CN192476

Overview
NameCN192476
Unique NameCN192476
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length713
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH_EUCBO (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus botryoides GN=CAD1 PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.315e-51
Identity = 107/232 (46.12%), Postives = 147/232 (63.36%), Query Frame = 1
Query:   13 CAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            C  D E YC K I  Y + Y DG  T GG++  +V  + FVV+IP+G   +  A ++CAG+TVYSPL  +GL + G+               K AKAMG  VTVIS+S  K++EA+E LGAD++LVS D++ M+ A  ++D I DT+  VHPL P + LLK  GKL+L G    PL+  +  +++GRK + GS IG MKET+EM++F  +  + + IEVI  DYVNTALERL
Sbjct:  106 CNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGQRFVVKIPDGLESEQDA-VMCAGVTVYSPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERL 336          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH_SACOF (Probable cinnamyl alcohol dehydrogenase OS=Saccharum officinarum GN=CAD PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 8.522e-51
Identity = 105/232 (45.26%), Postives = 143/232 (61.64%), Query Frame = 1
Query:   13 CAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            C  ++E YC K I +Y + Y DG  T GG++  MV D+ FV++IP G   +  APLLCAG+TVYSPL+ +GL  PG+               K AKAMG  VTVIS+S  K++EA++ LGAD++LVS D   M AA  ++D IIDTV   HPL P + LLK  GK VL+G   +PL   +  +++GRK + GS IG + ET E++ F     + + IEV+   YVN AL+RL
Sbjct:  106 CKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVMKIPAGLAPEQAAPLLCAGVTVYSPLKAFGLTTPGLRGAILGLGGVGHMGVKVAKAMGHHVTVISSSSKKRAEAMDHLGADAYLVSSDAAAMAAAADSLDYIIDTVPVHHPLEPYLALLKLDGKHVLLGVIGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALDRL 337          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH1_EUCGU (Probable cinnamyl alcohol dehydrogenase 1 OS=Eucalyptus gunnii GN=CAD1 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 8.522e-51
Identity = 106/232 (45.69%), Postives = 144/232 (62.07%), Query Frame = 1
Query:   13 CAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            C  D E YC K I  Y + Y DG  T GG++  +V  E FVV+IP+G   +  APL+CAG+TVY PL  +GL + G+               K AKAMG  VTVIS+S  K++EA+E LGAD++LVS D++ M+ A  ++D + DT+  VHPL P + LLK  GKL+L G    PL+    S ++  + + GS IG MKET+EM++F  +  + + IEVI  DYVNTALERL
Sbjct:  106 CNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYRPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYVFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQF--ISPMVMLESITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERL 335          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH1_ORYSJ (Probable cinnamyl alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=CAD1 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.454e-50
Identity = 105/234 (44.87%), Postives = 148/234 (63.25%), Query Frame = 1
Query:    7 DSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            ++C   LENYC + + T+     DGT+T GGYS  +V  E +  +IP+G PL+  APLLCAGITVYSP+  + +++PG                KF KA G+KVTVISTS SK+ EAI+ LGAD+F+VS D+++M+    +++ IIDT S  HP  P + LLK  G + L+  P +    PA +L +G + + GS+ GG K+ QEMI+F A + I  DIE+I  DY+N AL+RL
Sbjct:  104 ENCNSSLENYCSQHVFTFNGVDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLEKAAPLLCAGITVYSPMMRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLKVTVISTSESKRKEAIDLLGADNFVVSSDENQMETLKSSLNFIIDTASGDHPFDPYLTLLKVGGVMALLSFPSEIKVHPA-NLNLGGRSLSGSVTGGTKDIQEMINFCAANKIYPDIEMIKIDYINEALQRL 336          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH4_ORYSJ (Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CAD4 PE=3 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.504e-47
