CN192403

Overview
NameCN192403
Unique NameCN192403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALDOB_PONAB (Fructose-bisphosphate aldolase B OS=Pongo abelii GN=ALDOB PE=2 SV=3)

HSP 1 Score: 106.686 bits (265), Expect = 9.079e-23
Identity = 63/138 (45.65%), Postives = 72/138 (52.17%), Query Frame = -3
Query:  181 TLLKPNMVTPGFEAPK-VTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGDPQLGEGAAESFHVKDYKY 591
            TLLKPNMVT G    K  TPE +   T  AL R +PAAVP + F  GG SEE+AT  LNA+N     KP  LSFS G A Q S   AW GK  N +  Q AF+ R  AN  A  G Y      G  + +S     Y Y
Sbjct:  227 TLLKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAANKEATQEAFMKRAVANHQAAKGQYVHTGSSGAASTQSLFTACYTY 364          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALDOB_HUMAN (Fructose-bisphosphate aldolase B OS=Homo sapiens GN=ALDOB PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 9.079e-23
Identity = 63/138 (45.65%), Postives = 72/138 (52.17%), Query Frame = -3
Query:  181 TLLKPNMVTPGFEAPK-VTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGDPQLGEGAAESFHVKDYKY 591
            TLLKPNMVT G    K  TPE +   T  AL R +PAAVP + F  GG SEE+AT  LNA+N     KP  LSFS G A Q S   AW GK  N +  Q AF+ R  AN  A  G Y      G  + +S     Y Y
Sbjct:  227 TLLKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAANKEATQEAFMKRAMANCQAAKGQYVHTGSSGAASTQSLFTACYTY 364          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALDOB_SHEEP (Fructose-bisphosphate aldolase B OS=Ovis aries GN=ALDOB PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.186e-22
Identity = 63/138 (45.65%), Postives = 72/138 (52.17%), Query Frame = -3
Query:  181 TLLKPNMVTPGFEAPK-VTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGDPQLGEGAAESFHVKDYKY 591
            TLLKPNMVT G    K  TPE +   T  AL R +PAAVP + F  GG SEE+AT  LNA+N     KP  LSFS G A Q S   AW GK EN +  Q AF+ R  AN  A  G Y         + +S     Y Y
Sbjct:  227 TLLKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKATQEAFMKRALANSQAAKGQYVHMGSSDSASTQSLFTASYTY 364          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALDOB_RAT (Fructose-bisphosphate aldolase B OS=Rattus norvegicus GN=Aldob PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.004e-21
Identity = 60/138 (43.48%), Postives = 73/138 (52.90%), Query Frame = -3
Query:  181 TLLKPNMVTPGFEAPK-VTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGDPQLGEGAAESFHVKDYKY 591
            TLLKPNM+T G    K  TPE +   T  AL R +PAAVP++ F  GG SEE+AT  LNA+ +    +P  LSFS G A Q S   AW GK  N +  Q AF+ R  AN  A  G Y      G  + +S     Y Y
Sbjct:  227 TLLKPNMLTAGHACTKKYTPEQVAMATVTALHRTVPAAVPSICFLSGGMSEEDATLNLNAIYRCPLPRPWKLSFSYGRALQASALAAWGGKAANKKATQEAFMKRAVANCQAAQGQYVHTGSSGAASTQSLFTASYTY 364          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALF_SCHMA (Fructose-bisphosphate aldolase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.814e-21
Identity = 56/120 (46.67%), Postives = 72/120 (60.00%), Query Frame = -3
Query:  235 TLLKPNMVTPGFEAPKV-TPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGD 591
            TLLKPNMVT G    K  TP+     T  AL+R +P AVP + F  GGQSE +AT+ LN +N++   KP +L+FS G A Q S    W GK+ENV  AQ   L   KAN  A +G ++G+
Sbjct:  227 TLLKPNMVTAGQACKKAYTPQENALATVRALQRTVPPAVPGITFLSGGQSELDATKNLNEINKIPGPKPWALTFSFGRALQASVLATWKGKKENVHAAQEELLKLAKANGAAAVGKFEGN 346          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALDOC_CARAU (Fructose-bisphosphate aldolase C OS=Carassius auratus GN=aldoc PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.110e-20
Identity = 62/138 (44.93%), Postives = 77/138 (55.80%), Query Frame = -3
Query:  181 TLLKPNMVTPGFEAP-KVTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGDPQLGEGAAESFHVKDYKY 591
            TLLKPNMVT G   P K + + I   T  AL+R +P AV  V F  GGQSEEEA+  LNA+N     KP +L+FS G A Q S   AW G +EN + A   FL R +AN  A  G Y      G  A +S +V ++ Y
Sbjct:  227 TLLKPNMVTAGHSCPTKFSNQEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINNCPLTKPWALTFSYGRALQASALSAWRGVKENEKAATEEFLKRAEANGLAAQGKYVSSGMDG-SAGQSLYVANHAY 363          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALDCA_DANRE (Fructose-bisphosphate aldolase C-A OS=Danio rerio GN=aldoca PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.229e-20
Identity = 58/138 (42.03%), Postives = 74/138 (53.62%), Query Frame = -3
