CN192403

Overview
NameCN192403
Unique NameCN192403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALF_DICDI (Fructose-bisphosphate aldolase OS=Dictyostelium discoideum GN=fba PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 9.700e-25
Identity = 67/137 (48.91%), Postives = 82/137 (59.85%), Query Frame = -3
Query:  181 LLKPNMVTPGFEAP-KVTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGDPQLGEGAAESFHVKDYKY 588
            LLKPNMV  G + P K T E I + T   L+R +P A+  VVF  GGQ+E EAT  LNAMN L  + P +LSFS G A Q S    W G+  NV+ A+  +L R K N  A LG Y G+   G  A+ES +VKDYKY
Sbjct:  223 LLKPNMVVNGTDCPIKATSEQIGKFTVRTLQRTVPPALTGVVFLSGGQTEIEATANLNAMNVLPNR-PWALSFSYGRALQASVISTWKGESANVEAARKVYLHRAKCNSLAQLGKYTGEESTG-SASESLYVKDYKY 357          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALF_ECHMU (Fructose-bisphosphate aldolase OS=Echinococcus multilocularis GN=FBPA PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.267e-24
Identity = 68/138 (49.28%), Postives = 84/138 (60.87%), Query Frame = -3
Query:  181 TLLKPNMVTPGFEAPK-VTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGDPQLGEGAAESFHVKDYKY 591
            TLLKPNMVT G    K  + E     T  AL+R +P AVP VVF  GGQSE +ATR LNA+N+   KKP +LSFS G A Q S   AW GK ENV+  QA FL   KAN  A+LG ++G+ +   G  +S  V ++ Y
Sbjct:  227 TLLKPNMVTCGQSCTKKYSVEDNARATVEALQRTVPVAVPGVVFLSGGQSELDATRNLNAINKYPGKKPWALSFSFGRALQASAIAAWQGKPENVKAGQAEFLQLAKANGAASLGKFEGELKTAAG-QKSLFVANHAY 363          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALDOA_RABIT (Fructose-bisphosphate aldolase A OS=Oryctolagus cuniculus GN=ALDOA PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.267e-24
Identity = 65/138 (47.10%), Postives = 82/138 (59.42%), Query Frame = -3
Query:  181 TLLKPNMVTPGFEAP-KVTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGDPQLGEGAAESFHVKDYKY 591
            TLLKPNMVTPG     K + E I   T  AL+R +P AV  V F  GGQSEEEA+  LNA+N+    KP +L+FS G A Q S  KAW GK+EN++ AQ  ++ R  AN  A  G Y    Q G  A+ES  + ++ Y
Sbjct:  227 TLLKPNMVTPGHACTQKYSHEEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFISNHAY 364          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALDOA_PANTR (Fructose-bisphosphate aldolase A OS=Pan troglodytes GN=ALDOA PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.267e-24
Identity = 65/138 (47.10%), Postives = 82/138 (59.42%), Query Frame = -3
Query:  181 TLLKPNMVTPGFEAP-KVTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGDPQLGEGAAESFHVKDYKY 591
            TLLKPNMVTPG     K + E I   T  AL+R +P AV  + F  GGQSEEEA+  LNA+N+    KP +L+FS G A Q S  KAW GK+EN++ AQ  ++ R  AN  A  G Y    Q G  A+ES  V ++ Y
Sbjct:  227 TLLKPNMVTPGHACTQKFSHEEIAMATVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALDOA_MOUSE (Fructose-bisphosphate aldolase A OS=Mus musculus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.267e-24
Identity = 65/138 (47.10%), Postives = 82/138 (59.42%), Query Frame = -3
Query:  181 TLLKPNMVTPGFEAP-KVTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGDPQLGEGAAESFHVKDYKY 591
            TLLKPNMVTPG     K + E I   T  AL+R +P AV  V F  GGQSEEEA+  LNA+N+    KP +L+FS G A Q S  KAW GK+EN++ AQ  ++ R  AN  A  G Y    Q G  A+ES  + ++ Y
Sbjct:  227 TLLKPNMVTPGHACTQKFSNEEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLACQGKYTPSGQSGAAASESLFISNHAY 364          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALDOA_HUMAN (Fructose-bisphosphate aldolase A OS=Homo sapiens GN=ALDOA PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.267e-24
Identity = 65/138 (47.10%), Postives = 82/138 (59.42%), Query Frame = -3
Query:  181 TLLKPNMVTPGFEAP-KVTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGDPQLGEGAAESFHVKDYKY 591
            TLLKPNMVTPG     K + E I   T  AL+R +P AV  + F  GGQSEEEA+  LNA+N+    KP +L+FS G A Q S  KAW GK+EN++ AQ  ++ R  AN  A  G Y    Q G  A+ES  V ++ Y
Sbjct:  227 TLLKPNMVTPGHACTQKFSHEEIAMATVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALDOC_RAT (Fructose-bisphosphate aldolase C OS=Rattus norvegicus GN=Aldoc PE=1 SV=3)

HSP 1 Score: 112.464 bits (280), Expect = 1.655e-24
Identity = 64/138 (46.38%), Postives = 82/138 (59.42%), Query Frame = -3
Query:  181 TLLKPNMVTPGFEAP-KVTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGDPQLGEGAAESFHVKDYKY 591
            TLLKPNMVTPG   P K +PE I   T  AL+R +P AVP V F  GGQSEEEA+  LNA+N+    +P +L+FS G A Q S   AW G+ +N   A   F+ R + N  A  G Y+G    G  AA+S +V ++ Y
Sbjct:  227 TLLKPNMVTPGHACPIKYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCSLPRPWALTFSYGRALQASALSAWRGQRDNAGAATEEFIKRAEMNGLAAQGKYEGSGD-GGAAAQSLYVANHAY 363          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALF_DROME (Fructose-bisphosphate aldolase OS=Drosophila melanogaster GN=Ald PE=1 SV=5)

