CN192358
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN192358 vs. ExPASy Swiss-Prot
Match: E4PD_YERPN (D-erythrose-4-phosphate dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=epd PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.874e-30 Identity = 75/234 (32.05%), Postives = 125/234 (53.42%), Query Frame = 1 Query: 31 TLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA---DAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFD 723 +L + +I++ + + ++PW + G+D V++ SGV+ + AH+ GAKKV+ + P DA + V GVN + + IVSNASCTTNC+ P+ +++ +GI G + D +D R R ASQ+IIP T A + ++ P + ++ RVPT NV+ +DL+ + +V ++ A+ G+ +GI+ YT+ +VS DF D S+I D Sbjct: 67 SLYVGDDIIRLIHQSEIEQLPWSELGIDVVLDCSGVYGSREDGEAHVASGAKKVLFAHPGGHDLDATV-VYGVNHQDLRAEHRIVSNASCTTNCIIPIIQLLDIAYGIESGTVTTIHSSMNDQPVIDAYH-QDLRRTRAASQSIIPVDTKLAAGITRIFPKFCDRFEAISVRVPTINVTAIDLSVSVTHPVGVAEVNQLLQKAARGAFRGIVDYTELPLVSMDFNHDPHSAIVD 298
BLAST of CN192358 vs. ExPASy Swiss-Prot
Match: E4PD_YERPE (D-erythrose-4-phosphate dehydrogenase OS=Yersinia pestis GN=epd PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.874e-30 Identity = 75/234 (32.05%), Postives = 125/234 (53.42%), Query Frame = 1 Query: 31 TLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA---DAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFD 723 +L + +I++ + + ++PW + G+D V++ SGV+ + AH+ GAKKV+ + P DA + V GVN + + IVSNASCTTNC+ P+ +++ +GI G + D +D R R ASQ+IIP T A + ++ P + ++ RVPT NV+ +DL+ + +V ++ A+ G+ +GI+ YT+ +VS DF D S+I D Sbjct: 67 SLYVGDDIIRLIHQSEIEQLPWSELGIDVVLDCSGVYGSREDGEAHVASGAKKVLFAHPGGHDLDATV-VYGVNHQDLRAEHRIVSNASCTTNCIIPIIQLLDIAYGIESGTVTTIHSSMNDQPVIDAYH-QDLRRTRAASQSIIPVDTKLAAGITRIFPKFCDRFEAISVRVPTINVTAIDLSVSVTHPVGVAEVNQLLQKAARGAFRGIVDYTELPLVSMDFNHDPHSAIVD 298
BLAST of CN192358 vs. ExPASy Swiss-Prot
Match: E4PD_YERPA (D-erythrose-4-phosphate dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=epd PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.874e-30 Identity = 75/234 (32.05%), Postives = 125/234 (53.42%), Query Frame = 1 Query: 31 TLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA---DAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFD 723 +L + +I++ + + ++PW + G+D V++ SGV+ + AH+ GAKKV+ + P DA + V GVN + + IVSNASCTTNC+ P+ +++ +GI G + D +D R R ASQ+IIP T A + ++ P + ++ RVPT NV+ +DL+ + +V ++ A+ G+ +GI+ YT+ +VS DF D S+I D Sbjct: 67 SLYVGDDIIRLIHQSEIEQLPWSELGIDVVLDCSGVYGSREDGEAHVASGAKKVLFAHPGGHDLDATV-VYGVNHQDLRAEHRIVSNASCTTNCIIPIIQLLDIAYGIESGTVTTIHSSMNDQPVIDAYH-QDLRRTRAASQSIIPVDTKLAAGITRIFPKFCDRFEAISVRVPTINVTAIDLSVSVTHPVGVAEVNQLLQKAARGAFRGIVDYTELPLVSMDFNHDPHSAIVD 298
BLAST of CN192358 vs. ExPASy Swiss-Prot
