CN192265

Overview
NameCN192265
Unique NameCN192265
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length642
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192265 vs. ExPASy Swiss-Prot
Match: CATJ_MOUSE (Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.927e-12
Identity = 41/123 (33.33%), Postives = 63/123 (51.22%), Query Frame = -1
Query:  286 CKFDKSKIAAAVSNFSVISSEEDQMAANLVKHGPLAVGINAVW--MQTYFGGVSCPYICGKY-LDHGGLIVGYGSSGFAPIRFKGKPYWIIKNSWGENWGENGYYKICMG-RNVCGVDSRVSF 642
            C++     +A ++++  +   E  +   +   GP++  I+A     + Y GG+     C  Y ++H  L+VGYGS G       G  YW+IKNSWGE WG NGY +I     N CG+ S  S+
Sbjct:  211 CRYRSENASANITDYVNLPPNELYLWVAVASIGPVSAAIDASHDSFRFYNGGIYYEPNCSSYFVNHAVLVVGYGSEGDVK---DGNNYWLIKNSWGEEWGMNGYMQIAKDHNNHCGIASLASY 330          
BLAST of CN192265 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 3.823e-12
Identity = 41/118 (34.75%), Postives = 62/118 (52.54%), Query Frame = -1
Query:  304 CKFDKSKIAAAVSNFSVISSEEDQMAANLVKH-GPLAVGINAVW--MQTYFGGVSCPYICGK-YLDHGGLIVGYGSSGFAPIRFKGKPYWIIKNSWGENWGENGYYKICMGR-NVCGV 642
            C+F+ + I A  + +  I+   +       +  GP++V I+A     Q+Y+ GV     C    LDH  L VGYGS G       G+ +W++KNSW  +WGE+GY K+   R N CG+
Sbjct:  203 CRFNSNTIGATCTGYVGIAQGSESALKTATRDIGPISVAIDASHRSFQSYYTGVYYEPSCSSSQLDHAVLAVGYGSEG-------GQDFWLVKNSWATSWGESGYIKMARNRNNNCGI 313          
BLAST of CN192265 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 3.823e-12
Identity = 44/123 (35.77%), Postives = 62/123 (50.41%), Query Frame = -1
Query:  286 CKFDKSKIAAAVSNFSVISSEEDQMAANLVKHGPLAVGINAVW--MQTYFGGVSC-PYICGKYLDHGGLIVGYGSSGFAPIRFKGKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSRVSF 642
            CK+      A  + F  I  +E  +   +   GP++V ++A    +Q Y  G+   P    K LDHG L+VGYG  G    + K   YW++KNSWG  WG  GY KI   R N CG+ +  S+
Sbjct:  211 CKYRAEFAVANDTGFVDIPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNK---YWLVKNSWGSEWGMEGYIKIAKDRDNHCGLATAASY 330          
BLAST of CN192265 vs. ExPASy Swiss-Prot
Match: CATL1_FELCA (Cathepsin L1 (Fragment) OS=Felis catus GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.823e-12
Identity = 40/111 (36.04%), Postives = 60/111 (54.05%), Query Frame = -1
Query:  319 CKFDKSKIAAAVSNFSVISSEEDQMAANLVKHGPLAVGINAVW--MQTYFGGVSCPYICGKY-LDHGGLIVGYGSSGFAPIRFKGKPYWIIKNSWGENWGENGYYKICMGR 642
            CK+      A V+++  I S+E+++   L   GP++  I+A     + Y  G+     C    +DHG L+VGYG+ G      + K YWIIKNSWG +WG +GY K+   R
Sbjct:   32 CKYRPENSVANVTDYWDIPSKENELMITLAAVGPISAAIDASLDTFRFYKEGIYYDPSCSSEDVDHGVLVVGYGADG---TETENKKYWIIKNSWGTDWGMDGYIKMAKDR 139          
BLAST of CN192265 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.993e-12
Identity = 45/129 (34.88%), Postives = 66/129 (51.16%), Query Frame = -1
Query:  286 CKFDKSKIAAAVS--NFSVISSEEDQMAANLVKHGPLAVGINAVWM--QTYFGGVSCPYICGKYLDHGGLIVGYGSSGFAPIRFKGKPYWIIKNSWGENWGENGYYKICMGRNV------CGVDSRVSF 642
            C  DK+     V+   +  +  ++++     V H P++V I A     Q Y  GV     CG  LDHG ++VGYGS+        G+ YWII+NSWG NWG++GY K  + RN+      CG+    S+
Sbjct:  228 CNADKNNNTRVVTIDGYEDVPRDDEKSLKKAVAHQPVSVAIEASSQAFQLYKSGVMTG-TCGISLDHGVVVVGYGSTS-------GEDYWIIRNSWGLNWGDSGYVK--LQRNIDDPFGKCGIAMMPSY 346          
BLAST of CN192265 vs. ExPASy Swiss-Prot
Match: CATC_RAT (Dipeptidyl-peptidase 1 OS=Rattus norvegicus GN=Ctsc PE=1 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 4.993e-12
Identity = 39/101 (38.61%), Postives = 58/101 (57.43%), Query Frame = -1
Query:  298 EDQMAANLVKHGPLAVG--INAVWMQTYFG-----GVSCPYICGKYLDHGGLIVGYGSSGFAPIRFKGKPYWIIKNSWGENWGENGYYKICMGRNVCGVDS 579
            E  M   LVKHGP+AV   ++  ++  + G     G+S P+   +  +H  L+VGYG     P+   G  YWI+KNSWG  WGE+GY++I  G + C ++S
Sbjct:  356 EALMKLELVKHGPMAVAFEVHDDFLHYHSGIYHHTGLSDPFNPFELTNHAVLLVGYGKD---PVT--GLDYWIVKNSWGSQWGESGYFRIRRGTDECAIES 451          
