CN192474

Overview
NameCN192474
Unique NameCN192474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 5.184e-18
Identity = 46/121 (38.02%), Postives = 75/121 (61.98%), Query Frame = 3
Query:  435 EGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            +G  + ++    F +  ++ AT  F P + LG+GGFG V+KG +           +G+ +AVKRL++   QG KE+  E+  + +L H NLVKL+GYCL+ + ++LVYEF+P  S+++ LF
Sbjct:  302 DGNDITTAGSLQFDFKAIEAATNCFLPINKLGQGGFGEVYKGTLS----------SGLQVAVKRLSKTSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDHFLF 412          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 8.843e-18
Identity = 49/127 (38.58%), Postives = 77/127 (60.63%), Query Frame = 3
Query:  417 PQTPRSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            P    ++G+ + ++    F +  +  AT  F P + LG+GGFG V+KG         T P +G+ +AVKRL++   QG KE+  E+  + +L H NLVKL+GYCL+ + ++LVYEF+P  S++  LF
Sbjct:  314 PPAETTDGDDITTAGSLQFDFKAIVAATDIFLPINKLGQGGFGEVYKG---------TFP-SGVQVAVKRLSKNSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDYFLF 430          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.508e-17
Identity = 49/112 (43.75%), Postives = 67/112 (59.82%), Query Frame = 3
Query:  462 IKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            I +FS   +K AT NF   + +GEGGFG V+KG + +          G +IAVK+L+    QG++E+L EI  +  LHHPNLVKL G C++    LLVYEF+   S+   LF
Sbjct:  609 IASFSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFD----------GTIIAVKQLSTGSKQGNREFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSLARALF 710          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.508e-17
Identity = 48/128 (37.50%), Postives = 78/128 (60.94%), Query Frame = 3
Query:  429 RSEGEILQSSNIKN-----FSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            R EG+ L+   IK+       +  ++ AT +F  D+ LGEGGFG+V+KG +D           G  IAVKRL+ +  QG  E++ E++ + +L H NLV+L+G+CL+ + R+L+YEF    S+++ +F
Sbjct:  313 RHEGKDLEELMIKDAQLLQLDFDTIRLATNDFSRDNQLGEGGFGAVYKGVLDY----------GEEIAVKRLSMKSGQGDNEFINEVSLVAKLQHRNLVRLLGFCLQGEERILIYEFFKNTSLDHYIF 430          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.732e-17
Identity = 45/117 (38.46%), Postives = 69/117 (58.97%), Query Frame = 3
Query:  447 LQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            + S+    F +S ++ AT  F   + LG GGFG V+KG +           TG  +A+KRL+Q   QG +E+  E++ + +L H NL KL+GYCL  + ++LVYEF+P  S++  LF
Sbjct:  327 ITSTETLQFQFSAIEAATNKFSESNKLGHGGFGEVYKGQLI----------TGETVAIKRLSQGSTQGAEEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPNKSLDYFLF 433          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.486e-17
Identity = 45/109 (41.28%), Postives = 68/109 (62.39%), Query Frame = 3
Query:  471 FSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            F+   +K AT +F P + +GEGGFG+VFKG + +          G ++AVK+L+ +  QG++E+L EI  +  L HPNLVKL G+C++    LL YE+M   S+ + LF
Sbjct:  669 FTLRQIKFATDDFNPTNKIGEGGFGAVFKGVLAD----------GRVVAVKQLSSKSRQGNREFLNEIGAISCLQHPNLVKLHGFCVERAQLLLAYEYMENNSLSSALF 767          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.486e-17
Identity = 47/107 (43.93%), Postives = 65/107 (60.75%), Query Frame = 3
Query:  477 YSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            +  LKTAT NF  ++ LG GGFGSV+KG   +          G  IAVKRL+    QG  E+  EI  L +L H NLV+L+G+C++ + RLLVYEF+   S++  +F
Sbjct:  347 FETLKTATDNFSSENELGRGGFGSVYKGVFPQ----------GQEIAVKRLSGNSGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASLDQFIF 443          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.486e-17
