CN192474

Overview
NameCN192474
Unique NameCN192474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.845e-16
Identity = 49/122 (40.16%), Postives = 74/122 (60.66%), Query Frame = 3
Query:  441 EILQSSNIKNFSYSDLK---TATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            ++  S+N ++    DL+   TAT NF  ++ LG+GGFGSV+KG +           +G  IAVKRL +   QG  E+  E+  L +L H NLVKL+G+C + D  +LVYEF+P  S+++ +F
Sbjct:  320 DVFDSNNGQSMLRFDLRMIVTATNNFSLENKLGQGGFGSVYKGILP----------SGQEIAVKRLRKGSGQGGMEFKNEVLLLTRLQHRNLVKLLGFCNEKDEEILVYEFVPNSSLDHFIF 431          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.715e-16
Identity = 49/126 (38.89%), Postives = 76/126 (60.32%), Query Frame = 3
Query:  420 QTPRSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            +T +   +I  S +++ F +  ++ AT NF   + LG GGFG V+KG         T P  G  +AVKRL++   QG +E+  E+  + +L H NLVKL+GY +K D ++LVYEF+P  S+++ LF
Sbjct:  284 KTTKIADDITTSGSLQ-FEFKAIEAATCNFHNVNKLGHGGFGEVYKG---------TFPN-GTEVAVKRLSKTSGQGEEEFKNEVFLVAKLQHRNLVKLLGYAVKGDEKILVYEFLPNKSLDHFLF 398          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.852e-16
Identity = 45/123 (36.59%), Postives = 70/123 (56.91%), Query Frame = 3
Query:  429 RSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQ-EGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPL 794
            + E  +L   N+++F++ +L  AT  F   S+LG GGFG+V++G          + G G ++AVKRL    G  G+ ++ TE+  +    H NL++L+GYC     RLLVY +M  GSV + L
Sbjct:  273 KQEEGLLGLGNLRSFTFRELHVATDGFSSKSILGAGGFGNVYRG----------KFGDGTVVAVKRLKDVNGTSGNSQFRTELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRL 385          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.852e-16
Identity = 43/121 (35.54%), Postives = 72/121 (59.50%), Query Frame = 3
Query:  435 EGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            E + + ++    F +  ++ AT  F   + LG+GGFG V+KG             +G+ +AVKRL++   QG +E+  E+  + +L H NLV+L+G+CL+ D R+LVYEF+P  S++  +F
Sbjct:  327 ESDDITTAGSLQFDFKAIEAATNKFCETNKLGQGGFGEVYKGIFP----------SGVQVAVKRLSKTSGQGEREFANEVIVVAKLQHRNLVRLLGFCLERDERILVYEFVPNKSLDYFIF 437          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 6.337e-16
Identity = 41/109 (37.61%), Postives = 67/109 (61.47%), Query Frame = 3
Query:  471 FSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            F +  ++ AT  F   +++G GGFG VF G ++           G  +A+KRL++   QG +E+  E+  + +LHH NLVKL+G+CL+ + ++LVYEF+P  S++  LF
Sbjct:  325 FDFKAIEDATNKFSESNIIGRGGFGEVFMGVLN-----------GTEVAIKRLSKASRQGAREFKNEVVVVAKLHHRNLVKLLGFCLEGEEKILVYEFVPNKSLDYFLF 422          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.337e-16
Identity = 42/111 (37.84%), Postives = 67/111 (60.36%), Query Frame = 3
Query:  462 IKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPL 794
            ++  +++DL  AT  F  DS++G GGFG V+K  + +          G ++A+K+L     QG +E+  E+  +G++ H NLV L+GYC   + RLLVYE+M  GS+E+ L
Sbjct:  873 LRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKD----------GSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVL 973          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.337e-16
Identity = 42/111 (37.84%), Postives = 67/111 (60.36%), Query Frame = 3
Query:  462 IKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPL 794
            ++  +++DL  AT  F  DS++G GGFG V+K  + +          G ++A+K+L     QG +E+  E+  +G++ H NLV L+GYC   + RLLVYE+M  GS+E+ L
