CN192474

Overview
NameCN192474
Unique NameCN192474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.151e-15
Identity = 43/111 (38.74%), Postives = 66/111 (59.46%), Query Frame = 3
Query:  465 KNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            +   Y DL  AT  F+   ++G GGFG+VFKG      L ++ P     IAVK++     QG +E++ EI  LG+L H NLV L G+C   +  LL+Y+++P GS+++ L+
Sbjct:  353 RRLRYRDLYVATDGFKKTGIIGTGGFGTVFKG-----KLPNSDP-----IAVKKIIPSSRQGVREFVAEIESLGKLRHKNLVNLQGWCKHKNDLLLIYDYIPNGSLDSLLY 453          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.151e-15
Identity = 46/121 (38.02%), Postives = 74/121 (61.16%), Query Frame = 3
Query:  435 EGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            E +I  + +++ F +  ++ AT  F   + LG+GGFG V+KG         T P  G+ +AVKRL++   QG KE+  E+  + +L H NLVKL+G+CL+ + ++LVYEF+   S++  LF
Sbjct:  317 EDDITTAGSLQ-FDFKVIEAATDKFSMCNKLGQGGFGQVYKG---------TLPN-GVQVAVKRLSKTSGQGEKEFKNEVVVVAKLQHRNLVKLLGFCLEREEKILVYEFVSNKSLDYFLF 426          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.151e-15
Identity = 45/108 (41.67%), Postives = 68/108 (62.96%), Query Frame = 3
Query:  483 DLKT---ATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            DLKT   AT  F   ++LG+GGFG VFKG + +          G  IAVKRL++E  QG +E+  E + + +L H NLV ++G+C++ + ++LVYEF+P  S++  LF
Sbjct:  310 DLKTIEAATCTFSKCNMLGQGGFGEVFKGVLQD----------GSEIAVKRLSKESAQGVQEFQNETSLVAKLQHRNLVGVLGFCMEGEEKILVYEFVPNKSLDQFLF 407          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.195e-14
Identity = 43/124 (34.68%), Postives = 73/124 (58.87%), Query Frame = 3
Query:  426 PRSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            P  +   ++S ++K F+   ++ AT  ++  +++GEGGFGSV++G +D+          G  +AVK  +    QG +E+  E+N L  + H NLV L+GYC + D ++LVY FM  GS+ + L+
Sbjct:  571 PSKDDFFIKSVSVKPFTLEYIEQATEQYK--TLIGEGGFGSVYRGTLDD----------GQEVAVKVRSSTSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLY 682          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.195e-14
Identity = 40/109 (36.70%), Postives = 67/109 (61.47%), Query Frame = 3
Query:  471 FSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            FS+  ++ AT  F   +++G GGFG V++G          +  +G  +AVKRL++   QG +E+  E   + +L H NLV+L+G+CL+ + ++LVYEF+P  S++  LF
Sbjct:  333 FSFKTIEAATDKFSDSNMIGRGGFGEVYRG----------KLSSGPEVAVKRLSKTSGQGAEEFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLF 431          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.195e-14
Identity = 41/109 (37.61%), Postives = 67/109 (61.47%), Query Frame = 3
Query:  471 FSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            F ++ ++ AT NF  ++ LG+GGFG V+KG +   +           IAVKRL+    QG +E+  E+  + +L H NLV+L+G+C++ D ++LVYEF+   S++  LF
Sbjct:  327 FDFTTIEVATDNFSRNNKLGQGGFGEVYKGMLPNETE----------IAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCIERDEQILVYEFVSNKSLDYFLF 425          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.195e-14
Identity = 41/111 (36.94%), Postives = 62/111 (55.86%), Query Frame = 3
Query:  465 KNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            + FS S++K  T NF   +V+G GGFG V+KG +D           G  +A+K+ N    QG  E+ TEI  L +L H +LV L+GYC +     L+Y++M  G++   L+
Sbjct:  507 RRFSLSEIKHGTHNFDESNVIGVGGFGKVYKGVIDG----------GTKVAIKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLIYDYMSLGTLREHLY 607          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.561e-14
Identity = 47/124 (37.90%), Postives = 67/124 (54.03%), Query Frame = 3