Query:  181 TLLKPNMVTPGFEAP-KVTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGDPQLGEGAAESFHVKDYKY 591
            TLLKPNMVTPG   P K + E +   T  AL+R +P AV  V F  GGQSEEEA+  L+A+N  +  KP +L+FS G A Q S  K W G+ EN   A   F+ R + N  A+ G Y            S ++  Y Y
Sbjct:  227 TLLKPNMVTPGHGCPTKYSAEEVAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLSAINNCRLVKPWALTFSFGRALQASALKTWRGQRENEAAATEEFIKRAEINSLASQGKYTVCGDSSGATGLSHYLSSYAY 364          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALF2_PLABA (Fructose-bisphosphate aldolase 2 OS=Plasmodium berghei (strain Anka) GN=ALDO2 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.217e-20
Identity = 61/136 (44.85%), Postives = 78/136 (57.35%), Query Frame = -3
Query:  181 LKPNMVTPGFEAPKVTP-EVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGDPQLGEGAAESFHVKDYKY 585
            LKPNMVT G++  + T  + I   T   L+R +P A+P V F  GGQSEE+A+  LN++N L    P +L+FS G A Q S    W GK+ENV KA+   L R +AN  AT G YKG    G  A  S + K Y Y
Sbjct:  225 LKPNMVTAGYDCTEKTKTDDIGFFTVRTLRRTVPPALPGVAFLSGGQSEEDASINLNSINVLG-PHPWALTFSYGRALQASVLNTWQGKKENVAKARRVLLQRAEANSLATYGKYKGGAG-GSTAGASLYEKKYVY 358          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALDCB_DANRE (Fructose-bisphosphate aldolase C-B OS=Danio rerio GN=aldocb PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.217e-20
Identity = 60/138 (43.48%), Postives = 75/138 (54.35%), Query Frame = -3
Query:  181 TLLKPNMVTPGFEAP-KVTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGDPQLGEGAAESFHVKDYKY 591
            TLLKPNMVT G   P K + E I   T  AL+R +P AV  V F  GGQSEEEA+  LN++N     KP  L+FS G A Q S   AW G + N + A   F+ R +AN  A  G Y      G  A +S +V ++ Y
Sbjct:  227 TLLKPNMVTAGHSCPTKYSSEEIAMATVTALRRTVPPAVSGVTFLSGGQSEEEASVNLNSINNCPLAKPWPLTFSYGRALQASALSAWRGAKSNEKAATEEFIKRAEANGLAAQGKYVSSGTCG-AAGQSLYVANHAY 363          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALF_LYMST (Fructose-bisphosphate aldolase (Fragment) OS=Lymnaea stagnalis PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.508e-20
Identity = 53/93 (56.99%), Postives = 60/93 (64.52%), Query Frame = -3
Query:  316 TLLKPNMVTPGFEAPK-VTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEE 591
            TLLKPNMVT G   PK  TPE I   T  AL R +PAAV  + F  GGQSEE+AT  LNA+NQ   +KP  L+FS G A Q S  KAW GK+E
Sbjct:    8 TLLKPNMVTAGQGCPKKYTPEDIARATVTALNRTVPAAVAGITFLSGGQSEEDATINLNAINQFPGRKPWPLTFSYGRALQASVLKAWGGKDE 100          
The following BLAST results are available for this feature:
BLAST of CN192403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
ALDOB_PONAB9.079e-2345.65Fructose-bisphosphate aldolase B OS=Pongo abelii G... [more]
ALDOB_HUMAN9.079e-2345.65Fructose-bisphosphate aldolase B OS=Homo sapiens G... [more]
ALDOB_SHEEP1.186e-2245.65Fructose-bisphosphate aldolase B OS=Ovis aries GN=... [more]
ALDOB_RAT1.004e-2143.48Fructose-bisphosphate aldolase B OS=Rattus norvegi... [more]
ALF_SCHMA3.814e-2146.67Fructose-bisphosphate aldolase OS=Schistosoma mans... [more]
ALDOC_CARAU1.110e-2044.93Fructose-bisphosphate aldolase C OS=Carassius aura... [more]
ALDCA_DANRE3.229e-2042.03Fructose-bisphosphate aldolase C-A OS=Danio rerio ... [more]
ALF2_PLABA4.217e-2044.85Fructose-bisphosphate aldolase 2 OS=Plasmodium ber... [more]
ALDCB_DANRE4.217e-2043.48Fructose-bisphosphate aldolase C-B OS=Danio rerio ... [more]
ALF_LYMST5.508e-2056.99Fructose-bisphosphate aldolase (Fragment) OS=Lymna... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006N11_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006N11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192403 ID=CN192403; Name=CN192403; organism=Citrus sinensis; type=EST; length=593bp
TTTTTTTTTTTTTTTTTGAACAAAACCCCTCAAACCGAAATTCCCAAGCT
TTTTATTGCTCCCCCTAAATATGAAAAAGCTCTAAAACTTTGAATGAAAA
TGGGCCCACCTAATGTTCATACCCCCCTTTACTCTCATAAAGTTCATAAA
GCACAACACCCAAAGCTTCAACTGGGCTTAATATTTGTAGTCCTTGACAT
GGAAAGACTCTGCGGCACCTTCACCAAGCTGGGGATCCCCCTTGTAAATA
CCGAGGGTAGCCCCAAAATTGGCCTTGCCCCTGAAAAGGAAAGCAGCCTG
GGCCTTCTGCACATTCTCTTCCTTTCCAGCCCATGCCTTGAAAGTGCTCT
GCTGAAATGCACCTCCCAAGGAAAAAGAAAGTGACCCTGGCTTCTTCCTC
TTGAGCTGGTTCATGGCATTAAGGGTGCGGGTAGCCTCCTCCTCACTCTG
CCCACCAAAAAAAAACACAACCGCCGGAACTGCTGCCGGCATAATGCGTT
TCAGGGCCCCGAAAGTGTGTTCAACAATCACCTCCGGGGTAACTTTGGGA
GCTTCAAATCCAGGGGTCACCATGTTGGGCTTCAAAAGGGTAC
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