Identity = 98/234 (41.88%), Postives = 146/234 (62.39%), Query Frame = 1
Query:    7 DSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            ++C   LEN+C K ++TY +   DGT+T GGYS  ++  + +  +IP   PL   APLLCAGITVY+P+  + +++PG                KF KA G+KVTV STS SK+ EAI  LGAD+F++S D+++M++   ++  IIDT S  H   P + LLK  G +VL+  P + +++   +L +  + + GS+ GG K+ QEMI+F A +N+  DIE+I  DYVN AL+RL
Sbjct:  104 ENCNSSLENHCSKCVVTYNSVDSDGTVTKGGYSSHILVHQRYCFKIPADYPLSKAAPLLCAGITVYTPMIRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLKVTVFSTSESKREEAINLLGADNFVISSDENQMESLKSSLHFIIDTASGDHQFDPYLSLLKVGGVMVLLSFPSE-IKVHPENLNLAARSLAGSVTGGTKDIQEMINFCAANNVYPDIEMIKIDYVNEALQRL 336          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: ADHA_BACSU (Probable formaldehyde dehydrogenase adhA OS=Bacillus subtilis GN=adhA PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.466e-47
Identity = 106/237 (44.73%), Postives = 144/237 (60.76%), Query Frame = 1
Query:    1 EGDSCAIDLENYCPK-VIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            E + C    E +C K V+ TY +  +DG  TYGGYS  +V  + FVVRIP+   +D  +PLLCAGIT YSPL+ + +  PG                +FA AMG +VTV+S S +KK EA+E LGA+ +  + D     A  G  D I++TVSA   +   + +L+  G LV VGAP KP     FSL+MGR+ + GS++GG++ETQEM+DFAA+H I   IEVI AD V+ A ER+
Sbjct:   99 ECEYCLNAEEQFCTKGVVQTYNSVDYDGNPTYGGYSQKIVVTDRFVVRIPDRLEMDVASPLLCAGITTYSPLKHWNVG-PGKKVAIVGVGGLGHLAIQFAHAMGAEVTVLSRSMNKKEEALE-LGANHYFATSDPATFTALAGRFDVILNTVSANLDVDAYLSMLRIDGTLVSVGAPAKPDTYSVFSLIMGRRSIAGSLVGGIQETQEMLDFAAEHGIEPKIEVIGADQVDEAYERI 333          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: CADH1_ARATH (Probable cinnamyl alcohol dehydrogenase 1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.750e-47
Identity = 99/236 (41.95%), Postives = 143/236 (60.59%), Query Frame = 1
Query:    1 EGDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            E + C    E  C K + T+    HDG++T GGYS  +V  E +  +IP   PL++ APLLCAGITVY+P+  + +++PG                KF KA G+ VTV STS SKK EA+  LGA++F++S D D+M+A   ++D ++DT S  H   P + LLK  G  VLVG P + +++   +L +G +++ GS+ GG K TQ+M+DF A H I  +IEVIP   +N ALER+
Sbjct:  103 ECEYCNEGQEVNCAKGVFTFNGIDHDGSVTKGGYSSHIVVHERYCYKIPVDYPLESAAPLLCAGITVYAPMMRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLSVTVFSTSISKKEEALNLLGAENFVISSDHDQMKALEKSLDFLVDTASGDHAFDPYMSLLKIAGTYVLVGFPSE-IKISPANLNLGMRMLAGSVTGGTKITQQMLDFCAAHKIYPNIEVIPIQKINEALERV 337          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: ADHC_MYCTU (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium tuberculosis GN=adhC PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.936e-43
Identity = 101/237 (42.62%), Postives = 137/237 (57.81%), Query Frame = 1
Query:    1 EGDSCAIDLENYC-PKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            E +SC   +E YC P    TY +   DG  T GGYS+ +V DE++V+RIP+  PLD  APLLCAGIT+YSPLR +                      K   AMG  VTV+S S  K  + + RLGA S+  + D D  +   G  D I++TVSA   L   + LL   G LV +G PE P+ +PAF+L + R+ + GS IGG+ ETQEM++F A+H +  +IE+I  DY+N A ER+
Sbjct:   96 ECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHWNAGA-NTRVAIIGLGGLGHMGVKLGAAMGADVTVLSQSLKKMEDGL-RLGAKSYYATADPDTFRKLRGGFDLILNTVSANLDLGQYLNLLDVDGTLVELGIPEHPMAVPAFALALMRRSLAGSNIGGIAETQEMLNFCAEHGVTPEIELIEPDYINDAYERV 330          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: ADHC_MYCBO (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium bovis GN=adhC PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.936e-43
