CN192476

Overview
NameCN192476
Unique NameCN192476
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length713
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH1_OCIBA (Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilicum GN=CAD1 PE=1 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.703e-55
Identity = 108/232 (46.55%), Postives = 147/232 (63.36%), Query Frame = 1
Query:   13 CAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            C  D+E YC K I +Y + Y DG  T GG++  MV D+ FVV+IP+G   +  APLLCAG+TVYSPL  +GL + G+               K AKAMG  VTVIS+S  K++EA++ LGAD +LVS D   MQ A  ++D IIDTV   HPL P + LLK  GKL+L+G    PL+  +  +++GRK + GS IG MKE  EM++F  + ++ + IE++  DY+NTA ERL
Sbjct:  106 CNSDIEQYCNKKIWSYNDVYPDGKPTQGGFAGAMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLNHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRAEALDHLGADDYLVSSDAARMQEAADSLDYIIDTVPVFHPLEPYLSLLKIDGKLILMGVVNTPLQFVSPMVMLGRKSITGSFIGSMKELAEMLEFCKEKDLSSTIEIVKMDYINTAFERL 337          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH2_TOBAC (Probable cinnamyl alcohol dehydrogenase 2 OS=Nicotiana tabacum GN=CAD19 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.448e-55
Identity = 109/232 (46.98%), Postives = 147/232 (63.36%), Query Frame = 1
Query:   13 CAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            C  ++E YC K I    + Y DG  T GG+++ MV D++FVV+IPEG   +  APLLCAGITVYSP   +G ++ G                K AKAMG  VTVIS+S  K+ EA+E LGAD +LVS D D+MQ A  ++D IIDTV   HPL   + LLK  GKL+L+G    PL+  +  +++GRK + GS IG MKET+EM+DF  +  + + IE++  DY+NTA+ERL
Sbjct:  106 CKREIEQYCNKKIWNCNDVYTDGKPTQGGFANSMVVDQNFVVKIPEGMAPEQAAPLLCAGITVYSPFNHFGFNQSGFRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKRQEALEHLGADDYLVSSDTDKMQEAADSLDYIIDTVPVGHPLELYLSLLKIDGKLILIGVINTPLQFISPMVMLGRKSITGSFIGSMKETEEMLDFCKEKGVTSQIEIVKMDYINTAMERL 337          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH_EUCGL (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus globulus GN=CAD PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.270e-54
Identity = 110/232 (47.41%), Postives = 148/232 (63.79%), Query Frame = 1
Query:   13 CAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            C  D E YC K I  Y + Y DG  T GG++  +V  E FVV+IP+G   +  APL+CAG+TVYSPL  +GL + G+               K AKAMG  VTVIS+S  K++EA+E LGAD++LVS D++ M+ A  ++D I DT+  VHPL P + LLK  GKL+L G    PL+  +  +++GRK + GS IG MKET+EM++F  +  + + IEVI  DYVNTALERL
Sbjct:  106 CNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYSPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERL 337          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH2_EUCGU (Probable cinnamyl alcohol dehydrogenase 2 OS=Eucalyptus gunnii GN=CAD2 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.270e-54
Identity = 110/232 (47.41%), Postives = 148/232 (63.79%), Query Frame = 1
Query:   13 CAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            C  D E YC K I  Y + Y DG  T GG++  +V  E FVV+IP+G   +  APL+CAG+TVYSPL  +GL + G+               K AKAMG  VTVIS+S  K++EA+E LGAD++LVS D++ M+ A  ++D I DT+  VHPL P + LLK  GKL+L G    PL+  +  +++GRK + GS IG MKET+EM++F  +  + + IEVI  DYVNTALERL
Sbjct:  106 CNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYSPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERL 337          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH5_ARATH (Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis thaliana GN=CAD5 PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.697e-54