Sbjct:  873 LRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKD----------GSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVL 973          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 8.276e-16
Identity = 43/113 (38.05%), Postives = 68/113 (60.18%), Query Frame = 3
Query:  459 NIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            + +   +  ++ AT NF   + LG+GGFG V+KG +            G  +AVKRL++   QG +E+  E+  + +L H NLVKL+GYCL+ + ++LVYEF+P  S++  LF
Sbjct:  351 HFQQLDFKTIEVATENFAKTNKLGQGGFGEVYKGTLVN----------GTEVAVKRLSKTSEQGAQEFKNEVVLVAKLQHRNLVKLLGYCLEPEEKILVYEFVPNKSLDYFLF 453          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.081e-15
Identity = 46/110 (41.82%), Postives = 64/110 (58.18%), Query Frame = 3
Query:  465 KNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPL 794
            + F+YS++   T NF    V+GEGGFG V  G V+              +AVK L+Q   QG+KE+  E++ L ++HH NLV LVGYC + DH  L+YEF+P G +   L
Sbjct:  568 RKFTYSEVTKMTNNF--GRVVGEGGFGVVCHGTVNGSEQ----------VAVKLLSQSSTQGYKEFKAEVDLLLRVHHTNLVSLVGYCDEGDHLALIYEFVPNGDLRQHL 665          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.412e-15
Identity = 43/109 (39.45%), Postives = 67/109 (61.47%), Query Frame = 3
Query:  468 NFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPL 794
            N ++SDL +AT NF  D++L +G FG V++G++         PG G+ +AVK L        +E   E+ +LG++ HPNLV L GYC+  D R+ +YE+M  G+++N L
Sbjct:  533 NITFSDLLSATSNFDRDTLLADGKFGPVYRGFL---------PG-GIHVAVKVLVHGSTLSDQEAARELEFLGRIKHPNLVPLTGYCIAGDQRIAIYEYMENGNLQNLL 631          
The following BLAST results are available for this feature:
BLAST of CN192474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
CRK37_ARATH2.845e-1640.16Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
CRK24_ARATH3.715e-1638.89Cysteine-rich receptor-like protein kinase 24 OS=A... [more]
Y2239_ARATH4.852e-1636.59Probable LRR receptor-like serine/threonine-protei... [more]
CRK4_ARATH4.852e-1635.54Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
CRK14_ARATH6.337e-1637.61Cysteine-rich receptor-like protein kinase 14 OS=A... [more]
BRI1_SOLPE6.337e-1637.84Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
BRI1_SOLLC6.337e-1637.84Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
CRK12_ARATH8.276e-1638.05Putative cysteine-rich receptor-like protein kinas... [more]
Y5596_ARATH1.081e-1541.82Probable LRR receptor-like serine/threonine-protei... [more]
Y2242_ARATH1.412e-1539.45Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006P08_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006P08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192474 ID=CN192474; Name=CN192474; organism=Citrus sinensis; type=EST; length=798bp
CCCCCGCTTTTACAAAAAGAGGGGAAAAGCAAACAAGTAATCAACAATAG
CAAAGACCTTTTTTTTTTTTTTTAACTTCTCATTTGGGTGCTTCTTAATC
CAGAATTGAACCCAAATCCCACCCTAAAAGTGAAAAAGATCACACCCAAA
ATCTATTTGTGATCATTTGTTGAGTTGGAGTTCTGGGTTCTGTTTGTTTC
ATTGAGGATAGAAAGAGAGAGTACAAAACAAAACCATAAAGGAAAAAAAT
TTCTTTAAATAAGATCTGGGTATTTTGTTTTGTCTGGATGGGAGCTTGCT
GTAGCAACAGGATTAAGGCTGAGACTCCTTCTCATACTGATGTGAATTCA
AAATATTCTAGCAGAGATGTAAAGAGTTTAAGCAGTTCCAGTGGTAAGGC
CTCTTCATTTTCCCTGCCTCAAACACCACGGAGTGAGGGTGAGATCTTGC
AGTCATCAAATATAAAGAATTTCAGCTACAGCGACCTTAAGACAGCTACC
AGAAACTTCCGCCCTGATAGTGTTTTGGGAGAAGGCGGCTTTGGTTCTGT
CTTCAAAGGATGGGTTGACGAGCATTCACTTACTTCTACAAGGCCTGGTA
CTGGCATGTTAATTGCTGTGAAGAGGCTTAACCAAGAAGGTTTCCAGGGT
CACAAGGAATGGCTAACAGAAATTAACTATCTTGGGCAGTTGCATCATCC
TAATCTTGTGAAGTTGGTTGGTTACTGTTTAAAGGATGATCACCGGCTTC
TGGTTTATGAGTTCATGCCTCGAGGTAGCGTGGAAAATCCTCTATTTA
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