Query:  426 PRSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHK-EWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPL 794
            P  E   +    +K F+  +L  AT NF   +VLG GGFG V+KG          R   G L+AVKRL +E  +G + ++ TE+  +    H NL++L G+C+    RLLVY +M  GSV + L
Sbjct:  267 PAEEDPEVHLGQLKRFTLRELLVATDNFSNKNVLGRGGFGKVYKG----------RLADGNLVAVKRLKEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL 380          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.561e-14
Identity = 43/124 (34.68%), Postives = 73/124 (58.87%), Query Frame = 3
Query:  426 PRSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            P  +   ++S ++K F+   ++ AT  ++  +++GEGGFGSV++G +D+          G  +AVK  +    QG +E+  E+N L  + H NLV L+GYC + D ++LVY FM  GS+ + L+
Sbjct:  570 PSKDDFFIKSVSVKPFTLEYIELATEKYK--TLIGEGGFGSVYRGTLDD----------GQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLY 681          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.561e-14
Identity = 42/119 (35.29%), Postives = 67/119 (56.30%), Query Frame = 3
Query:  441 EILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            ++  SS    F +  +K AT NF   + LG GGFG+V+KG              G  +A KRL++   QG  E+  E+  + +L H NLV L+G+ ++ + ++LVYEF+P  S+++ LF
Sbjct:  341 DLTASSGSLRFDFRAIKAATSNFHKSNKLGHGGFGAVYKGMFPN----------GTEVAAKRLSKPSDQGEPEFKNEVLLVARLQHKNLVGLLGFSVEGEEKILVYEFVPNKSLDHFLF 449          
The following BLAST results are available for this feature:
BLAST of CN192474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
LRKA1_ARATH9.151e-1538.74Lectin-domain containing receptor kinase A4.1 OS=A... [more]
CRK5_ARATH9.151e-1538.02Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
CRK33_ARATH9.151e-1541.67Putative cysteine-rich receptor-like protein kinas... [more]
NORK_MEDTR1.195e-1434.68Nodulation receptor kinase OS=Medicago truncatula ... [more]
CRK35_ARATH1.195e-1436.70Putative cysteine-rich receptor-like protein kinas... [more]
CRK31_ARATH1.195e-1437.61Putative cysteine-rich receptor-like protein kinas... [more]
ANX2_ARATH1.195e-1436.94Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]
SERK4_ARATH1.561e-1437.90Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
NORK_PEA1.561e-1434.68Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
CRK21_ARATH1.561e-1435.29Cysteine-rich receptor-like protein kinase 21 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006P08_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006P08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192474 ID=CN192474; Name=CN192474; organism=Citrus sinensis; type=EST; length=798bp
CCCCCGCTTTTACAAAAAGAGGGGAAAAGCAAACAAGTAATCAACAATAG
CAAAGACCTTTTTTTTTTTTTTTAACTTCTCATTTGGGTGCTTCTTAATC
CAGAATTGAACCCAAATCCCACCCTAAAAGTGAAAAAGATCACACCCAAA
ATCTATTTGTGATCATTTGTTGAGTTGGAGTTCTGGGTTCTGTTTGTTTC
ATTGAGGATAGAAAGAGAGAGTACAAAACAAAACCATAAAGGAAAAAAAT
TTCTTTAAATAAGATCTGGGTATTTTGTTTTGTCTGGATGGGAGCTTGCT
GTAGCAACAGGATTAAGGCTGAGACTCCTTCTCATACTGATGTGAATTCA
AAATATTCTAGCAGAGATGTAAAGAGTTTAAGCAGTTCCAGTGGTAAGGC
CTCTTCATTTTCCCTGCCTCAAACACCACGGAGTGAGGGTGAGATCTTGC
AGTCATCAAATATAAAGAATTTCAGCTACAGCGACCTTAAGACAGCTACC
AGAAACTTCCGCCCTGATAGTGTTTTGGGAGAAGGCGGCTTTGGTTCTGT
CTTCAAAGGATGGGTTGACGAGCATTCACTTACTTCTACAAGGCCTGGTA
CTGGCATGTTAATTGCTGTGAAGAGGCTTAACCAAGAAGGTTTCCAGGGT
CACAAGGAATGGCTAACAGAAATTAACTATCTTGGGCAGTTGCATCATCC
TAATCTTGTGAAGTTGGTTGGTTACTGTTTAAAGGATGATCACCGGCTTC
TGGTTTATGAGTTCATGCCTCGAGGTAGCGTGGAAAATCCTCTATTTA
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