CN192474

Overview
NameCN192474
Unique NameCN192474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.108e-15
Identity = 43/124 (34.68%), Postives = 74/124 (59.68%), Query Frame = 3
Query:  426 PRSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            P+++ ++    +++ F +  L+ AT  F  ++ LG+GGFG V+KG +   +           +AVKRL+    QG +E+  E+  + +L H NLV+L+G+CL+ D ++LVYEF+P  S+   LF
Sbjct:  295 PKTDDDMTSPQSLQ-FDFMTLEAATDKFSRNNKLGKGGFGEVYKGMLPNETE----------VAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCLERDEQILVYEFVPNKSLNYFLF 407          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.365e-15
Identity = 42/109 (38.53%), Postives = 64/109 (58.72%), Query Frame = 3
Query:  471 FSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            FS S+L+  T+NF    ++G GGFG+V+ G +D+          G  +A+KR N +  QG  E+ TEI  L +L H +LV L+GYC ++   +LVYE+M  G   + L+
Sbjct:  513 FSLSELQEVTKNFDASEIIGVGGFGNVYIGTIDD----------GTQVAIKRGNPQSEQGITEFHTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEYMSNGPFRDHLY 611          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.365e-15
Identity = 40/102 (39.22%), Postives = 67/102 (65.69%), Query Frame = 3
Query:  483 DLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVEN 788
            D+  AT +F   +++G+GGFG+V+K  +         PG    +AVK+L++   QG++E++ E+  LG++ HPNLV L+GYC   + +LLVYE+M  GS+++
Sbjct:  909 DIVEATDHFSKKNIIGDGGFGTVYKACL---------PGE-KTVAVKKLSEAKTQGNREFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSLDH 1000          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.365e-15
Identity = 44/109 (40.37%), Postives = 66/109 (60.55%), Query Frame = 3
Query:  471 FSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            F    +  AT +F  ++ LG+GGFG+V+KG         T P  G  +AVKRL +   QG  E+  E++ L +L H NLVKL+G+C + D  +LVYEF+P  S+++ +F
Sbjct:  336 FDLGMIVMATDDFSSENTLGQGGFGTVYKG---------TFPN-GQEVAVKRLTKGSGQGDMEFKNEVSLLTRLQHKNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIF 434          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.365e-15
Identity = 46/109 (42.20%), Postives = 68/109 (62.39%), Query Frame = 3
Query:  471 FSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            F +  + TAT +F  ++ +G+GGFGSV+KG +         PG G  IAVKRL +   QG  E+  E+  L +L H NLVKL+G+C + D  +LVYEF+P  S+++ +F
Sbjct:  327 FDFRMILTATDDFSFENKIGQGGFGSVYKGKL---------PG-GEEIAVKRLTRGSGQGEIEFRNEVLLLTRLQHRNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIF 425          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.006e-15
Identity = 42/109 (38.53%), Postives = 66/109 (60.55%), Query Frame = 3
Query:  471 FSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            F +++L+TAT+NF  ++V G GGFG V+ G +D           G  +A+KR +Q   QG  E+ TEI  L +L H +LV L+G+C ++   +LVYE+M  G + + L+
Sbjct:  513 FPFTELQTATQNFDENAVCGVGGFGKVYIGEIDG----------GTQVAIKRGSQSSEQGINEFQTEIQMLSKLRHRHLVSLIGFCDENKEMILVYEYMSNGPLRDHLY 611          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.006e-15
Identity = 46/121 (38.02%), Postives = 70/121 (57.85%), Query Frame = 3
Query:  420 QTPRSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSV 782
            +T RS    + + N + F+YS++ T T NF  + VLG+GGFG V+ G V+              +AVK L+    QG+KE+  E+  L ++HH NLV LVGYC + ++  L+YE+M  G +
Sbjct:  566 RTIRSSESAIMTKN-RRFTYSEVVTMTNNF--ERVLGKGGFGMVYHGTVNNTEQ----------VAVKMLSHSSSQGYKEFKAEVELLLRVHHKNLVGLVGYCDEGENLALIYEYMANGDL 673          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.006e-15
