R PE  P D+ APLLCAGITVYSP+++YG+ + G                K  KA G+KVTVIS+S +K  EAI  LGADSFLV+ D  +M+AA+GTMD IIDT+SAVH L PL+GLLK  GKL+ +G PEKPLELP F L++GRK+VGGS +GGMKETQEM+DF AKHNI ADIE+I  D +NTA+ERLA
Sbjct:  107 ESCDQDLENYCPQMSFTYNAIGSDGTKNYGGYSENIVVDQRFVLRFPENLPSDSGAPLLCAGITVYSPMKYYGMTEAGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSTKAEEAINHLGADSFLVTTDPQKMKAAIGTMDYIIDTISAVHALYPLLGLLKVNGKLIALGLPEKPLELPMFPLVLGRKMVGGSDVGGMKETQEMLDFCAKHNITADIELIKMDEINTAMERLA 341          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH5_ORYSJ (Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CAD5 PE=3 SV=2)

HSP 1 Score: 278.485 bits (711), Expect = 2.462e-74
Identity = 141/235 (60.00%), Postives = 173/235 (73.62%), Query Frame = 1
Query:    7 DSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLA 711
            DSC   LEN+CP VI TY +   DGT+TYGGYS ++V  E FVVR PE  PLD  APLLCAGITVYSP++++GL+ P                 KFAKA G+ VTVIS+SP K+ EA+ERLGAD+F+VS++ DEM AA GTMDGII+TVSA  P+ PL+GLLK  GK++LVG PEKP+E+P F+L+   K + GS IGGM +T EMID AAKH + A+IEVI ADYVNTA+ERLA
Sbjct:  100 DSCNQGLENHCPGVIFTYNSVDKDGTVTYGGYSSMVVVHERFVVRFPEAMPLDKGAPLLCAGITVYSPMKYHGLNVPSKHVGVLGLGGLGHVAVKFAKAFGMTVTVISSSPGKRQEALERLGADAFVVSKNADEMNAATGTMDGIINTVSANIPIAPLLGLLKPNGKMILVGLPEKPMEIPPFALVASNKTLAGSCIGGMADT-EMIDLAAKHGVTAEIEVIGADYVNTAMERLA 333          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: MTDH1_STYHU (Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 7.164e-74
Identity = 138/237 (58.23%), Postives = 175/237 (73.84%), Query Frame = 1
Query:    1 EGDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLA 711
            E + C  DLE+YCPK + TY + Y  GT T GGYSD +V  + FV++ P+  PLDA APLLCAGITVYSP+++YG+ +PG                KF KA G+KVTVIS+SP+K+SEAI+ LGADSFL+S D ++M+AA GTMD IIDT+SAVH L+ L+GLLK  GKLV VG P KPL+LP F L+ GRK++GGS  GG+KETQEM+DF  KHNI A+IE+I  D +NTA+ERL+
Sbjct:   98 ECECCQQDLESYCPKPVFTYNSPYK-GTRTQGGYSDFVVVHQRFVLQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISSSPNKESEAIDVLGADSFLLSSDPEKMKAATGTMDYIIDTISAVHSLVSLLGLLKLNGKLVTVGLPSKPLQLPIFPLVAGRKLIGGSNFGGLKETQEMLDFCGKHNIAANIELIKMDEINTAIERLS 333          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH3_ORYSJ (Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CAD3 PE=2 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 1.951e-71
Identity = 133/235 (56.60%), Postives = 169/235 (71.91%), Query Frame = 1
Query:    7 DSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLA 711
            +SC    EN+CP+ + TY +   DGT+TYGGYS ++V  E FVV  PE  PLD  APLLCAGITVY+P++++GL+ PG                KFA+A G+KVTVIS+SP KK EA+ERLGAD+F+VS   +EM+AA  TMDG+I+TVSA  P+ P + LLK  GK++LVG PE PLE+P FSL+ G + + GS IGGM +TQEMI+ AAKH + ADIEVI AD VNTA+ERLA
Sbjct:  110 ESCNNGFENHCPEGVFTYNSVDKDGTVTYGGYSSMVVVHERFVVMFPEAMPLDVGAPLLCAGITVYTPMKYHGLNAPGKHVGVLGLGGLGHVAVKFARAFGLKVTVISSSPGKKREALERLGADAFVVSSSAEEMEAARSTMDGVINTVSANTPMAPYLALLKPNGKMILVGLPENPLEVPPFSLVHGNRTLAGSNIGGMADTQEMIELAAKHGVTADIEVIGADDVNTAMERLA 344          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH2_ARATH (Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis thaliana GN=CAD2 PE=1 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 3.328e-71
Identity = 137/237 (57.81%), Postives = 172/237 (72.57%), Query Frame = 1
Query:    7 DSCAIDLENYCPKVIMTYANKYHDGTI-TYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKP-GMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLA 711
