CN192403

Overview
NameCN192403
Unique NameCN192403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALF_TRYBB (Fructose-bisphosphate aldolase, glycosomal OS=Trypanosoma brucei brucei GN=ALD PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 4.663e-19
Identity = 53/116 (45.69%), Postives = 65/116 (56.03%), Query Frame = -3
Query:  244 LLKPNMVTPGFEAP-KVTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIY 588
            LLKPNMV PG E+  K   E + E+T   L R++P A+P V F  GG SE  A+  LNAMN     +P  L+FS   A Q S  K W GKE  V+  + AF+ R K N  A LG Y
Sbjct:  238 LLKPNMVVPGAESGLKGHAEQVAEYTVKTLARVIPPALPGVTFLSGGLSEVMASEYLNAMNNCPLPRPWKLTFSYARALQSSAIKRWGGKESGVEAGRRAFMHRAKMNSLAQLGKY 353          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFA (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa GN=XF_0826 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.188e-14
Identity = 50/120 (41.67%), Postives = 68/120 (56.67%), Query Frame = -3
Query:  238 TLLKPNMVTPGFEAPK-VTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWA-GKEENVQKAQAAFLFRGKANFGATLGIYKG 591
            T+LK +MV PG +  +  + + + E T   LK  +PA +P +VF  GGQ++ ++T  LNAMNQL    P  LSFS G A QQ+  K W+   + N  KAQ     R K N  A LG +KG
Sbjct:  216 TILKASMVIPGTDCEEQASIDEVAESTVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQLD-PLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERAKENGLAALGKWKG 334          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFT (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=PD_1845 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.458e-14
Identity = 49/120 (40.83%), Postives = 67/120 (55.83%), Query Frame = -3
Query:  238 TLLKPNMVTPGFEAPK-VTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWA-GKEENVQKAQAAFLFRGKANFGATLGIYKG 591
            T+LK +MV PG +  +  + + + E T   LK  +PA +P +VF  GGQ++ ++T  LNAMNQ     P  LSFS G A QQ+  K W+   + N  KAQ     R K N  A LG +KG
Sbjct:  216 TILKASMVIPGTDCEEQASIDEVAESTVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQFD-PLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERAKENGLAALGKWKG 334          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALF1_XANAC (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas axonopodis pv. citri GN=XAC3344 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.716e-13
Identity = 50/120 (41.67%), Postives = 65/120 (54.17%), Query Frame = -3
Query:  238 TLLKPNMVTPGFEAPK-VTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWA-GKEENVQKAQAAFLFRGKANFGATLGIYKG 591
            T+LK +MV  G    +  + E + E T   LK  +PA +P +VF  GGQ++E++T  LN M+QL    P  LSFS G A QQ+  K WA     N  KAQ     R K N  A LG +KG
Sbjct:  216 TILKASMVISGKSCEEQASIEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQL-GNLPWPLSFSYGRAMQQAALKLWAKDMTGNFAKAQQVIYERAKENGLAALGKWKG 334          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALF1_XANCP (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas campestris pv. campestris GN=XCC3185 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.521e-13
Identity = 49/120 (40.83%), Postives = 65/120 (54.17%), Query Frame = -3
Query:  238 TLLKPNMVTPGFEAPK-VTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWA-GKEENVQKAQAAFLFRGKANFGATLGIYKG 591
            T+LK +MV  G    +  + E + E T   LK  +PA +P +VF  GGQ++E++T  LN M+QL    P  LSFS G A QQ+  K W+     N  KAQ     R K N  A LG +KG
Sbjct:  216 TILKASMVISGKGCEEQASVEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQL-GNLPWPLSFSYGRAMQQAALKLWSKDMTGNYAKAQQIIYERAKENGLAALGKWKG 334          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.112e-12
Identity = 50/129 (38.76%), Postives = 64/129 (49.61%), Query Frame = -3
Query:  202 LKPNMVTPG-FEAPKVTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGDPQLGEGAAESF 585
            LKP+MV PG   A K  PE + ++    L R     VP ++   GGQSE EAT  LNAMNQ     P  +SFS   A Q +  K W   +ENV+    A     K+N  A LG Y G+ +  E   + F
Sbjct:  264 LKPSMVGPGALSARKGPPEQVADYPLKLLHRRRGPVVPGIMVLSGGQSEVEATLNLNAMNQ--SPNPWHVSFSYARALQNTCLKTWVEGQENVKAQDFAC---AKSNSLAQLGKYTGEGESEERKKDMF 387          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.227e-12
Identity = 53/137 (38.69%), Postives = 66/137 (48.18%), Query Frame = -3
Query:  181 LLKPNMVTPGFEAP-KVTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGDPQLGEGAAESFHVKDYKY 588
            LLKP MVTPG +   K  P  + E+T   L    P  VP ++F  GGQSE E+T  LNAMNQ     P  +SFS   A   +  K W      VQ  + A   R KAN  A  G Y    + G+ AA+  + K   Y
Sbjct:  241 LLKPAMVTPGADCKNKAGPAKVAEYTLKMLAARAPP-VPGIMFLSGGQSELESTLNLNAMNQ--SPNPWHVSFSYARALTNTVLKTWQASPRTVQAPRLAAQAR-KANSDAQQGKYDATTE-GKEAAQGMYEKGKGY 372          
The following BLAST results are available for this feature:
BLAST of CN192403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
ALF_TRYBB4.663e-1945.69Fructose-bisphosphate aldolase, glycosomal OS=Tryp... [more]
ALF1_XYLFA1.188e-1441.67Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XYLFT3.458e-1440.83Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XANAC1.716e-1341.67Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XANCP6.521e-1340.83Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALFC_SPIOL1.112e-1238.76Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALFC_CHLRE4.227e-1238.69Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006N11_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006N11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192403 ID=CN192403; Name=CN192403; organism=Citrus sinensis; type=EST; length=593bp
TTTTTTTTTTTTTTTTTGAACAAAACCCCTCAAACCGAAATTCCCAAGCT
TTTTATTGCTCCCCCTAAATATGAAAAAGCTCTAAAACTTTGAATGAAAA
TGGGCCCACCTAATGTTCATACCCCCCTTTACTCTCATAAAGTTCATAAA
GCACAACACCCAAAGCTTCAACTGGGCTTAATATTTGTAGTCCTTGACAT
GGAAAGACTCTGCGGCACCTTCACCAAGCTGGGGATCCCCCTTGTAAATA
CCGAGGGTAGCCCCAAAATTGGCCTTGCCCCTGAAAAGGAAAGCAGCCTG
GGCCTTCTGCACATTCTCTTCCTTTCCAGCCCATGCCTTGAAAGTGCTCT
GCTGAAATGCACCTCCCAAGGAAAAAGAAAGTGACCCTGGCTTCTTCCTC
TTGAGCTGGTTCATGGCATTAAGGGTGCGGGTAGCCTCCTCCTCACTCTG
CCCACCAAAAAAAAACACAACCGCCGGAACTGCTGCCGGCATAATGCGTT
TCAGGGCCCCGAAAGTGTGTTCAACAATCACCTCCGGGGTAACTTTGGGA
GCTTCAAATCCAGGGGTCACCATGTTGGGCTTCAAAAGGGTAC
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