CN192474

Overview
NameCN192474
Unique NameCN192474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.844e-15
Identity = 43/120 (35.83%), Postives = 70/120 (58.33%), Query Frame = 3
Query:  438 GEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            G+ + +++     Y  ++TAT +F   + +G GGFG V+KG              G  +AVKRL++   QG  E+ TE+  + +L H NLV+L+G+ L+ + R+LVYE+MP  S++  LF
Sbjct:  330 GDDMATADSLQLDYRTIQTATNDFAESNKIGRGGFGEVYKGTFSN----------GKEVAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLF 439          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.844e-15
Identity = 43/120 (35.83%), Postives = 70/120 (58.33%), Query Frame = 3
Query:  438 GEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            G+ + +++     Y  ++TAT +F   + +G GGFG V+KG              G  +AVKRL++   QG  E+ TE+  + +L H NLV+L+G+ L+ + R+LVYE+MP  S++  LF
Sbjct:  328 GDDMATADSLQLDYRTIQTATNDFAESNKIGRGGFGEVYKGTFSN----------GKEVAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLF 437          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.844e-15
Identity = 42/111 (37.84%), Postives = 67/111 (60.36%), Query Frame = 3
Query:  462 IKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPL 794
            ++  +++ L  AT  F  DS++G GGFG V+K  + +          G ++A+K+L Q   QG +E++ E+  +G++ H NLV L+GYC   + RLLVYE+M  GS+E  L
Sbjct:  843 LRKLTFAHLLEATNGFSADSMIGSGGFGDVYKAKLAD----------GSVVAIKKLIQVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKYGSLETVL 943          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.408e-15
Identity = 42/105 (40.00%), Postives = 64/105 (60.95%), Query Frame = 3
Query:  471 FSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVE 785
            F+  DL+ AT  F P +VLGEGG+G V++G          +   G  +AVK+L     Q  KE+  E+  +G + H NLV+L+GYC++  HR+LVYE++  G++E
Sbjct:  171 FTLRDLELATNRFAPVNVLGEGGYGVVYRG----------KLVNGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLE 265          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.408e-15
Identity = 46/122 (37.70%), Postives = 75/122 (61.48%), Query Frame = 3
Query:  432 SEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            +E +I  S +++ F +  ++ AT NF+  + LG GGFG VFKG         T P  G  +AVKRL++   QG +E+  E+  + +L H NLV+L+G+ ++ + ++LVYE+MP  S++  LF
Sbjct:  311 TENDITTSGSLQ-FDFKAIEAATNNFQKSNKLGHGGFGEVFKG---------TFPN-GTEVAVKRLSKISGQGEEEFKNEVLLVAKLQHRNLVRLLGFSVEGEEKILVYEYMPNKSLDYFLF 421          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.408e-15
Identity = 42/120 (35.00%), Postives = 72/120 (60.00%), Query Frame = 3
Query:  438 GEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            G+ + +++     Y  ++TAT +F   + +G+GGFG V+KG + +          G  +AVKRL++   QG  E+  E+  + +L H NLV+L+G+CL  + R+LVYE++P  S++  LF
Sbjct:  314 GDDITTADSLQLDYRTIQTATDDFVESNKIGQGGFGEVYKGTLSD----------GTEVAVKRLSKSSGQGEVEFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEYVPNKSLDYFLF 423          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.408e-15
Identity = 44/111 (39.64%), Postives = 64/111 (57.66%), Query Frame = 3
Query:  462 IKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPL 794
            ++   +S L  AT  F   S++G GGFG VFK  + +          G  +A+K+L +   QG +E++ E+  LG++ H NLV L+GYC   + RLLVYEFM  GS+E  L
Sbjct:  823 LRKLKFSQLIEATNGFSAASMIGHGGFGEVFKATLKD----------GSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKIGEERLLVYEFMQYGSLEEVL 923          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.145e-15
