EY691903

Overview
NameEY691903
Unique NameEY691903
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY691903 vs. ExPASy Swiss-Prot
Match: UB2E3_HUMAN (Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.582e-25
Identity = 54/80 (67.50%), Postives = 65/80 (81.25%), Query Frame = 3
Query:    3 VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYA 242
            V FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV  IA  Y T+R++++  AR WT++YA
Sbjct:  127 VTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYA 206          
BLAST of EY691903 vs. ExPASy Swiss-Prot
Match: UB2E3_BOVIN (Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.582e-25
Identity = 54/80 (67.50%), Postives = 65/80 (81.25%), Query Frame = 3
Query:    3 VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYA 242
            V FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV  IA  Y T+R++++  AR WT++YA
Sbjct:  127 VTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYA 206          
BLAST of EY691903 vs. ExPASy Swiss-Prot
Match: UBCD2_DROME (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster GN=UbcD2 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.855e-24
Identity = 53/80 (66.25%), Postives = 63/80 (78.75%), Query Frame = 3
Query:    3 VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYA 242
            V FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV  IA  Y  +R +++  AR WT++YA
Sbjct:  152 VTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLQNREEHDRIARLWTKRYA 231          
BLAST of EY691903 vs. ExPASy Swiss-Prot
Match: UBE2N_MACFA (Ubiquitin-conjugating enzyme E2 N OS=Macaca fascicularis GN=UBE2N PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.326e-21
Identity = 46/81 (56.79%), Postives = 63/81 (77.78%), Query Frame = 3
Query:    3 VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAM 245
            V F TK++HPN++ +G ICLDILK++WSPAL I  VLLSI +LL+ PNPDDPL  ++A  +KT+ ++   TAR+WT+ YAM
Sbjct:   69 VRFMTKIYHPNVDKSGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 149          
BLAST of EY691903 vs. ExPASy Swiss-Prot
Match: UBE2N_PONAB (Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.859e-21
Identity = 46/81 (56.79%), Postives = 62/81 (76.54%), Query Frame = 3
Query:    3 VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAM 245
            V F TK++HPN++  G ICLDILK++WSPAL I  VLLSI +LL+ PNPDDPL  ++A  +KT+ ++   TAR+WT+ YAM
Sbjct:   69 VRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 149          
BLAST of EY691903 vs. ExPASy Swiss-Prot
Match: UBE2N_MOUSE (Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.859e-21
Identity = 46/81 (56.79%), Postives = 62/81 (76.54%), Query Frame = 3
Query:    3 VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAM 245
            V F TK++HPN++  G ICLDILK++WSPAL I  VLLSI +LL+ PNPDDPL  ++A  +KT+ ++   TAR+WT+ YAM
Sbjct:   69 VRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 149          
BLAST of EY691903 vs. ExPASy Swiss-Prot
Match: UBE2N_HUMAN (Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens GN=UBE2N PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.859e-21
Identity = 46/81 (56.79%), Postives = 62/81 (76.54%), Query Frame = 3
Query:    3 VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAM 245
            V F TK++HPN++  G ICLDILK++WSPAL I  VLLSI +LL+ PNPDDPL  ++A  +KT+ ++   TAR+WT+ YAM
Sbjct:   69 VRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 149          
BLAST of EY691903 vs. ExPASy Swiss-Prot
Match: UBE2N_BOVIN (Ubiquitin-conjugating enzyme E2 N OS=Bos taurus GN=UBE2N PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.859e-21
Identity = 46/81 (56.79%), Postives = 62/81 (76.54%), Query Frame = 3
Query:    3 VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAM 245
            V F TK++HPN++  G ICLDILK++WSPAL I  VLLSI +LL+ PNPDDPL  ++A  +KT+ ++   TAR+WT+ YAM
Sbjct:   69 VRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 149          
BLAST of EY691903 vs. ExPASy Swiss-Prot
Match: UBC31_ARATH (Probable ubiquitin carrier protein E2 31 OS=Arabidopsis thaliana GN=UBC31 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.859e-21
Identity = 43/78 (55.13%), Postives = 61/78 (78.21%), Query Frame = 3
Query:    9 FRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYA 242
            F+T ++HPNIN  GSIC++ILK++W+PAL + KVLLSI  LL  PNPDDPLVPEI  ++K +R +++  AR +T ++A
Sbjct:   75 FKTPIYHPNINDEGSICMNILKDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQRAREFTARHA 152          
BLAST of EY691903 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.123e-20
Identity = 45/81 (55.56%), Postives = 62/81 (76.54%), Query Frame = 3
Query:    3 VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAM 245
            V F TK++HPN++  G ICLDILK++WSPAL I  VLLSI +LL+ PNPDDPL  ++A  +K++ ++   TAR+WT+ YAM
Sbjct:   69 VRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKSNEAQAIETARAWTRLYAM 149          
The following BLAST results are available for this feature:
BLAST of EY691903 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
UB2E3_HUMAN2.582e-2567.50Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens... [more]
UB2E3_BOVIN2.582e-2567.50Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus G... [more]
UBCD2_DROME2.855e-2466.25Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophi... [more]
UBE2N_MACFA1.326e-2156.79Ubiquitin-conjugating enzyme E2 N OS=Macaca fascic... [more]
UBE2N_PONAB3.859e-2156.79Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii ... [more]
UBE2N_MOUSE3.859e-2156.79Ubiquitin-conjugating enzyme E2 N OS=Mus musculus ... [more]
UBE2N_HUMAN3.859e-2156.79Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens ... [more]
UBE2N_BOVIN3.859e-2156.79Ubiquitin-conjugating enzyme E2 N OS=Bos taurus GN... [more]
UBC31_ARATH3.859e-2155.13Probable ubiquitin carrier protein E2 31 OS=Arabid... [more]
UBE2N_RAT1.123e-2055.56Ubiquitin-conjugating enzyme E2 N OS=Rattus norveg... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-102-A06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691903 ID=EY691903; Name=EY691903; organism=Citrus sinensis; type=EST; length=598bp
AGGTTGCATTCAGAACAAAAGTCTTCCATCCTAACATCAATAGCAACGGT
AGCATTTGCCTTGATATATTAAAAGAACAGTGGAGCCCTGCCCTTACCAT
ATCAAAGGTGCTGCTTTCTATTTGTTCACTGTTAACGGACCCGAACCCTG
ATGATCCATTGGTGCCAGAGATTGCCCACATGTACAAGACTGACCGGAGC
AAGTATGAAACAACTGCGAGGAGCTGGACCCAGAAGTATGCAATGGGTTA
GGTCACTGCTATCTCTCTGTCTCAAGGGAGGGCTTTCCCCAGGGCTTTGG
TCTTTAAAACTATTTATGTATGAACAAGAAGTGTGAGATGTCTCCTCATA
CAAGTGGTACCAGAGGGGAAGAATTATAATTAAGGCCTAGAAACAACAAC
ATTCACTGCTTTTAATTGTTTGTATGCAAATTTATCTTTTCATGCTTGGA
CGGTCTCTATTGTCATTAGCATCACCCTCTTAGCTGGTTTCTAACGAACC
CTGGGCCGTGATGTTTTTACTGTTTTGAGTGATCTTAGTTCTTACCTGAA
TTAAATTGTCACCATCTCTTGCCACTGAAAAAAAAAAAAAAAAAGGGG
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