HSP 1 Score: 111.694 bits (278), Expect = 2.822e-24
Identity = 65/127 (51.18%), Postives = 77/127 (60.63%), Query Frame = -3
Query:  214 TLLKPNMVTPGFEAPKVTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIY-KGDPQLGEGA 591
            TLLKPNMVT G  A K TPE I   T  AL+R +PAAV  V F  GGQSEEEAT  L+A+N +   +P +L+FS G A Q S  +AWAGK+EN+   Q   L R KAN  A  G Y  G    G G+
Sbjct:  227 TLLKPNMVTAGQSAKKNTPEEIALATVQALRRTVPAAVTGVTFLSGGQSEEEATVNLSAINNVPLIRPWALTFSYGRALQASVLRAWAGKKENIAAGQNELLKRAKANGDAAQGKYVAGSAGAGSGS 353          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALDOC_MOUSE (Fructose-bisphosphate aldolase C OS=Mus musculus GN=Aldoc PE=1 SV=4)

HSP 1 Score: 111.694 bits (278), Expect = 2.822e-24
Identity = 63/138 (45.65%), Postives = 82/138 (59.42%), Query Frame = -3
Query:  181 TLLKPNMVTPGFEAP-KVTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGDPQLGEGAAESFHVKDYKY 591
            TLLKPNMVTPG   P K +PE I   T  AL+R +P AVP V F  GGQSEEEA+  LNA+N+    +P +L+FS G A Q S   AW G+ +N   A   F+ R + N  A  G Y+G    G  AA+S ++ ++ Y
Sbjct:  227 TLLKPNMVTPGHACPIKYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEMNGLAAQGRYEGSGD-GGAAAQSLYIANHAY 363          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALDOB_CHICK (Fructose-bisphosphate aldolase B OS=Gallus gallus GN=ALDOB PE=3 SV=3)

HSP 1 Score: 111.694 bits (278), Expect = 2.822e-24
Identity = 65/138 (47.10%), Postives = 75/138 (54.35%), Query Frame = -3
Query:  181 TLLKPNMVTPGFEAPK-VTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGDPQLGEGAAESFHVKDYKY 591
            TLLKPNMVT G   PK  TP+ +   T   L R +PAAVP + F  GGQSEEEA+  LNAMNQ    KP  L+FS G A Q S   AW GK EN + AQ AF  R + N  A  G Y    +    A +S     Y Y
Sbjct:  227 TLLKPNMVTAGHSCPKKYTPQDVAVATVTTLLRTVPAAVPGICFLSGGQSEEEASLNLNAMNQSPLPKPWKLTFSYGRALQASALAAWLGKSENKKAAQEAFCKRAQINSLACRGQYVTSGKTDTAATQSLFTASYTY 364          
The following BLAST results are available for this feature:
BLAST of CN192403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
ALF_DICDI9.700e-2548.91Fructose-bisphosphate aldolase OS=Dictyostelium di... [more]
ALF_ECHMU1.267e-2449.28Fructose-bisphosphate aldolase OS=Echinococcus mul... [more]
ALDOA_RABIT1.267e-2447.10Fructose-bisphosphate aldolase A OS=Oryctolagus cu... [more]
ALDOA_PANTR1.267e-2447.10Fructose-bisphosphate aldolase A OS=Pan troglodyte... [more]
ALDOA_MOUSE1.267e-2447.10Fructose-bisphosphate aldolase A OS=Mus musculus G... [more]
ALDOA_HUMAN1.267e-2447.10Fructose-bisphosphate aldolase A OS=Homo sapiens G... [more]
ALDOC_RAT1.655e-2446.38Fructose-bisphosphate aldolase C OS=Rattus norvegi... [more]
ALF_DROME2.822e-2451.18Fructose-bisphosphate aldolase OS=Drosophila melan... [more]
ALDOC_MOUSE2.822e-2445.65Fructose-bisphosphate aldolase C OS=Mus musculus G... [more]
ALDOB_CHICK2.822e-2447.10Fructose-bisphosphate aldolase B OS=Gallus gallus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006N11_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006N11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192403 ID=CN192403; Name=CN192403; organism=Citrus sinensis; type=EST; length=593bp
TTTTTTTTTTTTTTTTTGAACAAAACCCCTCAAACCGAAATTCCCAAGCT
TTTTATTGCTCCCCCTAAATATGAAAAAGCTCTAAAACTTTGAATGAAAA
TGGGCCCACCTAATGTTCATACCCCCCTTTACTCTCATAAAGTTCATAAA
GCACAACACCCAAAGCTTCAACTGGGCTTAATATTTGTAGTCCTTGACAT
GGAAAGACTCTGCGGCACCTTCACCAAGCTGGGGATCCCCCTTGTAAATA
CCGAGGGTAGCCCCAAAATTGGCCTTGCCCCTGAAAAGGAAAGCAGCCTG
GGCCTTCTGCACATTCTCTTCCTTTCCAGCCCATGCCTTGAAAGTGCTCT
GCTGAAATGCACCTCCCAAGGAAAAAGAAAGTGACCCTGGCTTCTTCCTC
TTGAGCTGGTTCATGGCATTAAGGGTGCGGGTAGCCTCCTCCTCACTCTG
CCCACCAAAAAAAAACACAACCGCCGGAACTGCTGCCGGCATAATGCGTT
TCAGGGCCCCGAAAGTGTGTTCAACAATCACCTCCGGGGTAACTTTGGGA
GCTTCAAATCCAGGGGTCACCATGTTGGGCTTCAAAAGGGTAC
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