CN192476

Overview
NameCN192476
Unique NameCN192476
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length713
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH7_ORYSJ (Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CAD7 PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.769e-64
Identity = 130/244 (53.28%), Postives = 166/244 (68.03%), Query Frame = 1
Query:    7 DSCAIDLENYCPK-VIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGT--------PLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLA 711
            +SC    ENYC   V+ TY +   DGT TYGGYSD +V  + FVVR P           PLD+ APLLCAG+TVY+P+R +GL + G                KFA+A G++VTVISTSP K+ EA+ERLGAD F+VS +  EM+AAMGTM GII+T SA   +   + LLK +GK++LVG PEKPL++P F+L+ G KI+ GS +G + ETQEMIDFAA+H + ADIE+I AD VNTA+ERLA
Sbjct:  117 ESCRDGCENYCSGGVVFTYNSVDRDGTRTYGGYSDAVVVSQRFVVRFPSSAGGGAGAALPLDSGAPLLCAGVTVYAPMRQHGLCEAGKHVGVVGLGGLGHVAVKFARAFGMRVTVISTSPVKRQEALERLGADGFIVSTNASEMKAAMGTMHGIINTASASTSMHSYLALLKPKGKMILVGLPEKPLQIPTFALVGGGKILAGSCMGSISETQEMIDFAAEHGVAADIELIGADEVNTAMERLA 360          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH9_ORYSJ (Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CAD9 PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.554e-63
Identity = 124/239 (51.88%), Postives = 165/239 (69.04%), Query Frame = 1
Query:   10 SCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG------TPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            +C    ENYC  ++ ++     DG   +GG+S++ V ++ +VVRIP G       PLD  APLLCAG+TVY P+R  GLD+PG+               KF KA GVKVTVISTSP K++EA+ERLGAD+FL+S + ++M+AA GTMDGIIDTVSAVH L PLI LL++ G+LV VG+P KP++L  + L    K V GSMIGGM++TQEM+DFA +H + A++EVI  + VN A+ERL
Sbjct:  103 NCRDGFENYCAGLVPSFNAALPDGATVHGGFSELAVVNQRYVVRIPGGGGGASPAPLDRLAPLLCAGVTVYCPMRRLGLDRPGVHLGVAGLGGLGHLAVKFGKAFGVKVTVISTSPWKEAEAVERLGADAFLLSTNAEQMKAAAGTMDGIIDTVSAVHDLTPLITLLRTHGQLVPVGSPGKPVQLALYPLQSDGKSVAGSMIGGMRDTQEMVDFAVEHGVAAEVEVIGMEDVNGAMERL 341          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CAD8A_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8A OS=Oryza sativa subsp. japonica GN=CAD8A PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 5.690e-63
Identity = 123/234 (52.56%), Postives = 158/234 (67.52%), Query Frame = 1
Query:    7 DSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            DSC    ENYCP +++T     + G  T GG+SD+MV  + +V+R+P   P D  APLLCAG+TVYSP+  YGL+ PG                KF KA G+KVTVIS+SP+K+ EA+ERLGAD+FL SRD + M AA  TMDGIIDTVSA HPL+PL+ LLK +G++V+VGAP  PL+LPA +++ G K V GS  G + E Q M+DFA +H I AD+EV+    VN AL RL
Sbjct:  102 DSCGKGDENYCPTMVITSNGTDYGGATTQGGFSDVMVVRQDYVLRVPASLPPDGAAPLLCAGVTVYSPMVEYGLNAPGKHLGVVGLGGLGHLGVKFGKAFGMKVTVISSSPAKREEALERLGADAFLSSRDGEGMAAAAATMDGIIDTVSAGHPLVPLLSLLKPKGQMVVVGAPAAPLQLPAIAIIDGGKRVAGSGGGSVAECQAMLDFAGEHGIAADVEVVAMGDVNAALGRL 335          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH7_PICAB (Probable cinnamyl alcohol dehydrogenase 7/8 OS=Picea abies GN=CAD7 PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.713e-59
Identity = 113/233 (48.50%), Postives = 155/233 (66.52%), Query Frame = 1
Query:   10 SCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            +C   +E YC K I TY +  HDGT T GG++  MV D+ FVVRIPE  PL+  APLLCAG+TVYSP++ +G+ +PG                K AKA G+ VTVIS+S  KK EA+E LGAD++LVS+D ++MQ A  ++D I+DT+   HPL P + LLK+ GKLV++G   +PL      L++GR+ + GS IG M+ETQE +DF A+  + + IEV+  DY+NTA+ERL
