CN192389
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN192389 vs. ExPASy Swiss-Prot
Match: UB2E3_MOUSE (Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 4.614e-34 Identity = 69/108 (63.89%), Postives = 84/108 (77.78%), Query Frame = -2 Query: 240 GPFDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFPPNINSNGSICLDILKEPWSPALTLSKVLLSICSLLTDPNPDDPLVPEIAHKYKSDKAKYESPARSWTQKYA 563 GP S Y GGVF + I F DYPFKPPKV FRT+++ NINS G ICLDILK+ WSPALT+SKVLLSICSLLTD NP DPLV IA +Y +++A+++ AR WT++YA Sbjct: 99 GPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYA 206
BLAST of CN192389 vs. ExPASy Swiss-Prot
Match: UB2E3_HUMAN (Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 4.614e-34 Identity = 69/108 (63.89%), Postives = 84/108 (77.78%), Query Frame = -2 Query: 240 GPFDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFPPNINSNGSICLDILKEPWSPALTLSKVLLSICSLLTDPNPDDPLVPEIAHKYKSDKAKYESPARSWTQKYA 563 GP S Y GGVF + I F DYPFKPPKV FRT+++ NINS G ICLDILK+ WSPALT+SKVLLSICSLLTD NP DPLV IA +Y +++A+++ AR WT++YA Sbjct: 99 GPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYA 206
BLAST of CN192389 vs. ExPASy Swiss-Prot
Match: UB2E3_BOVIN (Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 4.614e-34 Identity = 69/108 (63.89%), Postives = 84/108 (77.78%), Query Frame = -2 Query: 240 GPFDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFPPNINSNGSICLDILKEPWSPALTLSKVLLSICSLLTDPNPDDPLVPEIAHKYKSDKAKYESPARSWTQKYA 563 GP S Y GGVF + I F DYPFKPPKV FRT+++ NINS G ICLDILK+ WSPALT+SKVLLSICSLLTD NP DPLV IA +Y +++A+++ AR WT++YA Sbjct: 99 GPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYA 206
BLAST of CN192389 vs. ExPASy Swiss-Prot
Match: UBC31_ARATH (Probable ubiquitin carrier protein E2 31 OS=Arabidopsis thaliana GN=UBC31 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 4.774e-31 Identity = 59/108 (54.63%), Postives = 81/108 (75.00%), Query Frame = -2 Query: 240 GPFDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFPPNINSNGSICLDILKEPWSPALTLSKVLLSICSLLTDPNPDDPLVPEIAHKYKSDKAKYESPARSWTQKYA 563 GP +PY GG+F ++I FP DYPFKPPK F+T ++ PNIN GSIC++ILK+ W+PAL + KVLLSI LL PNPDDPLVPEI +K+++ +++ AR +T ++A Sbjct: 45 GPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNILKDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQRAREFTARHA 152
BLAST of CN192389 vs. ExPASy Swiss-Prot
Match: UBE2N_DROME (Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.698e-28 Identity = 58/109 (53.21%), Postives = 77/109 (70.64%), Query Frame = -2 Query: 237 GPFDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFPPNINSNGSICLDILKEPWSPALTLSKVLLSICSLLTDPNPDDPLVPEIAHKYKSDKAKYESPARSWTQKYAL 563 GP DSP+ GGVF + + P DYP PKV F TK++ PNI+ G ICLD+LK+ WSPAL + +LLSI +LL+ PNPDDPL ++A +K ++A+ AR WTQKYA+ Sbjct: 41 GPNDSPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAREWTQKYAV 149
BLAST of CN192389 vs. ExPASy Swiss-Prot
Match: UBE2N_MACFA (Ubiquitin-conjugating enzyme E2 N OS=Macaca fascicularis GN=UBE2N PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 2.896e-28 Identity = 55/109 (50.46%), Postives = 79/109 (72.48%), Query Frame = -2 Query: 237 GPFDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFPPNINSNGSICLDILKEPWSPALTLSKVLLSICSLLTDPNPDDPLVPEIAHKYKSDKAKYESPARSWTQKYAL 563 GP DSP+ GG F + + P +YP PKV F TK++ PN++ +G ICLDILK+ WSPAL + VLLSI +LL+ PNPDDPL ++A ++K+++A+ AR+WT+ YA+ Sbjct: 41 GPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKSGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 149
BLAST of CN192389 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 3.783e-28 Identity = 56/109 (51.38%), Postives = 78/109 (71.56%), Query Frame = -2 Query: 237 GPFDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFPPNINSNGSICLDILKEPWSPALTLSKVLLSICSLLTDPNPDDPLVPEIAHKYKSDKAKYESPARSWTQKYAL 563 GP DSP+ GG F + + P +YP PKV F TK++ PN++ G ICLDILK+ WSPAL + VLLSI +LL+ PNPDDPL ++A ++KS++A+ AR+WT+ YA+ Sbjct: 41 GPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKSNEAQAIETARAWTRLYAM 149
BLAST of CN192389 vs. ExPASy Swiss-Prot
Match: UBE2N_PONAB (Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 8.427e-28 Identity = 55/109 (50.46%), Postives = 78/109 (71.56%), Query Frame = -2 Query: 237 GPFDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFPPNINSNGSICLDILKEPWSPALTLSKVLLSICSLLTDPNPDDPLVPEIAHKYKSDKAKYESPARSWTQKYAL 563 GP DSP+ GG F + + P +YP PKV F TK++ PN++ G ICLDILK+ WSPAL + VLLSI +LL+ PNPDDPL ++A ++K+++A+ AR+WT+ YA+ Sbjct: 41 GPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 149
BLAST of CN192389 vs. ExPASy Swiss-Prot
Match: UBE2N_MOUSE (Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 8.427e-28 Identity = 55/109 (50.46%), Postives = 78/109 (71.56%), Query Frame = -2 Query: 237 GPFDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFPPNINSNGSICLDILKEPWSPALTLSKVLLSICSLLTDPNPDDPLVPEIAHKYKSDKAKYESPARSWTQKYAL 563 GP DSP+ GG F + + P +YP PKV F TK++ PN++ G ICLDILK+ WSPAL + VLLSI +LL+ PNPDDPL ++A ++K+++A+ AR+WT+ YA+ Sbjct: 41 GPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 149
BLAST of CN192389 vs. ExPASy Swiss-Prot
Match: UBE2N_HUMAN (Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens GN=UBE2N PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 8.427e-28 Identity = 55/109 (50.46%), Postives = 78/109 (71.56%), Query Frame = -2 Query: 237 GPFDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFPPNINSNGSICLDILKEPWSPALTLSKVLLSICSLLTDPNPDDPLVPEIAHKYKSDKAKYESPARSWTQKYAL 563 GP DSP+ GG F + + P +YP PKV F TK++ PN++ G ICLDILK+ WSPAL + VLLSI +LL+ PNPDDPL ++A ++K+++A+ AR+WT+ YA+ Sbjct: 41 GPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 149 The following BLAST results are available for this feature:
BLAST of CN192389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 238
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Sequences
The
following sequences are available for this feature:
EST sequence >CN192389 ID=CN192389; Name=CN192389; organism=Citrus sinensis; type=EST; length=564bpback to top |