            +SC  DLENYCPKV+ TY ++  DGT    GGYSD++V D  FV+ IP+G P D+ APLLCAGITVYSP+++YG+ K  G                K  KA G++VTVIS S  K+ EAI+RLGADSFLV+ D  +M+ A+GTMD IIDTVSA H L+PL  LLK  GKLV +G PEKPL+LP FSL++GRK+VGGS IGGMKETQEM++F AKH I +DIE+I    +N+A++RLA
Sbjct:  101 ESCNQDLENYCPKVVFTYNSRSSDGTSRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHALLPLFSLLKVNGKLVALGLPEKPLDLPIFSLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIELIKMSDINSAMDRLA 337          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH3_ARATH (Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis thaliana GN=CAD3 PE=1 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 2.817e-70
Identity = 134/235 (57.02%), Postives = 169/235 (71.91%), Query Frame = 1
Query:    7 DSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKP-GMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            +SC  DLENYCPKV+ TY ++  DGT   GGYSD++V D  FV+ IP+G P D+ APLLCAGITVYSP+++YG+ K  G                K  KA G++VTVIS S  K+ EAI+RLGADSFLV+ D  +M+ A+GTMD IIDTVSA H L+PL  LLK  GKLV +G  EKPL+LP F L++GRK+VGGS IGGMKETQEM++F AKH I +DIE+I    +N+A++RL
Sbjct:  101 ESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLLEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIELIKMSDINSAMDRL 335          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CAD8B_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8B OS=Oryza sativa subsp. japonica GN=CAD8B PE=3 SV=2)

HSP 1 Score: 261.922 bits (668), Expect = 2.385e-69
Identity = 125/234 (53.42%), Postives = 166/234 (70.94%), Query Frame = 1
Query:    7 DSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            DSC    ENYCP +++T   K + G  T GG+SD +V +EH+V+R+P G PLD  APLLCAG+TVYSP+  +GL+ PG                KFAKA G++VTVISTSP K+ EA+E LGAD FLVSRD  +M AA GTMDGI++TVSA HP+ PL  L+K   ++V VGAP +PLELPA++++ G K + G+ +GG+++ Q M+DFA +H I A++EVI  DYVNTA+ERL
Sbjct:  177 DSCGKGYENYCPTMVITSNGKDYGGAATQGGFSDAIVVNEHYVLRVPAGLPLDGAAPLLCAGVTVYSPMVIHGLNAPGKHVGVVGLGGLGHVAVKFAKAFGMRVTVISTSPGKRREALEHLGADEFLVSRDAGQMAAAAGTMDGILNTVSAWHPVAPLFALMKPMAQMVFVGAPTRPLELPAYAIVPGGKGITGNCVGGIRDCQAMLDFAGEHGITAEVEVIKMDYVNTAMERL 410          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH6_ORYSJ (Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CAD6 PE=2 SV=2)

HSP 1 Score: 255.373 bits (651), Expect = 2.232e-67
Identity = 132/238 (55.46%), Postives = 165/238 (69.33%), Query Frame = 1
Query:    7 DSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL---DKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLA 711
            + C    ENYC KV +TY   + DG+ITYGGYS ++VA + FVVRIP+  PLDA APLLCAGITVYSP++ +G+   D  G                KF KA G+ VTVISTSP+K+ EA E L AD+F+VS DQ +MQA   ++D IIDTV+A H L P++ LLK  GKLVLVGAPEKP+ELP+F L+ G++ V GSM GGMKETQEM+D   +HNI  DIE++  D +N AL RLA
Sbjct:  105 EHCRRSEENYCDKVALTYNGIFWDGSITYGGYSGMLVAHKRFVVRIPDTLPLDAAAPLLCAGITVYSPMKQHGMLQADAAGRRLGVVGLGGLGHVAVKFGKAFGLHVTVISTSPAKEREARENLKADNFVVSTDQKQMQAMTRSLDYIIDTVAATHSLGPILELLKVNGKLVLVGAPEKPVELPSFPLIFGKRTVSGSMTGGMKETQEMMDICGEHNITCDIEIVSTDRINDALARLA 342          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CAD8C_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8C OS=Oryza sativa subsp. japonica GN=CAD8C PE=2 SV=2)

HSP 1 Score: 251.136 bits (640), Expect = 4.210e-66
Identity = 122/237 (51.48%), Postives = 163/237 (68.78%), Query Frame = 1
