CN192474

Overview
NameCN192474
Unique NameCN192474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.917e-22
Identity = 50/110 (45.45%), Postives = 74/110 (67.27%), Query Frame = 3
Query:  465 KNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPL 794
            + F++ +L  AT NFR D  LGEGGFG VFKG +++            ++A+K+L++ G QG +E++ E+  L    HPNLVKL+G+C + D RLLVYE+MP+GS+E+ L
Sbjct:   89 QTFTFQELAEATGNFRSDCFLGEGGFGKVFKGTIEK---------LDQVVAIKQLDRNGVQGIREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHL 189          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.904e-20
Identity = 47/120 (39.17%), Postives = 76/120 (63.33%), Query Frame = 3
Query:  429 RSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVEN 788
            RS    L+   +K+F+Y++L  AT NF   + +G+GG+G V+KG +          G+G ++A+KR  +   QG KE+LTEI  L +LHH NLV L+G+C ++  ++LVYE+M  G++ +
Sbjct:  599 RSSKASLKIEGVKSFTYAELALATDNFNSSTQIGQGGYGKVYKGTL----------GSGTVVAIKRAQEGSLQGEKEFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRD 708          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.241e-20
Identity = 51/127 (40.16%), Postives = 79/127 (62.20%), Query Frame = 3
Query:  414 LPQTPRSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPL 794
            LP+ P      +   ++K +++++L +AT +F   S +G GG+G V+KG +         PG G+++AVKR  Q   QG KE+ TEI  L +LHH NLV L+GYC +   ++LVYE+MP GS+++ L
Sbjct:  606 LPKPP------MNMESVKGYNFTELDSATSSFSDLSQIGRGGYGKVYKGHL---------PG-GLVVAVKRAEQGSLQGQKEFFTEIELLSRLHHRNLVSLLGYCDQKGEQMLVYEYMPNGSLQDAL 716          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.590e-19
Identity = 48/111 (43.24%), Postives = 71/111 (63.96%), Query Frame = 3
Query:  465 KNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            + FS  ++K+AT +F    ++G GGFGSV+KG +D         G   L+AVKRL     QG KE+ TE+  L +L H +LV L+GYC +D+  +LVYE+MP G++++ LF
Sbjct:  504 RRFSIFEIKSATNDFEDKLIIGVGGFGSVYKGQID---------GGATLVAVKRLEITSNQGAKEFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLF 605          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 4.689e-19
Identity = 51/124 (41.13%), Postives = 79/124 (63.71%), Query Frame = 3
Query:  432 SEGEILQSSNIK--NFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            ++ E + S ++K   F+YS+LK+AT++F P + LGEGGFG V+KG +++          G  +AVK L+    QG  +++ EI  +  + H NLVKL G C + +HRLLVYE++P GS++  LF
Sbjct:  666 TDDEEILSMDVKPYTFTYSELKSATQDFDPSNKLGEGGFGPVYKGKLND----------GREVAVKLLSVGSRQGKGQFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQALF 779          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.689e-19
Identity = 50/117 (42.74%), Postives = 72/117 (61.54%), Query Frame = 3
Query:  447 LQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            L S   + FS  ++K+AT +F    ++G GGFGSV+KG +D         G   L+AVKRL     QG KE+ TE+  L +L H +LV L+GYC  D+  +LVYE+MP G++++ LF
Sbjct:  505 LPSDLCRRFSIYEIKSATNDFEEKLIIGVGGFGSVYKGRID---------GGATLVAVKRLEITSNQGAKEFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLKDHLF 612          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.124e-19
Identity = 44/112 (39.29%), Postives = 71/112 (63.39%), Query Frame = 3
Query:  459 NIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPL 794
            ++K FS+ +++TAT NF P ++LG+GGFG V+KG++            G ++AVKRL    + G  ++ TE+  +G   H NL++L G+C+  + R+LVY +MP GSV + L
Sbjct:  284 HLKRFSFREIQTATSNFSPKNILGQGGFGMVYKGYLPN----------GTVVAVKRLKDPIYTGEVQFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRL 385          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.045e-18