Identity = 44/111 (39.64%), Postives = 67/111 (60.36%), Query Frame = 3
Query:  462 IKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPL 794
            ++  +++DL  AT  F  DS++G GGFG V+K  + +          G  +A+K+L     QG +E++ E+  +G++ H NLV L+GYC   D RLLVYEFM  GS+E+ L
Sbjct:  868 LRKLTFADLLQATNGFHNDSLIGSGGFGDVYKAILKD----------GSAVAIKKLIHVSGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVL 968          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.777e-17
Identity = 49/123 (39.84%), Postives = 75/123 (60.98%), Query Frame = 3
Query:  429 RSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            + E E + + ++K F +S L+ AT +F  ++ LGEGGFG+V+KG + +          G  IAVKRL++   QG  E+  E   + +L H NLVKL+GY ++   RLLVYEF+P  S++  +F
Sbjct:  319 KHENENISTDSMK-FDFSVLQDATSHFSLENKLGEGGFGAVYKGVLSD----------GQKIAVKRLSKNAQQGETEFKNEFLLVAKLQHRNLVKLLGYSIEGTERLLVYEFLPHTSLDKFIF 430          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.277e-16
Identity = 46/122 (37.70%), Postives = 70/122 (57.38%), Query Frame = 3
Query:  429 RSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPL 794
            ++E +  Q    K F++ +L   T NF   + +G GG+G V+KG         T P  G +IA+KR  Q   QG  E+ TEI  L ++HH N+VKL+G+C     ++LVYE++P GS+ + L
Sbjct:  608 KNEMDAPQLMGTKAFTFEELSKCTNNFSDANDVGGGGYGQVYKG---------TLPN-GQVIAIKRAQQGSMQGAFEFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGL 719          
The following BLAST results are available for this feature:
BLAST of CN192474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
CRK19_ARATH5.184e-1838.02Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
CRK20_ARATH8.843e-1838.58Putative cysteine-rich receptor-like protein kinas... [more]
Y1534_ARATH1.508e-1743.75Probable LRR receptor-like serine/threonine-protei... [more]
CRK41_ARATH1.508e-1737.50Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
CRK25_ARATH5.732e-1738.46Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
RKF1_ARATH7.486e-1741.28Probable LRR receptor-like serine/threonine-protei... [more]
CRK29_ARATH7.486e-1743.93Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
BRI1_ARATH7.486e-1739.64Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
CRK26_ARATH9.777e-1739.84Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
Y5977_ARATH1.277e-1637.70Probable leucine-rich repeat receptor-like protein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006P08_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006P08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192474 ID=CN192474; Name=CN192474; organism=Citrus sinensis; type=EST; length=798bp
CCCCCGCTTTTACAAAAAGAGGGGAAAAGCAAACAAGTAATCAACAATAG
CAAAGACCTTTTTTTTTTTTTTTAACTTCTCATTTGGGTGCTTCTTAATC
CAGAATTGAACCCAAATCCCACCCTAAAAGTGAAAAAGATCACACCCAAA
ATCTATTTGTGATCATTTGTTGAGTTGGAGTTCTGGGTTCTGTTTGTTTC
ATTGAGGATAGAAAGAGAGAGTACAAAACAAAACCATAAAGGAAAAAAAT
TTCTTTAAATAAGATCTGGGTATTTTGTTTTGTCTGGATGGGAGCTTGCT
GTAGCAACAGGATTAAGGCTGAGACTCCTTCTCATACTGATGTGAATTCA
AAATATTCTAGCAGAGATGTAAAGAGTTTAAGCAGTTCCAGTGGTAAGGC
CTCTTCATTTTCCCTGCCTCAAACACCACGGAGTGAGGGTGAGATCTTGC
AGTCATCAAATATAAAGAATTTCAGCTACAGCGACCTTAAGACAGCTACC
AGAAACTTCCGCCCTGATAGTGTTTTGGGAGAAGGCGGCTTTGGTTCTGT
CTTCAAAGGATGGGTTGACGAGCATTCACTTACTTCTACAAGGCCTGGTA
CTGGCATGTTAATTGCTGTGAAGAGGCTTAACCAAGAAGGTTTCCAGGGT
CACAAGGAATGGCTAACAGAAATTAACTATCTTGGGCAGTTGCATCATCC
TAATCTTGTGAAGTTGGTTGGTTACTGTTTAAAGGATGATCACCGGCTTC
TGGTTTATGAGTTCATGCCTCGAGGTAGCGTGGAAAATCCTCTATTTA
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