Query:    7 DSCAIDLENYCPKVIMTYANKYHD---GTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            + C    ENYC K++ T     HD   G  T GG+SD +V +EH+V+R+P G PLD+ APLLCAG+TVYSP+  +GL+ PG                KFAKA G++VTVISTSP K+ EA+E LGAD FLVSRD  +M AA  TMDGI++TVSA HP+ PL  L+K   ++V VG P +PLELPA++++ G K + G+ +GG+++ Q M+DFA +H I A++EVI  DYVNTA+ERL
Sbjct:  177 ECCGNGYENYCAKMVTTCNGVDHDHGGGAATQGGFSDAIVVNEHYVLRVPAGLPLDSAAPLLCAGVTVYSPMVIHGLNAPGKHVGVVGLGGLGHVAVKFAKAFGMRVTVISTSPGKRQEALEHLGADEFLVSRDAGQMAAAAATMDGILNTVSAWHPIAPLFSLMKPMAQMVFVGGPTRPLELPAYAIVPGGKGITGNCVGGIRDCQAMLDFAGEHGITAEVEVIKMDYVNTAMERL 413          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CAD8D_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8D OS=Oryza sativa subsp. japonica GN=CAD8D PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.354e-64
Identity = 123/234 (52.56%), Postives = 160/234 (68.38%), Query Frame = 1
Query:    7 DSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            DSC    ENYCP +++T     + G  T GG+SD+MV  + +VVR+P   P D  APLLCAG+TVYSP+  YGL+ PG                KF KA G+KVTVIS+SP+K+ EA+ RLGAD+FL SRD + M AA  TMDGIIDTVSA HPL+PL+ LLK +G++V+VGAP  PL+LPA++++ G K V G+ +G + E Q M+DFA +H I AD+EV+  D VN AL RL
Sbjct:  102 DSCGKGYENYCPTMVITSNGTDYGGATTQGGFSDVMVVRQDYVVRVPASLPPDGAAPLLCAGVTVYSPMVEYGLNGPGKHLGVVGLGGLGHLGVKFGKAFGMKVTVISSSPAKRGEALGRLGADAFLSSRDGEGMAAAAATMDGIIDTVSAGHPLVPLLSLLKPKGQMVVVGAPAMPLQLPAYAIIEGGKRVAGNGVGSVAECQAMLDFAGEHGIAADVEVVAMDAVNAALGRL 335          
The following BLAST results are available for this feature:
BLAST of CN192476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
CADH9_ARATH8.463e-7559.57Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]
CADH5_ORYSJ2.462e-7460.00Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza... [more]
MTDH1_STYHU7.164e-7458.23Probable mannitol dehydrogenase 1 OS=Stylosanthes ... [more]
CADH3_ORYSJ1.951e-7156.60Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza... [more]
CADH2_ARATH3.328e-7157.81Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis th... [more]
CADH3_ARATH2.817e-7057.02Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis th... [more]
CAD8B_ORYSJ2.385e-6953.42Probable cinnamyl alcohol dehydrogenase 8B OS=Oryz... [more]
CADH6_ORYSJ2.232e-6755.46Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza... [more]
CAD8C_ORYSJ4.210e-6651.48Probable cinnamyl alcohol dehydrogenase 8C OS=Oryz... [more]
CAD8D_ORYSJ1.354e-6452.56Probable cinnamyl alcohol dehydrogenase 8D OS=Oryz... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006P09_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006P09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192476 ID=CN192476; Name=CN192476; organism=Citrus sinensis; type=EST; length=713bp
GAGGGTGATAGCTGCGCCATTGATCTTGAGAACTACTGCCCCAAAGTTAT
AATGACCTATGCCAACAAGTACCATGATGGAACCATCACATACGGAGGCT
ACTCTGACATTATGGTTGCCGATGAGCACTTTGTGGTCCGTATTCCTGAA
GGCACACCACTTGACGCCACTGCCCCTCTCCTCTGTGCTGGTATCACAGT
CTACAGTCCGTTGAGATTCTATGGACTCGACAAGCCTGGTATGCATGTGG
GTGTTGTCGGCTTGGGCGGTCTAGGCCATGTCGCCGTCAAATTCGCAAAG
GCTATGGGGGTCAAGGTGACTGTGATCAGTACCTCCCCTAGCAAGAAGAG
TGAAGCCATTGAACGTCTTGGCGCTGATTCCTTTTTGGTCAGTCGTGATC
AAGATGAGATGCAGGCTGCCATGGGCACAATGGATGGTATTATCGATACA
GTATCTGCAGTTCACCCTCTAATGCCGTTGATTGGACTGTTGAAATCTCA
AGGAAAGCTTGTACTTGTTGGTGCACCAGAGAAGCCACTGGAGCTACCAG
CTTTCTCCCTGCTCATGGGGAGGAAGATAGTTGGTGGCAGCATGATTGGN
GGGATGAAGGAGACTCAAGAGATGATTGATTTTGCGGCAAAACACAACAT
CAGAGCTGATATTGAGGTCATACCGGCCGACTATGTGAACACAGCCCTGG
AGCGCCTTGCTAA
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