Identity = 47/124 (37.90%), Postives = 68/124 (54.84%), Query Frame = 3
Query:  426 PRSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHK-EWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPL 794
            P  E   +    +K FS  +L+ A+ NF   ++LG GGFG V+KG          R   G L+AVKRL +E  QG + ++ TE+  +    H NL++L G+C+    RLLVY +M  GSV + L
Sbjct:  262 PAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKG----------RLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL 375          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.108e-15
Identity = 48/124 (38.71%), Postives = 72/124 (58.06%), Query Frame = 3
Query:  414 LPQTPRSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVE 785
            LP   RS    + + N K F+Y+++ T T NF+   +LG+GGFG V+ G V+         GT   +AVK L+    QG+K++  E+  L ++HH NLV LVGYC + D   L+YE+M  G ++
Sbjct:  549 LPADSRSSEPTIVTKN-KKFTYAEVLTMTNNFQ--KILGKGGFGIVYYGSVN---------GTEQ-VAVKMLSHSSAQGYKQFKAEVELLLRVHHKNLVGLVGYCEEGDKLALIYEYMANGDLD 659          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.108e-15
Identity = 44/110 (40.00%), Postives = 65/110 (59.09%), Query Frame = 3
Query:  465 KNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPL 794
            + F+YS++   T NF+   V+GEGGFG V  G ++              +AVK L+Q   QG+K +  E++ L ++HH NLV LVGYC + DH  L+YEF+P+G +   L
Sbjct:  567 RRFTYSEVIKMTNNFQ--RVVGEGGFGVVCHGTINGSEQ----------VAVKVLSQSSSQGYKHFKAEVDLLLRVHHTNLVSLVGYCDERDHLALIYEFLPKGDLRQHL 664          
The following BLAST results are available for this feature:
BLAST of CN192474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
CRK8_ARATH1.844e-1535.83Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
CRK6_ARATH1.844e-1535.83Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]
BRL3_ARATH1.844e-1537.84Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
Y2296_ARATH2.408e-1540.00Probable receptor-like protein kinase At2g42960 OS... [more]
CRK16_ARATH2.408e-1537.70Putative cysteine-rich receptor-like protein kinas... [more]
CRK10_ARATH2.408e-1535.00Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
BRL2_ARATH2.408e-1539.64Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
BAK1_ARATH3.145e-1537.90BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
Y5181_ARATH4.108e-1538.71Probable LRR receptor-like serine/threonine-protei... [more]
PAM74_ARATH4.108e-1540.00Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006P08_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006P08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192474 ID=CN192474; Name=CN192474; organism=Citrus sinensis; type=EST; length=798bp
CCCCCGCTTTTACAAAAAGAGGGGAAAAGCAAACAAGTAATCAACAATAG
CAAAGACCTTTTTTTTTTTTTTTAACTTCTCATTTGGGTGCTTCTTAATC
CAGAATTGAACCCAAATCCCACCCTAAAAGTGAAAAAGATCACACCCAAA
ATCTATTTGTGATCATTTGTTGAGTTGGAGTTCTGGGTTCTGTTTGTTTC
ATTGAGGATAGAAAGAGAGAGTACAAAACAAAACCATAAAGGAAAAAAAT
TTCTTTAAATAAGATCTGGGTATTTTGTTTTGTCTGGATGGGAGCTTGCT
GTAGCAACAGGATTAAGGCTGAGACTCCTTCTCATACTGATGTGAATTCA
AAATATTCTAGCAGAGATGTAAAGAGTTTAAGCAGTTCCAGTGGTAAGGC
CTCTTCATTTTCCCTGCCTCAAACACCACGGAGTGAGGGTGAGATCTTGC
AGTCATCAAATATAAAGAATTTCAGCTACAGCGACCTTAAGACAGCTACC
AGAAACTTCCGCCCTGATAGTGTTTTGGGAGAAGGCGGCTTTGGTTCTGT
CTTCAAAGGATGGGTTGACGAGCATTCACTTACTTCTACAAGGCCTGGTA
CTGGCATGTTAATTGCTGTGAAGAGGCTTAACCAAGAAGGTTTCCAGGGT
CACAAGGAATGGCTAACAGAAATTAACTATCTTGGGCAGTTGCATCATCC
TAATCTTGTGAAGTTGGTTGGTTACTGTTTAAAGGATGATCACCGGCTTC
TGGTTTATGAGTTCATGCCTCGAGGTAGCGTGGAAAATCCTCTATTTA
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