Sbjct:  105 NCNGSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVYSPMKHFGMTEPGKKCGILGLGGVGHMGVKIAKAFGLHVTVISSSDKKKEEALEVLGADAYLVSKDAEKMQEAAESLDYIMDTIPVAHPLEPYLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKVSSMIEVVGLDYINTAMERL 337          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH2_PICAB (Probable cinnamyl alcohol dehydrogenase 2 OS=Picea abies GN=CAD2 PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.713e-59
Identity = 113/233 (48.50%), Postives = 155/233 (66.52%), Query Frame = 1
Query:   10 SCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            +C   +E YC K I TY +  HDGT T GG++  MV D+ FVVRIPE  PL+  APLLCAG+TVYSP++ +G+ +PG                K AKA G+ VTVIS+S  KK EA+E LGAD++LVS+D ++MQ A  ++D I+DT+   HPL P + LLK+ GKLV++G   +PL      L++GR+ + GS IG M+ETQE +DF A+  + + IEV+  DY+NTA+ERL
Sbjct:  105 NCNGSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVYSPMKHFGMTEPGKKCGILGLGGVGHMGVKIAKAFGLHVTVISSSDKKKEEALEVLGADAYLVSKDAEKMQEAAESLDYIMDTIPVAHPLEPYLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKVSSMIEVVGLDYINTAMERL 337          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH_PINTA (Probable cinnamyl alcohol dehydrogenase OS=Pinus taeda PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.450e-58
Identity = 111/233 (47.64%), Postives = 154/233 (66.09%), Query Frame = 1
Query:   10 SCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            +C   +E YC K I TY +  HDGT T GG++  MV D+ FVVRIPE  PL+  APLLCAG+TV+SP++ + + +PG                K AKA G+ VTVIS+S  KK EA+E LGAD++LVS+D ++M  A  ++D I+DT+   HPL P + LLK+ GKLV++G   +PL      L++GR+ + GS IGGM+ETQE +DF A+  + + IEV+  DY+NTA+ERL
Sbjct:  105 NCNQSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVFSPMKHFAMTEPGKKCGILGLGGVGHLGVKIAKAFGLHVTVISSSDKKKEEAMEVLGADAYLVSKDTEKMMEAAESLDYIMDTIPVAHPLEPYLALLKTNGKLVMLGVVPEPLHFVTPPLILGRRSIAGSFIGGMEETQETLDFCAEKKVSSMIEVVGLDYINTAMERL 337          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH_PINRA (Probable cinnamyl alcohol dehydrogenase OS=Pinus radiata GN=CAD PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 9.400e-58
Identity = 110/233 (47.21%), Postives = 153/233 (65.67%), Query Frame = 1
Query:   10 SCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            +C   +E YC K I TY +  HDGT T GG++  MV D+ FVVRIPE  PL+  APLLCAG+TV+SP++ + + +PG                K AKA G+ VTVIS+S  KK EA+E LGAD++LVS+D ++M  A  ++D I+DT+   HPL P + LLK+ GKLV++G   +PL      L++GR+ + GS IG M+ETQE +DF A+  + + IEV+  DY+NTA+ERL
Sbjct:  105 NCNQSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVFSPMKHFAMTEPGKKCGILGLGGVGHMGVKIAKAFGLHVTVISSSDKKKEEAMEVLGADAYLVSKDTEKMMEAAESLDYIMDTIPVAHPLEPYLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKVSSMIEVVGLDYINTAMERL 337          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH1_TOBAC (Probable cinnamyl alcohol dehydrogenase 1 OS=Nicotiana tabacum GN=CAD14 PE=1 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.024e-56
Identity = 112/232 (48.28%), Postives = 147/232 (63.36%), Query Frame = 1
Query:   13 CAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            C  D+E YC K I    + Y DG  T GG++  MV D+ FVV+IPEG   +  APLLCAGITVYSPL  +G  + G+               K AKAMG  VTVIS+S  K+ EA+E LGAD +LVS D D+MQ A  ++D IIDTV   HPL P + LLK  GKL+L+G    PL+  +  +++GRK + GS IG MKET+EM+DF  +  + + IE++  DY+NTA+ERL
Sbjct:  106 CKRDIEQYCNKKIWNCNDVYTDGKPTQGGFAKSMVVDQKFVVKIPEGMAPEQAAPLLCAGITVYSPLNHFGFKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKRQEALEHLGADDYLVSSDTDKMQEASDSLDYIIDTVPVGHPLEPYLSLLKIDGKLILMGVINTPLQFISPMVMLGRKSITGSFIGSMKETEEMLDFCKEKGVTSQIEIVKMDYINTAMERL 337          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH_POPDE (Probable cinnamyl alcohol dehydrogenase OS=Populus deltoides PE=2 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 3.949e-56
Identity = 112/232 (48.28%), Postives = 148/232 (63.79%), Query Frame = 1