Identity = 50/123 (40.65%), Postives = 76/123 (61.79%), Query Frame = 3
Query:  435 EGEILQSSNIK--NFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            E E L+  +++  +F+   +K AT NF P++ +GEGGFG V+KG + +          GM IAVK+L+ +  QG++E++TEI  +  L HPNLVKL G C++    LLVYE++   S+   LF
Sbjct:  641 ENEELRGLDLQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLAD----------GMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALF 753          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.045e-18
Identity = 50/123 (40.65%), Postives = 76/123 (61.79%), Query Frame = 3
Query:  435 EGEILQSSNIK--NFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            E E L+  +++  +F+   +K AT NF P++ +GEGGFG V+KG + +          GM IAVK+L+ +  QG++E++TEI  +  L HPNLVKL G C++    LLVYE++   S+   LF
Sbjct:  643 ENEELRGLDLQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLAD----------GMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALF 755          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.045e-18
Identity = 47/109 (43.12%), Postives = 72/109 (66.06%), Query Frame = 3
Query:  471 FSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            F+YS+LK+AT++F P + LGEGGFG V+KG +++          G ++AVK L+    QG  +++ EI  +  + H NLVKL G C + +HR+LVYE++P GS++  LF
Sbjct:  682 FTYSELKSATQDFDPSNKLGEGGFGPVYKGNLND----------GRVVAVKLLSVGSRQGKGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALF 780          
The following BLAST results are available for this feature:
BLAST of CN192474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
RLCK7_ARATH5.917e-2245.45Probable serine/threonine-protein kinase RLCKVII O... [more]
Y1684_ARATH1.904e-2039.17Probable LRR receptor-like serine/threonine-protei... [more]
Y5374_ARATH4.241e-2040.16Probable LRR receptor-like serine/threonine-protei... [more]
Y5900_ARATH3.590e-1943.24Putative receptor-like protein kinase At5g39000 OS... [more]
Y5614_ARATH4.689e-1941.13Probable LRR receptor-like serine/threonine-protei... [more]
Y5389_ARATH4.689e-1942.74Probable receptor-like protein kinase At5g38990 OS... [more]
Y5457_ARATH6.124e-1939.29Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH1.045e-1840.65Probable LRR receptor-like serine/threonine-protei... [more]
Y5343_ARATH1.045e-1840.65Probable LRR receptor-like serine/threonine-protei... [more]
Y1561_ARATH1.045e-1843.12Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006P08_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006P08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192474 ID=CN192474; Name=CN192474; organism=Citrus sinensis; type=EST; length=798bp
CCCCCGCTTTTACAAAAAGAGGGGAAAAGCAAACAAGTAATCAACAATAG
CAAAGACCTTTTTTTTTTTTTTTAACTTCTCATTTGGGTGCTTCTTAATC
CAGAATTGAACCCAAATCCCACCCTAAAAGTGAAAAAGATCACACCCAAA
ATCTATTTGTGATCATTTGTTGAGTTGGAGTTCTGGGTTCTGTTTGTTTC
ATTGAGGATAGAAAGAGAGAGTACAAAACAAAACCATAAAGGAAAAAAAT
TTCTTTAAATAAGATCTGGGTATTTTGTTTTGTCTGGATGGGAGCTTGCT
GTAGCAACAGGATTAAGGCTGAGACTCCTTCTCATACTGATGTGAATTCA
AAATATTCTAGCAGAGATGTAAAGAGTTTAAGCAGTTCCAGTGGTAAGGC
CTCTTCATTTTCCCTGCCTCAAACACCACGGAGTGAGGGTGAGATCTTGC
AGTCATCAAATATAAAGAATTTCAGCTACAGCGACCTTAAGACAGCTACC
AGAAACTTCCGCCCTGATAGTGTTTTGGGAGAAGGCGGCTTTGGTTCTGT
CTTCAAAGGATGGGTTGACGAGCATTCACTTACTTCTACAAGGCCTGGTA
CTGGCATGTTAATTGCTGTGAAGAGGCTTAACCAAGAAGGTTTCCAGGGT
CACAAGGAATGGCTAACAGAAATTAACTATCTTGGGCAGTTGCATCATCC
TAATCTTGTGAAGTTGGTTGGTTACTGTTTAAAGGATGATCACCGGCTTC
TGGTTTATGAGTTCATGCCTCGAGGTAGCGTGGAAAATCCTCTATTTA
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