Match: E4PD_VIBFM (D-erythrose-4-phosphate dehydrogenase OS=Vibrio fischeri (strain MJ11) GN=epd PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.607e-30 Identity = 75/225 (33.33%), Postives = 112/225 (49.78%), Query Frame = 1 Query: 55 IKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADA--PMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFD 723 +++ + D + +PW VD +++ +GV+ + A H+ GAKKV+ S P + GVN T P IVSN SCTTNC+ P+ K + + FGI G + D D R R ASQ+IIP T K + ++ P + K ++ RVPT NV+ +DL+ + D+ I AS +L I+ YT+ +VS DF D S+I D Sbjct: 79 VRILHQADLSLLPWQSLEVDLILDCTGVYGSKADGEKHINAGAKKVLFSHPGGSDLDNTIIYGVNHDTLLPEHRIVSNGSCTTNCIIPVIKAIDDAFGIDSGTITTIHSSMNDQQVIDAYH-SDLRRTRAASQSIIPVDTKLHKGIERIFPKFSNKFEAISVRVPTVNVTAMDLSVTINTNVKVNDINQTIVNASRCTLHNIVDYTEAPLVSIDFNHDPHSAIVD 302
BLAST of CN192358 vs. ExPASy Swiss-Prot
Match: E4PD_ERWCT (D-erythrose-4-phosphate dehydrogenase OS=Erwinia carotovora subsp. atroseptica GN=epd PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.607e-30 Identity = 76/226 (33.63%), Postives = 121/226 (53.54%), Query Frame = 1 Query: 55 IKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA---DAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFD 723 I++ + + ++PW + VD V++ SGV+ + AH+ GAKKV+ S P DA + V GVN + IVSNASCTTNC+ P+ K++ + FGI G + D D R R ASQ+IIP T + + ++ P + ++ RVPT NV+ +DL+ + K + ++ A ++ ++ S +GI+ YT+ +VS DF D S+I D Sbjct: 75 IRLLHQVEIQQLPWRELSVDIVLDCSGVYGSREDGEAHLAAGAKKVLFSHPGTTDLDATV-VFGVNHDRLESGHRIVSNASCTTNCIIPVIKLLDDAFGIENGTVTTIHSSMNDQPVIDAYH-HDLRRTRAASQSIIPVDTKLSAGITRIFPQFVDRFEAISVRVPTINVTAIDLSVSVRKAVNVNEINALLQKSAHESFRGIVDYTELPLVSADFNHDPHSAIVD 298
BLAST of CN192358 vs. ExPASy Swiss-Prot
Match: E4PD_VIBF1 (D-erythrose-4-phosphate dehydrogenase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=epd PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.472e-29 Identity = 75/225 (33.33%), Postives = 112/225 (49.78%), Query Frame = 1 Query: 55 IKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADA--PMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFD 723 +++ + D + +PW VD V++ +GV+ + + H+ GAKKV+ S P + GVN T P IVSN SCTTNC+ P+ K + + FGI G + D D R R ASQ+IIP T K + ++ P + K ++ RVPT NV+ +DL+ + D+ I AS +L I+ YT+ +VS DF D S+I D Sbjct: 79 VRILHQADLSLLPWQSLEVDLVLDCTGVYGSKSDGEKHITAGAKKVLFSHPGGSDLDNTIIYGVNHDTLLPEHRIVSNGSCTTNCIIPVIKAIDDAFGIDSGTITTIHSSMNDQQVIDAYH-SDLRRTRAASQSIIPVDTKLHKGIERIFPKFSNKFEAISVRVPTVNVTAMDLSVTINTNVKVNDINQTIVNASRCTLHNIVDYTEAPLVSIDFNHDPHSAIVD 302
BLAST of CN192358 vs. ExPASy Swiss-Prot