Query:   13 CAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            C  ++E YC K I +Y + Y DG  T GG+++ MV  + FVVRIP+G   +  APLLCAG+TVYSPL+ +GL + G+               K AKAMG  VTVIS+S  K+ EA+E LGAD +LVS D + MQ A   +D IIDTV  VHPL P + LLK  GKL+L+G    PL+     +++GRK + GS IG MKET+EM++F  +  + + IEVI  DY+NTA ERL
Sbjct:  106 CKSEIEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVHQKFVVRIPDGMSPEQAAPLLCAGLTVYSPLKHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEAMEHLGADEYLVSSDVESMQKAADQLDYIIDTVPVVHPLEPYLSLLKLDGKLILMGVINAPLQFVTPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGVASMIEVIKMDYINTAFERL 337          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH1_ARACO (Probable cinnamyl alcohol dehydrogenase 1 OS=Aralia cordata GN=CAD1 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 3.949e-56
Identity = 115/233 (49.36%), Postives = 149/233 (63.95%), Query Frame = 1
Query:   13 CAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDK-PGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            C  D+E YC K I +Y + Y DG  T GG+S  MV D+ FVV+IP+G   +  APLLCAG+TVYSPL  +GL +  G+               K AKAMG  VTVIS+S  KK EAI+ LGAD++LVS D  +MQ A  ++D IIDTV   HPL P + LLK  GKL+L+G    PL+  +  +++GRK + GS IG MKET+EM+DF  +  I + IEV+  DY+NTA ERL
Sbjct:  106 CKADVEQYCNKKIWSYNDVYTDGKPTQGGFSGHMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLTHFGLKEISGLRGGILGLGGVGHMGVKLAKAMGHHVTVISSSDKKKEEAIDHLGADAYLVSSDATQMQEAADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFISPMVMLGRKAITGSFIGSMKETEEMLDFCNEKGITSTIEVVKMDYINTAFERL 338          
The following BLAST results are available for this feature:
BLAST of CN192476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
CADH7_ORYSJ1.769e-6453.28Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa s... [more]
CADH9_ORYSJ2.554e-6351.88Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza... [more]
CAD8A_ORYSJ5.690e-6352.56Probable cinnamyl alcohol dehydrogenase 8A OS=Oryz... [more]
CADH7_PICAB1.713e-5948.50Probable cinnamyl alcohol dehydrogenase 7/8 OS=Pic... [more]
CADH2_PICAB1.713e-5948.50Probable cinnamyl alcohol dehydrogenase 2 OS=Picea... [more]
CADH_PINTA1.450e-5847.64Probable cinnamyl alcohol dehydrogenase OS=Pinus t... [more]
CADH_PINRA9.400e-5847.21Probable cinnamyl alcohol dehydrogenase OS=Pinus r... [more]
CADH1_TOBAC3.024e-5648.28Probable cinnamyl alcohol dehydrogenase 1 OS=Nicot... [more]
CADH_POPDE3.949e-5648.28Probable cinnamyl alcohol dehydrogenase OS=Populus... [more]
CADH1_ARACO3.949e-5649.36Probable cinnamyl alcohol dehydrogenase 1 OS=Arali... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006P09_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006P09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192476 ID=CN192476; Name=CN192476; organism=Citrus sinensis; type=EST; length=713bp
GAGGGTGATAGCTGCGCCATTGATCTTGAGAACTACTGCCCCAAAGTTAT
AATGACCTATGCCAACAAGTACCATGATGGAACCATCACATACGGAGGCT
ACTCTGACATTATGGTTGCCGATGAGCACTTTGTGGTCCGTATTCCTGAA
GGCACACCACTTGACGCCACTGCCCCTCTCCTCTGTGCTGGTATCACAGT
CTACAGTCCGTTGAGATTCTATGGACTCGACAAGCCTGGTATGCATGTGG
GTGTTGTCGGCTTGGGCGGTCTAGGCCATGTCGCCGTCAAATTCGCAAAG
GCTATGGGGGTCAAGGTGACTGTGATCAGTACCTCCCCTAGCAAGAAGAG
TGAAGCCATTGAACGTCTTGGCGCTGATTCCTTTTTGGTCAGTCGTGATC
AAGATGAGATGCAGGCTGCCATGGGCACAATGGATGGTATTATCGATACA
GTATCTGCAGTTCACCCTCTAATGCCGTTGATTGGACTGTTGAAATCTCA
AGGAAAGCTTGTACTTGTTGGTGCACCAGAGAAGCCACTGGAGCTACCAG
CTTTCTCCCTGCTCATGGGGAGGAAGATAGTTGGTGGCAGCATGATTGGN
GGGATGAAGGAGACTCAAGAGATGATTGATTTTGCGGCAAAACACAACAT
CAGAGCTGATATTGAGGTCATACCGGCCGACTATGTGAACACAGCCCTGG
AGCGCCTTGCTAA
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