CN192474

Overview
NameCN192474
Unique NameCN192474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: CRK43_ARATH (Putative cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana GN=CRK43 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.477e-14
Identity = 44/118 (37.29%), Postives = 65/118 (55.08%), Query Frame = 3
Query:  444 ILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            I   S++ +F YS LK AT NF     LG GG+G VFKG + +          G  IA+KRL+  G +   E   EI+ + +  H NLV+L+G C  + +  +VYEF+   S+++ LF
Sbjct:  310 ICTESHLMSFEYSTLKKATNNFNESCKLGVGGYGEVFKGTLSD----------GREIAIKRLHVSGKKPRDEIHNEIDVISRCQHKNLVRLLGCCFTNMNSFIVYEFLANTSLDHILF 417          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.477e-14
Identity = 40/109 (36.70%), Postives = 65/109 (59.63%), Query Frame = 3
Query:  471 FSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            F   D++ AT NF   + +G+GGFG V+KG +            G  +AVKRL++   QG  E+  E+  + +L H NLV+L+G+ L+ + ++LV+EF+P  S++  LF
Sbjct:  334 FDIKDIEAATSNFLASNKIGQGGFGEVYKGTLSN----------GTEVAVKRLSRTSDQGELEFKNEVLLVAKLQHRNLVRLLGFALQGEEKILVFEFVPNKSLDYFLF 432          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.541e-14
Identity = 41/110 (37.27%), Postives = 65/110 (59.09%), Query Frame = 3
Query:  465 KNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPL 794
            +  +YS++   T NF  + V+GEGGFG V+ G++++             +AVK L+    QG+KE+  E+  L ++HH NLV LVGYC +  H  L+YE+M  G +++ L
Sbjct:  561 RRITYSEILLMTNNF--ERVIGEGGFGVVYHGYLNDSEQ----------VAVKVLSPSSSQGYKEFKAEVELLLRVHHINLVSLVGYCDEQAHLALIYEYMANGDLKSHL 658          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.541e-14
Identity = 39/111 (35.14%), Postives = 67/111 (60.36%), Query Frame = 3
Query:  462 IKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPL 794
            ++  +++ L  AT  F  ++++G GGFG V+K  + +          G ++A+K+L +   QG +E++ E+  +G++ H NLV L+GYC   + RLLVYE+M  GS+E  L
Sbjct:  844 LRKLTFAHLLEATNGFSAETMVGSGGFGEVYKAQLRD----------GSVVAIKKLIRITGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWGSLETVL 944          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.931e-14
Identity = 41/107 (38.32%), Postives = 67/107 (62.62%), Query Frame = 3
Query:  465 KNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVE 785
            K ++Y+++   T+ F  + VLG+GGFG V+ G+++         GT   +AVK L+    QG+KE+ TE+  L +++H NLV LVGYC + DH  L+Y++M  G ++
Sbjct:  558 KRYTYAEVLAMTKKF--ERVLGKGGFGMVYHGYIN---------GTEE-VAVKLLSPSSAQGYKEFKTEVELLLRVYHTNLVSLVGYCDEKDHLALIYQYMVNGDLK 652          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.931e-14
Identity = 43/106 (40.57%), Postives = 64/106 (60.38%), Query Frame = 3
Query:  486 LKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGF--QGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            L++ T NF  D++LG GGFG V+KG + +          G  IAVKR+       +G  E+ +EI  L ++ H +LV L+GYCL  + +LLVYE+MP+G++   LF
Sbjct:  581 LRSVTNNFSSDNILGSGGFGVVYKGELHD----------GTKIAVKRMENGVIAGKGFAEFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLF 676          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.746e-14
Identity = 48/129 (37.21%), Postives = 71/129 (55.04%), Query Frame = 3
Query:  423 TPRSEGEILQSSNIKNFSYS----DLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPLF 797
            T  S G  L +S   N SY      +K AT +F  +  +G GGFG V+KG + +          G  +AVKR N +  QG  E+ TEI  L Q  H +LV L+GYC +++  +LVYE+M  G++++ L+
Sbjct:  451 TSSSNGTTL-ASIASNSSYRIPLVAVKEATNSFDENRAIGVGGFGKVYKGELHD----------GTKVAVKRANPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILVYEYMENGTLKSHLY 568          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.746e-14
