CN192436

Overview
NameCN192436
Unique NameCN192436
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192436 vs. ExPASy Swiss-Prot
Match: CAMT1_DICDI (Probable caffeoyl-CoA O-methyltransferase 1 OS=Dictyostelium discoideum GN=omt5 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.551e-15
Identity = 47/121 (38.84%), Postives = 71/121 (58.68%), Query Frame = -1
Query:  188 KAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 550
            KAGV HKI+ +  PA   L  LI D+    ++DF+F+DADK  Y  Y++  ++L++ GG+I  DN L +G  VA P+A +   +   R     LN  + AD R+   MLP+ DG+T+  +I
Sbjct:  115 KAGVDHKINLKIQPASKTLQELI-DQGEENTYDFVFIDADKTGYDTYYELSLKLIRKGGIIAIDNVLQHGR-VADPNANVEPNLVAIR----ALNDKILADKRVTKTMLPIADGITLVTKI 229          
BLAST of CN192436 vs. ExPASy Swiss-Prot
Match: CMTD1_MOUSE (Catechol-O-methyltransferase domain-containing protein 1 OS=Mus musculus GN=Comtd1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.332e-15
Identity = 49/129 (37.98%), Postives = 75/129 (58.14%), Query Frame = -1
Query:  188 ELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 574
            +LG P+ ++A V  KID R  PAL  LD L+   +  G+FD   VDADK+N   Y++R ++L++ GGV+     LW G V+ P   P  K V   R+    LN+ +  D R+ I +LP+ DG+++  +I
Sbjct:  141 KLGRPMWKQAEVEQKIDLRLQPALQTLDELLAAGEA-GTFDIAVVDADKENCTAYYERCLQLLRPGGVLAVLRVLWRGEVLQP--QPRNKTVECVRN----LNERILRDARVYISLLPLDDGLSLAFKI 262          
BLAST of CN192436 vs. ExPASy Swiss-Prot
Match: CAMT2_DICDI (Probable caffeoyl-CoA O-methyltransferase 2 OS=Dictyostelium discoideum GN=omt6 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.683e-15
Identity = 46/121 (38.02%), Postives = 71/121 (58.68%), Query Frame = -1
Query:  188 KAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLNYHKRLIELVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGVTICRRI 550
            KAGV HKI+ +  PA   L  LI D+    ++DF+F+DADK  Y  Y++  ++L++ GG+I  DN L +G  VA P+A +   +   R     LN  + AD R+   +LP+ DG+T+  +I
Sbjct:  116 KAGVDHKINLKIQPASKTLQELI-DQGEENTYDFVFIDADKTGYDTYYELSLKLIRKGGIIAIDNVLQHGR-VADPNANVEPNLVAIR----ALNDKILADKRVTKSLLPIADGITLITKI 230          
The following BLAST results are available for this feature:
BLAST of CN192436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
CAMT1_DICDI2.551e-1538.84Probable caffeoyl-CoA O-methyltransferase 1 OS=Dic... [more]
CMTD1_MOUSE3.332e-1537.98Catechol-O-methyltransferase domain-containing pro... [more]
CAMT2_DICDI5.683e-1538.02Probable caffeoyl-CoA O-methyltransferase 2 OS=Dic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006O05_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006O05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192436 ID=CN192436; Name=CN192436; organism=Citrus sinensis; type=EST; length=613bp
GGCCCCCTTTAACAGCCTTAGCCAGAGTCCATTTTGCATCGATAAAATAA
AGTACAACTAATTTGCATTATAAAGAAAAATGCACAAGAGAGGGGAAAAA
AATGGTAAAATCACATGTAGCATTATCTTCGAGGTACCGGTCATCGGCGG
CGGACCCCCTCAGAGAATTGGTTTAGGCATTTCACTTGATCCGACGGCAG
ATAGTGACTCCATCGCCAACGGGGAGCATGCAGATTTCAATCCTGGGGTC
AGCAGCAAGGGCCTTGTTGAGCTCCAAGACGAAGTCTCGGTAATACCTAA
CGTACTTCCTAAGGGGAGCATCAGGTGGTGCCACGACGGATCCGTTCCAT
AGGGTGTTGTCGTACCCGATCACCCCTCCAACCTTCACCAACTCAATCAA
CCTCTTGTGGTAGTTTAGGTAGTTGTCCTTATCAGCGTCCACAAATATGA
AGTCAAAGGACCCATGGTTCTTCTCATCTTGGATCAGCAGGTCAAGAACA
GGCAGGGCAGGGCCTTCTCTGAAGTCAATCTTGTGAGCAACACCAGCTTT
TTGGATAACTGGCAGCCCCAATTCATAAATTTTCTCTGTTGATGGCCATG
GCCAAAAATCTTG
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