Match: E4PD_EDWI9 (D-erythrose-4-phosphate dehydrogenase OS=Edwardsiella ictaluri (strain 93-146) GN=epd PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.922e-29 Identity = 82/236 (34.75%), Postives = 120/236 (50.85%), Query Frame = 1 Query: 25 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA---DAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFD 723 D L I I++ + A++PW VD V+E SGV+ + A AH+ GA KV+ S P DA + V GVN+++ IVSNASCTTNC+ P+ K++ + F I G + D D R R AS +IIP T A + +VLP + ++ RVPT NV+ +DL+ + E V ++ A+ + GI+ YT+ +VS DF D S+I D Sbjct: 65 DDWLWIGDDRIRLLHRPQIADLPWEALQVDVVLECSGVYGSRADGEAHLLAGAGKVLFSHPGGHDLDATV-VYGVNQESLLAEHRIVSNASCTTNCIIPVIKLLDDAFAIESGAVTTIHSSMNDQQVIDAYH-PDLRRTRAASHSIIPVDTKLAAGIARVLPQFRDRFEAISVRVPTLNVTAIDLSVSVRTPVRVEQVNHLLQKAASTAFHGIVDYTELPLVSTDFNHDPHSAIVD 298
BLAST of CN192358 vs. ExPASy Swiss-Prot
Match: G3P_HELPY (Glyceraldehyde-3-phosphate dehydrogenase OS=Helicobacter pylori GN=gapA PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.511e-29 Identity = 81/210 (38.57%), Postives = 117/210 (55.71%), Query Frame = 1 Query: 106 GVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP------SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSI 717 GVD ++E SG F ++ GAKKV++SAP P V GVN Y+ N IVSNASCTTN +AP+ ++ + F I EG++ D D R R A+ NIIP++T AA A+ KVLP+L K+ G + RVP+ +VS++DL+ L K A + + + AS+G LKG+L ++ VS+DF+ + S I Sbjct: 85 GVDVIIECSGKFLEPKTLENYLLLGAKKVLLSAPFMGEYDEKQYPTLVYGVNHFCYQ-NQAIVSNASCTTNAIAPICAILDKAFKIKEGMLTTIHSYTSDQKLIDLAHPLDKRRSRAAASNIIPTTTKAALALHKVLPNLKNKMHGHSVRVPSLDVSMIDLSLFLEKKAPKDPINDLLIEASKGVLKGVLEIDLKERVSSDFISNPHSVI 293
BLAST of CN192358 vs. ExPASy Swiss-Prot
Match: G3P_HELPJ (Glyceraldehyde-3-phosphate dehydrogenase OS=Helicobacter pylori J99 GN=gapA PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.279e-29 Identity = 89/243 (36.63%), Postives = 130/243 (53.50%), Query Frame = 1 Query: 10 HHVVDDSTLEINGKLIKVFSKRDPAEIPWGDY-GVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP------SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPDLNGKLTGMAFRVPTPNVSVVDLTCRLAKGASYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSI 717 H +++ NGKLI + S P D GV ++E SG F ++ GAKKV++SAP P V GVN Y+ N IVSNASCTTN +AP+ ++ + F I EG++ D D R R A+ NIIP++T AA A+ KVLP+L K+ G + RVP+ +VS++DL+ L K A + + + AS+G+LKG+L ++ VS+DF+ + S I Sbjct: 53 HGLLNKEVRYSNGKLI-IGSLEIPVFNSIKDLKGVGVIIECSGKFLEPKTLENYLLLGAKKVLLSAPFMGEYDEKQYPTLVYGVNHFLYQ-NQAIVSNASCTTNAIAPICAILDKAFSIKEGMLTTIHSYTSDQKLIDLAHPLDKRRSRAAASNIIPTTTKAALALHKVLPNLKNKMHGHSVRVPSLDVSMIDLSLFLEKKALKDPINDLLITASKGTLKGVLEIDLKERVSSDFISNPNSVI 293 The following BLAST results are available for this feature:
BLAST of CN192358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 349
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Sequences
The
following sequences are available for this feature:
EST sequence >CN192358 ID=CN192358; Name=CN192358; organism=Citrus sinensis; type=EST; length=726bpback to top |