Identity = 46/122 (37.70%), Postives = 70/122 (57.38%), Query Frame = 3
Query:  441 EILQSSNIKN---FSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            EIL+   I +   F Y DL  AT  F+ + V+G GGFG V++G +   S           IAVK++     QG +E++ EI  LG+L H NLV L G+C   +  LL+Y+++P GS+++ L+
Sbjct:  338 EILEDWEIDHPHRFRYRDLYKATEGFKENRVVGTGGFGIVYRGNIRSSSDQ---------IAVKKITPNSMQGVREFVAEIESLGRLRHKNLVNLQGWCKHRNDLLLIYDYIPNGSLDSLLY 450          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.151e-15
Identity = 47/120 (39.17%), Postives = 71/120 (59.17%), Query Frame = 3
Query:  426 PRSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVE 785
            PRS    + + N + FSYS +   T NF+   +LG+GGFG V+ G+V+         GT   +AVK L+    QG+K++  E+  L ++HH NLV LVGYC + D+  L+YE+M  G ++
Sbjct:  554 PRSSEPAIVTKN-RRFSYSQVVIMTNNFQ--RILGKGGFGMVYHGFVN---------GTEQ-VAVKILSHSSSQGYKQFKAEVELLLRVHHKNLVGLVGYCDEGDNLALIYEYMANGDLK 660          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.151e-15
Identity = 42/110 (38.18%), Postives = 66/110 (60.00%), Query Frame = 3
Query:  471 FSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEI-----NYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVE 785
            F+Y+D+  AT NF  + V+G GG+G+V++G + +          G  +AVK+L +EG +  KE+  E+     N  G   HPNLV+L G+CL    ++LV+E+M  GS+E
Sbjct:  802 FTYADILKATSNFSEERVVGRGGYGTVYRGVLPD----------GREVAVKKLQREGTEAEKEFRAEMEVLSANAFGDWAHPNLVRLYGWCLDGSEKILVHEYMGGGSLE 901          
The following BLAST results are available for this feature:
BLAST of CN192474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
CRK32_ARATH4.108e-1534.68Putative cysteine-rich receptor-like protein kinas... [more]
Y2214_ARATH5.365e-1538.53Probable receptor-like protein kinase At2g21480 OS... [more]
EXS_ARATH5.365e-1539.22Leucine-rich repeat receptor protein kinase EXS OS... [more]
CRK40_ARATH5.365e-1540.37Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
CRK38_ARATH5.365e-1542.20Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
Y5613_ARATH7.006e-1538.53Probable receptor-like protein kinase At5g61350 OS... [more]
RLK6_ARATH7.006e-1538.02Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
LRKA3_ARATH7.006e-1537.70Lectin-domain containing receptor kinase A4.3 OS=A... [more]
Y5182_ARATH9.151e-1539.17Probable LRR receptor-like serine/threonine-protei... [more]
Y1743_ARATH9.151e-1538.18Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006P08_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006P08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192474 ID=CN192474; Name=CN192474; organism=Citrus sinensis; type=EST; length=798bp
CCCCCGCTTTTACAAAAAGAGGGGAAAAGCAAACAAGTAATCAACAATAG
CAAAGACCTTTTTTTTTTTTTTTAACTTCTCATTTGGGTGCTTCTTAATC
CAGAATTGAACCCAAATCCCACCCTAAAAGTGAAAAAGATCACACCCAAA
ATCTATTTGTGATCATTTGTTGAGTTGGAGTTCTGGGTTCTGTTTGTTTC
ATTGAGGATAGAAAGAGAGAGTACAAAACAAAACCATAAAGGAAAAAAAT
TTCTTTAAATAAGATCTGGGTATTTTGTTTTGTCTGGATGGGAGCTTGCT
GTAGCAACAGGATTAAGGCTGAGACTCCTTCTCATACTGATGTGAATTCA
AAATATTCTAGCAGAGATGTAAAGAGTTTAAGCAGTTCCAGTGGTAAGGC
CTCTTCATTTTCCCTGCCTCAAACACCACGGAGTGAGGGTGAGATCTTGC
AGTCATCAAATATAAAGAATTTCAGCTACAGCGACCTTAAGACAGCTACC
AGAAACTTCCGCCCTGATAGTGTTTTGGGAGAAGGCGGCTTTGGTTCTGT
CTTCAAAGGATGGGTTGACGAGCATTCACTTACTTCTACAAGGCCTGGTA
CTGGCATGTTAATTGCTGTGAAGAGGCTTAACCAAGAAGGTTTCCAGGGT
CACAAGGAATGGCTAACAGAAATTAACTATCTTGGGCAGTTGCATCATCC
TAATCTTGTGAAGTTGGTTGGTTACTGTTTAAAGGATGATCACCGGCTTC
TGGTTTATGAGTTCATGCCTCGAGGTAGCGTGGAAAATCCTCTATTTA
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