Identity = 107/232 (46.12%), Postives = 146/232 (62.93%), Query Frame = 1
Query:   13 CAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            C  DLE YCPK I +Y + Y +G  T GG++   V  + FVV+IPEG  ++  APLLCAG+TVYSPL  +GL +PG+               K AKAMG  VTVIS+S  K+ EA++ LGAD +++  DQ +M     ++D +IDTV   H L P + LLK  GKL+L+G    PL+     L++GRK++ GS IG MKET+EM++F  +  + + IEV+  DYVNTA ERL
Sbjct:  106 CERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFIGSMKETEEMLEFCKEKGLSSIIEVVKMDYVNTAFERL 337          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.076e-53
Identity = 107/233 (45.92%), Postives = 148/233 (63.52%), Query Frame = 1
Query:   10 SCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            +C  ++E YC K I +Y + Y DG IT GG+++  V ++ FVV+IPEG   +  APLLCAG+TVYSPL  +GL  PG+               K AKA+G  VTVIS+S  KK EA+E LGAD++LVS D   MQ A  ++D IIDTV   HPL P + LLK  GKL+L+G    PL+     +++GRK + GS +G +KET+EM++F  +  + + IE++  DY+N A ERL
Sbjct:  106 ACDSEIEQYCNKKIWSYNDVYTDGKITQGGFAESTVVEQKFVVKIPEGLAPEQVAPLLCAGVTVYSPLSHFGLKTPGLRGGILGLGGVGHMGVKVAKALGHHVTVISSSDKKKKEALEDLGADNYLVSSDTVGMQEAADSLDYIIDTVPVGHPLEPYLSLLKIDGKLILMGVINTPLQFVTPMVMLGRKSITGSFVGSVKETEEMLEFWKEKGLTSMIEIVTMDYINKAFERL 338          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH_LOLPR (Probable cinnamyl alcohol dehydrogenase OS=Lolium perenne PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.076e-53
Identity = 108/232 (46.55%), Postives = 149/232 (64.22%), Query Frame = 1
Query:   13 CAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            C  ++E YC K I +Y + Y DG  T GG++  MV D+ FVV+IP G   +  APLLCAG+TVYSPL+ +GL  PG+               K AK+MG  VTVIS+S  K++EA++ LGAD +LVS D+ +M AAM ++D IIDTV   HPL P + LLK  GKLVL+G   +PL   +  +++GRK + GS IG ++ET+E++ F     + + IEV+  DY+N ALERL
Sbjct:  107 CKANVEQYCNKKIWSYNDVYTDGKPTQGGFAGSMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLMTPGLRGGILGLGGVGHMGVKVAKSMGHHVTVISSSDKKRAEAMDDLGADDYLVSSDEAQMAAAMDSLDYIIDTVPVKHPLEPYLALLKMDGKLVLMGVIGEPLSFVSPMVMLGRKTITGSFIGSIEETEEVLRFCVDKGLTSQIEVVKMDYLNQALERL 338          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH4_ARATH (Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis thaliana GN=CAD4 PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 9.105e-53
Identity = 106/232 (45.69%), Postives = 144/232 (62.07%), Query Frame = 1
Query:   13 CAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            C+ +LE YC K I +Y + Y DG  T GG++D M+ ++ FVV+IPEG  ++  APLLCAG+TVYSPL  +GL   G+               K AKAMG  VTVIS+S  KK EAIE LGAD ++VS D  EMQ    ++D IIDTV   HPL P +  LK  GKL+L+G    PL+     +++GRK++ GS IG +KET+E++ F  +  + + IE +  D +N A ERL
Sbjct:  107 CSSELEQYCNKRIWSYNDVYTDGKPTQGGFADTMIVNQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLMASGLKGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKKEEAIEHLGADDYVVSSDPAEMQRLADSLDYIIDTVPVFHPLDPYLACLKLDGKLILMGVINTPLQFVTPLVILGRKVISGSFIGSIKETEEVLAFCKEKGLTSTIETVKIDELNIAFERL 338          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH2_ORYSJ (Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=CAD2 PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 9.105e-53
Identity = 108/232 (46.55%), Postives = 146/232 (62.93%), Query Frame = 1