Identity = 44/124 (35.48%), Postives = 71/124 (57.26%), Query Frame = 3
Query:  432 SEGEILQSS---NIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPL 794
            S G++ +SS     + F+YSD+   T NF+   V+G+GGFG V++G ++               A+K L+    QG+KE+ TE+  L ++HH  LV L+GYC  D+   L+YE M +G+++  L
Sbjct:  534 SAGKVTRSSFKSENRRFTYSDVNKMTNNFQV--VIGKGGFGVVYQGCLNNEQA-----------AIKVLSHSSAQGYKEFKTEVELLLRVHHEKLVSLIGYCDDDNGLALIYELMGKGNLKEHL 644          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.746e-14
Identity = 45/121 (37.19%), Postives = 70/121 (57.85%), Query Frame = 3
Query:  420 QTPRSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHKEWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSV 782
            Q  R EG +  S   + FS  +L+ AT NF  + VLG+GG G+V+KG + +          G ++AVKR         +E++ E+  L Q++H N+VKL+G CL+ +  +LVYEF+P G +
Sbjct:  390 QLARKEGNVEMS---RIFSSHELEKATDNFNKNRVLGQGGQGTVYKGMLVD----------GRIVAVKRSKAVDEDRVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDL 497          
BLAST of CN192474 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 7.746e-14
Identity = 45/124 (36.29%), Postives = 66/124 (53.23%), Query Frame = 3
Query:  426 PRSEGEILQSSNIKNFSYSDLKTATRNFRPDSVLGEGGFGSVFKGWVDEHSLTSTRPGTGMLIAVKRLNQEGFQGHK-EWLTEINYLGQLHHPNLVKLVGYCLKDDHRLLVYEFMPRGSVENPL 794
            P  E   +    +K FS  +L+ A+  F   ++LG GGFG V+KG          R   G L+AVKRL +E   G + ++ TE+  +    H NL++L G+C+    RLLVY +M  GSV + L
Sbjct:  275 PAEEDPEVHLGQLKRFSLRELQVASDGFSNKNILGRGGFGKVYKG----------RLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL 388          
The following BLAST results are available for this feature:
BLAST of CN192474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
CRK43_ARATH3.477e-1437.29Putative cysteine-rich receptor-like protein kinas... [more]
CRK30_ARATH3.477e-1436.70Putative cysteine-rich receptor-like protein kinas... [more]
Y5169_ARATH4.541e-1437.27Probable LRR receptor-like serine/threonine-protei... [more]
BRL1_ARATH4.541e-1435.14Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
Y1756_ARATH5.931e-1438.32Probable LRR receptor-like serine/threonine-protei... [more]
TMK1_ARATH5.931e-1440.57Probable receptor protein kinase TMK1 OS=Arabidops... [more]
Y5597_ARATH7.746e-1437.21Probable receptor-like protein kinase At5g59700 OS... [more]
Y1755_ARATH7.746e-1435.48Probable LRR receptor-like serine/threonine-protei... [more]
WAKLB_ARATH7.746e-1437.19Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
SERK1_ARATH7.746e-1436.29Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006P08_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006P08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192474 ID=CN192474; Name=CN192474; organism=Citrus sinensis; type=EST; length=798bp
CCCCCGCTTTTACAAAAAGAGGGGAAAAGCAAACAAGTAATCAACAATAG
CAAAGACCTTTTTTTTTTTTTTTAACTTCTCATTTGGGTGCTTCTTAATC
CAGAATTGAACCCAAATCCCACCCTAAAAGTGAAAAAGATCACACCCAAA
ATCTATTTGTGATCATTTGTTGAGTTGGAGTTCTGGGTTCTGTTTGTTTC
ATTGAGGATAGAAAGAGAGAGTACAAAACAAAACCATAAAGGAAAAAAAT
TTCTTTAAATAAGATCTGGGTATTTTGTTTTGTCTGGATGGGAGCTTGCT
GTAGCAACAGGATTAAGGCTGAGACTCCTTCTCATACTGATGTGAATTCA
AAATATTCTAGCAGAGATGTAAAGAGTTTAAGCAGTTCCAGTGGTAAGGC
CTCTTCATTTTCCCTGCCTCAAACACCACGGAGTGAGGGTGAGATCTTGC
AGTCATCAAATATAAAGAATTTCAGCTACAGCGACCTTAAGACAGCTACC
AGAAACTTCCGCCCTGATAGTGTTTTGGGAGAAGGCGGCTTTGGTTCTGT
CTTCAAAGGATGGGTTGACGAGCATTCACTTACTTCTACAAGGCCTGGTA
CTGGCATGTTAATTGCTGTGAAGAGGCTTAACCAAGAAGGTTTCCAGGGT
CACAAGGAATGGCTAACAGAAATTAACTATCTTGGGCAGTTGCATCATCC
TAATCTTGTGAAGTTGGTTGGTTACTGTTTAAAGGATGATCACCGGCTTC
TGGTTTATGAGTTCATGCCTCGAGGTAGCGTGGAAAATCCTCTATTTA
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