CN192474

Overview
NameCN192474
Unique NameCN192474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.039e-14
Identity = 41/113 (36.28%), Postives = 70/113 (61.95%), Query Frame = 3
Query:  456 SNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPL 794
            +N ++++Y ++   T NF  +  LGEGGFG V+ G V+++            +AVK L++   QG+K++  E++ L ++HH NLV LVGYC +  H +L+YE+M  G+++  L
Sbjct:  576 ANKRSYTYEEVAVITNNF--ERPLGEGGFGVVYHGNVNDNEQ----------VAVKVLSESSAQGYKQFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHL 676          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.039e-14
Identity = 46/121 (38.02%), Postives = 71/121 (58.68%), Query Frame = 3
Query:  420 QTPRSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSV 782
            Q  R EG +  S   K FS ++L+ AT NF  + VLG+GG G+V+KG + +          G ++AVKR         +E++ E+  L Q++H N+VKL+G CL+ +  +LVYEF+P G +
Sbjct:  398 QLARKEGNVEMS---KIFSSNELEKATDNFNTNRVLGQGGQGTVYKGMLVD----------GRIVAVKRSKAMDEDKVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDL 505          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.039e-14
Identity = 46/124 (37.10%), Postives = 67/124 (54.03%), Query Frame = 3
Query:  426 PRSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHK-EWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPL 794
            P  E   +    +K FS  +L+ AT +F   ++LG GGFG V+KG          R   G L+AVKRL +E   G + ++ TE+  +    H NL++L G+C+    RLLVY +M  GSV + L
Sbjct:  278 PAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKG----------RLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL 391          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.662e-14
Identity = 46/123 (37.40%), Postives = 72/123 (58.54%), Query Frame = 3
Query:  423 TPRSEGEILQSSNI---KNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSV 782
            T +S+     SS I   + F+YS++   T+NF  + VLG+GGFG+V+ G +D+             +AVK L+    QG+KE+  E+  L ++HH +LV LVGYC   D+  L+YE+M +G +
Sbjct:  541 TVKSDARSSSSSIITKERKFTYSEVLKMTKNF--ERVLGKGGFGTVYHGNLDDTQ-----------VAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMEKGDL 650          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.662e-14
Identity = 40/111 (36.04%), Postives = 66/111 (59.46%), Query Frame = 3
Query:  465 KNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            + F+ ++++ AT+NF     +G GGFG V++G +++          G LIA+KR      QG  E+ TEI  L +L H +LV L+G+C + +  +LVYE+M  G++ + LF
Sbjct:  506 RKFTLAEIRAATKNFDDGLAIGVGGFGKVYRGELED----------GTLIAIKRATPHSQQGLAEFETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRSHLF 606          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.662e-14
Identity = 40/99 (40.40%), Postives = 62/99 (62.63%), Query Frame = 3
Query:  471 FSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFM 767
            F YS++   T NF  + V+G+GGFG V+ G ++           G  +AVK L++E  QG+KE+  E++ L ++HH NL  LVGYC + +H +L+YE+M
Sbjct:  564 FKYSEVVNITNNF--ERVIGKGGFGKVYHGVIN-----------GEQVAVKVLSEESAQGYKEFRAEVDLLMRVHHTNLTSLVGYCNEINHMVLIYEYM 649          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.662e-14
Identity = 46/111 (41.44%), Postives = 64/111 (57.66%), Query Frame = 3
Query:  465 KNFSYSDLKTATRNF-RPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPL 794
            K F+YS++   T+N  RP   LGEGGFG V+ G ++              +AVK L+Q   QG+KE+  E+  L ++HH NLV LVGYC + DH  L+YE+M  G +   L