Query:   13 CAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            C  ++E YC K I +Y + Y DG  T GG++  MV D+ FVV+IP G   +  APLLCAG+TVYSPL+ +GL  PG+               K AK+MG  VTVIS+S  K+ EA++ LGAD++LVS D   M AA  ++D IIDTV   HPL P + LLK  GKL+L+G   +PL   +  +++GRK + GS IG M ET+E+++F     + + IEV+  DYVN ALERL
Sbjct:  106 CKANVEQYCNKRIWSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQAAPLLCAGLTVYSPLKHFGLMSPGLRGGVLGLGGVGHMGVKVAKSMGHHVTVISSSARKRGEAMDDLGADAYLVSSDAAAMAAAGDSLDYIIDTVPVHHPLEPYLALLKLDGKLILMGVINQPLSFISPMVMLGRKAITGSFIGSMAETEEVLNFCVDKGLTSQIEVVKMDYVNQALERL 337          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH_MAIZE (Probable cinnamyl alcohol dehydrogenase OS=Zea mays GN=CAD PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.189e-52
Identity = 109/236 (46.19%), Postives = 145/236 (61.44%), Query Frame = 1
Query:    1 EGDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            E   C  ++E YC K I +Y + Y DG  T GG++  MV D+ FVV+IP G   +  APLLCAG+TVYSPL+ +GL  PG+               K AKAMG  VTVIS+S  K++EA++ LGAD++LVS D   M AA  ++D IIDTV   HPL P + LLK  GKLVL+G   +PL   +  +++GRK + GS IG + ET E++ F     + + IEV+   YVN ALERL
Sbjct:  102 ECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLTNPGLRGGILGLGGVGHMGVKVAKAMGHHVTVISSSSKKRAEAMDHLGADAYLVSSDAAAMAAAADSLDYIIDTVPVHHPLEPYLALLKLDGKLVLLGVIGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERL 337          
The following BLAST results are available for this feature:
BLAST of CN192476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
CADH1_OCIBA5.703e-5546.55Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilic... [more]
CADH2_TOBAC7.448e-5546.98Probable cinnamyl alcohol dehydrogenase 2 OS=Nicot... [more]
CADH_EUCGL1.270e-5447.41Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH2_EUCGU1.270e-5447.41Probable cinnamyl alcohol dehydrogenase 2 OS=Eucal... [more]
CADH5_ARATH3.697e-5446.12Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis th... [more]
CADH_MEDSA1.076e-5345.92Probable cinnamyl alcohol dehydrogenase OS=Medicag... [more]
CADH_LOLPR1.076e-5346.55Probable cinnamyl alcohol dehydrogenase OS=Lolium ... [more]
CADH4_ARATH9.105e-5345.69Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis th... [more]
CADH2_ORYSJ9.105e-5346.55Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa s... [more]
CADH_MAIZE1.189e-5246.19Probable cinnamyl alcohol dehydrogenase OS=Zea may... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006P09_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006P09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192476 ID=CN192476; Name=CN192476; organism=Citrus sinensis; type=EST; length=713bp
GAGGGTGATAGCTGCGCCATTGATCTTGAGAACTACTGCCCCAAAGTTAT
AATGACCTATGCCAACAAGTACCATGATGGAACCATCACATACGGAGGCT
ACTCTGACATTATGGTTGCCGATGAGCACTTTGTGGTCCGTATTCCTGAA
GGCACACCACTTGACGCCACTGCCCCTCTCCTCTGTGCTGGTATCACAGT
CTACAGTCCGTTGAGATTCTATGGACTCGACAAGCCTGGTATGCATGTGG
GTGTTGTCGGCTTGGGCGGTCTAGGCCATGTCGCCGTCAAATTCGCAAAG
GCTATGGGGGTCAAGGTGACTGTGATCAGTACCTCCCCTAGCAAGAAGAG
TGAAGCCATTGAACGTCTTGGCGCTGATTCCTTTTTGGTCAGTCGTGATC
AAGATGAGATGCAGGCTGCCATGGGCACAATGGATGGTATTATCGATACA
GTATCTGCAGTTCACCCTCTAATGCCGTTGATTGGACTGTTGAAATCTCA
AGGAAAGCTTGTACTTGTTGGTGCACCAGAGAAGCCACTGGAGCTACCAG
CTTTCTCCCTGCTCATGGGGAGGAAGATAGTTGGTGGCAGCATGATTGGN
GGGATGAAGGAGACTCAAGAGATGATTGATTTTGCGGCAAAACACAACAT
CAGAGCTGATATTGAGGTCATACCGGCCGACTATGTGAACACAGCCCTGG
AGCGCCTTGCTAA
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