Identity = 101/237 (42.62%), Postives = 137/237 (57.81%), Query Frame = 1
Query:    1 EGDSCAIDLENYC-PKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            E +SC   +E YC P    TY +   DG  T GGYS+ +V DE++V+RIP+  PLD  APLLCAGIT+YSPLR +                      K   AMG  VTV+S S  K  + + RLGA S+  + D D  +   G  D I++TVSA   L   + LL   G LV +G PE P+ +PAF+L + R+ + GS IGG+ ETQEM++F A+H +  +IE+I  DY+N A ER+
Sbjct:   96 ECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHWNAGA-NTRVAIIGLGGLGHMGVKLGAAMGADVTVLSQSLKKMEDGL-RLGAKSYYATADPDTFRKLRGGFDLILNTVSANLDLGQYLNLLDVDGTLVELGIPEHPMAVPAFALALMRRSLAGSNIGGIAETQEMLNFCAEHGVTPEIELIEPDYINDAYERV 330          
BLAST of CN192476 vs. ExPASy Swiss-Prot
Match: YAHK_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yahK OS=Escherichia coli (strain K12) GN=yahK PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.231e-42
Identity = 107/237 (45.15%), Postives = 137/237 (57.81%), Query Frame = 1
Query:    7 DSCAIDLENYCPKVIMTYANKYHDGT-ITYGGYSDIMVADEHFVVRIPEGTP-LDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELP-AFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERL 708
            + C   LENYC  +  TY +   D    T GGYS  +V  E +V+RI      L A APLLCAGIT YSPLR +    PG                K A AMG  V   +TS +K+ EA + LGAD  + SR+ DEM A + + D I++TV+A H L     LLK  G + LVGAP  P + P  F+L+M R+ + GSMIGG+ ETQEM+DF A+H I ADIE+I AD +N A ER+
Sbjct:   97 EECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQAG-PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGIVADIEMIRADQINEAYERM 331          
The following BLAST results are available for this feature:
BLAST of CN192476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
CADH_EUCBO1.315e-5146.12Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH_SACOF8.522e-5145.26Probable cinnamyl alcohol dehydrogenase OS=Sacchar... [more]
CADH1_EUCGU8.522e-5145.69Probable cinnamyl alcohol dehydrogenase 1 OS=Eucal... [more]
CADH1_ORYSJ1.454e-5044.87Probable cinnamyl alcohol dehydrogenase 1 OS=Oryza... [more]
CADH4_ORYSJ1.504e-4741.88Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza... [more]
ADHA_BACSU7.466e-4744.73Probable formaldehyde dehydrogenase adhA OS=Bacill... [more]
CADH1_ARATH9.750e-4741.95Probable cinnamyl alcohol dehydrogenase 1 OS=Arabi... [more]
ADHC_MYCTU2.936e-4342.62NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHC_MYCBO2.936e-4342.62NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
YAHK_ECOLI7.231e-4245.15Uncharacterized zinc-type alcohol dehydrogenase-li... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006P09_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006P09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192476 ID=CN192476; Name=CN192476; organism=Citrus sinensis; type=EST; length=713bp
GAGGGTGATAGCTGCGCCATTGATCTTGAGAACTACTGCCCCAAAGTTAT
AATGACCTATGCCAACAAGTACCATGATGGAACCATCACATACGGAGGCT
ACTCTGACATTATGGTTGCCGATGAGCACTTTGTGGTCCGTATTCCTGAA
GGCACACCACTTGACGCCACTGCCCCTCTCCTCTGTGCTGGTATCACAGT
CTACAGTCCGTTGAGATTCTATGGACTCGACAAGCCTGGTATGCATGTGG
GTGTTGTCGGCTTGGGCGGTCTAGGCCATGTCGCCGTCAAATTCGCAAAG
GCTATGGGGGTCAAGGTGACTGTGATCAGTACCTCCCCTAGCAAGAAGAG
TGAAGCCATTGAACGTCTTGGCGCTGATTCCTTTTTGGTCAGTCGTGATC
AAGATGAGATGCAGGCTGCCATGGGCACAATGGATGGTATTATCGATACA
GTATCTGCAGTTCACCCTCTAATGCCGTTGATTGGACTGTTGAAATCTCA
AGGAAAGCTTGTACTTGTTGGTGCACCAGAGAAGCCACTGGAGCTACCAG
CTTTCTCCCTGCTCATGGGGAGGAAGATAGTTGGTGGCAGCATGATTGGN
GGGATGAAGGAGACTCAAGAGATGATTGATTTTGCGGCAAAACACAACAT
CAGAGCTGATATTGAGGTCATACCGGCCGACTATGTGAACACAGCCCTGG
AGCGCCTTGCTAA
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