Sbjct:  554 KRFTYSEVMEMTKNLQRP---LGEGGFGVVYHGDLNGSEQ----------VAVKLLSQTSAQGYKEFKAEVELLLRVHHINLVNLVGYCDEQDHFALIYEYMSNGDLHQHL 651          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.662e-14
Identity = 42/109 (38.53%), Postives = 65/109 (59.63%), Query Frame = 3
Query:  471 FSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            F    +  AT  F  ++ LG+GGFG+V+KG +            G  +AVKRL +   QG  E+  E++ L +L H NLVKL+G+C + D ++LVYEF+P  S+++ +F
Sbjct:  341 FDLGMVLAATDEFSSENTLGQGGFGTVYKGTLLN----------GQEVAVKRLTKGSGQGDIEFKNEVSLLTRLQHRNLVKLLGFCNEGDEQILVYEFVPNSSLDHFIF 439          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.477e-14
Identity = 42/109 (38.53%), Postives = 61/109 (55.96%), Query Frame = 3
Query:  471 FSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            F + ++  AT  F   S+LG GGFG V+KG +++          G  +AVKR N    QG  E+ TEI  L +L H +LV L+GYC +    +LVYE+M  G + + L+
Sbjct:  498 FMFQEIMDATNKFDESSLLGVGGFGRVYKGTLED----------GTKVAVKRGNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLY 596          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.477e-14
Identity = 41/107 (38.32%), Postives = 64/107 (59.81%), Query Frame = 3
Query:  477 YSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            ++ +K AT NF     +G GGFG V+KG +++          G  +AVKR N +  QG  E+ TEI  L Q  H +LV L+GYC +++  +L+YE+M  G+V++ L+
Sbjct:  475 FAAVKDATNNFDESRNIGVGGFGKVYKGELND----------GTKVAVKRGNPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMENGTVKSHLY 571          
The following BLAST results are available for this feature:
BLAST of CN192474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
Y4245_ARATH2.039e-1436.28Probable LRR receptor-like serine/threonine-protei... [more]
WAKLD_ARATH2.039e-1438.02Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
SERK2_ARATH2.039e-1437.10Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
Y5189_ARATH2.662e-1437.40Probable LRR receptor-like protein kinase At1g5189... [more]
Y1357_ARATH2.662e-1436.04Probable receptor-like protein kinase At1g30570 OS... [more]
SIRK_ARATH2.662e-1440.40Senescence-induced receptor-like serine/threonine-... [more]
MEE39_ARATH2.662e-1441.44Probable LRR receptor-like serine/threonine-protei... [more]
CRK39_ARATH2.662e-1438.53Putative cysteine-rich receptor-like protein kinas... [more]
THE1_ARATH3.477e-1438.53Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
HERK_ARATH3.477e-1438.32Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006P08_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006P08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192474 ID=CN192474; Name=CN192474; organism=Citrus sinensis; type=EST; length=798bp
CCCCCGCTTTTACAAAAAGAGGGGAAAAGCAAACAAGTAATCAACAATAG
CAAAGACCTTTTTTTTTTTTTTTAACTTCTCATTTGGGTGCTTCTTAATC
CAGAATTGAACCCAAATCCCACCCTAAAAGTGAAAAAGATCACACCCAAA
ATCTATTTGTGATCATTTGTTGAGTTGGAGTTCTGGGTTCTGTTTGTTTC
ATTGAGGATAGAAAGAGAGAGTACAAAACAAAACCATAAAGGAAAAAAAT
TTCTTTAAATAAGATCTGGGTATTTTGTTTTGTCTGGATGGGAGCTTGCT
GTAGCAACAGGATTAAGGCTGAGACTCCTTCTCATACTGATGTGAATTCA
AAATATTCTAGCAGAGATGTAAAGAGTTTAAGCAGTTCCAGTGGTAAGGC
CTCTTCATTTTCCCTGCCTCAAACACCACGGAGTGAGGGTGAGATCTTGC
AGTCATCAAATATAAAGAATTTCAGCTACAGCGACCTTAAGACAGCTACC
AGAAACTTCCGCCCTGATAGTGTTTTGGGAGAAGGCGGCTTTGGTTCTGT
CTTCAAAGGATGGGTTGACGAGCATTCACTTACTTCTACAAGGCCTGGTA
CTGGCATGTTAATTGCTGTGAAGAGGCTTAACCAAGAAGGTTTCCAGGGT
CACAAGGAATGGCTAACAGAAATTAACTATCTTGGGCAGTTGCATCATCC
TAATCTTGTGAAGTTGGTTGGTTACTGTTTAAAGGATGATCACCGGCTTC
TGGTTTATGAGTTCATGCCTCGAGGTAGCGTGGAAAATCCTCTATTTA
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