BLAST of CN192265 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 6.521e-12
Identity = 40/117 (34.19%), Postives = 60/117 (51.28%), Query Frame = -1
Query:  304 CKFDKSKIAAAVSNFSVISSEEDQMAANLVKHGPLAVGINAVW--MQTYFGGVSCPYICGK-YLDHGGLIVGYGSSGFAPIRFKGKPYWIIKNSWGENWGENGYYKICMG-RNVCGV 642
            C++     AA V +F  I   E+ +   + K GP++V ++A     Q Y  G+     C + +L+H  L+VGYG  G       G  +W++KNSWGE WG  GY K+     N CG+
Sbjct:  211 CRYHAENSAANVRDFVQIPGSEEALMKAVAKVGPISVAVDASHGSFQFYGSGIYYEPQCKRVHLNHAVLVVGYGFEGEES---DGNSFWLVKNSWGEEWGMKGYMKLAKDWSNHCGI 324          
BLAST of CN192265 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.521e-12
Identity = 40/125 (32.00%), Postives = 63/125 (50.40%), Query Frame = -1
Query:  286 CKFDKSKIAAAVSNFSVIS-SEEDQMAANLVKHGPLAVGINA-----VWMQTYFGGVSCPYICGKYLDHGGLIVGYGSSGFAPIRFKGKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSRVSF 642
            CKF   K  A V + + I+ ++E+ M   +  + P++          ++ +  +   SC     K ++H  L VGYG          G PYWI+KNSWG  WG NGY+ I  G+N+CG+ +  S+
Sbjct:  214 CKFQPDKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHKTPDK-VNHAVLAVGYGEEN-------GIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330          
BLAST of CN192265 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.521e-12
Identity = 40/110 (36.36%), Postives = 60/110 (54.55%), Query Frame = -1
Query:  286 NFSVISSEEDQMAANLVKHGPLAVGINAV-WMQTYFGGVSCPYICGKYLD---HGGLIVGYGSSGFAPIRFKGKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSRVSF 603
            N ++ + +E + A  LV+  P++V    +   + Y  GV     CG   D   H  L VGYG          G PYW+IKNSWG +WG+NGY+K+ MG+N+C + +  S+
Sbjct:  257 NITLNAEDELKNAVGLVR--PVSVAFQVIDGFRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVEN-------GVPYWLIKNSWGADWGDNGYFKMEMGKNMCAIATCASY 357          
BLAST of CN192265 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 8.516e-12
Identity = 40/115 (34.78%), Postives = 57/115 (49.57%), Query Frame = -1
Query:  286 AVSNFSVISSEEDQMAANLVKHGPLAVGINAVW--MQTYFGGVSCPYICGKYLDHGGLIVGYGSSGFAPIRFKGKPYWIIKNSWGENWGENGYYKICMGRNV----CGVDSRVSF 612
            ++  F  +   +++     V H P++V I A     Q Y  GV     CG  LDHG + VGYG+         GK YWI++NSWG  WGE+GY ++    NV    CG+    S+
Sbjct:  249 SIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFSGR-CGTSLDHGVVAVGYGTDN-------GKDYWIVRNSWGPKWGESGYVRMERNINVTTGKCGIAMMASY 355          
The following BLAST results are available for this feature:
BLAST of CN192265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
CATJ_MOUSE2.927e-1233.33Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2[more]
CYSP1_HOMAM3.823e-1234.75Digestive cysteine proteinase 1 OS=Homarus america... [more]
CATL1_MOUSE3.823e-1235.77Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
CATL1_FELCA3.823e-1236.04Cathepsin L1 (Fragment) OS=Felis catus GN=CTSL1 PE... [more]
CPR1_ARATH4.993e-1234.88Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
CATC_RAT4.993e-1238.61Dipeptidyl-peptidase 1 OS=Rattus norvegicus GN=Cts... [more]
TEST2_RAT6.521e-1234.19Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]
CATH_PIG6.521e-1232.00Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
ALEU_HORVU6.521e-1236.36Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
ORYB_ORYSJ8.516e-1234.78Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006J19_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006J19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192265 ID=CN192265; Name=CN192265; organism=Citrus sinensis; type=EST; length=642bp
TTTTTTTTTTTTTTTTTCCAAAAAAAAAAAATATTAATACCCTCTTCAAT
AACAATTCCGTAGCAGGGGTAACTATAAAATAAATAAATATTACCTTCTG
ACATGACATATGCTTAAATATTACAAGAGCATAAAAAGTTCATGCCCCCC
CCCAGGCATGTAGGCATCGTTATAATTGCAAACGGATTTTTAAAAGGATA
TCCTATAATATCTAGGTACAAAAGCTCCCCTTGCCTAGCACAACCTCCAT
AATGTCTAGCTTGAGGTTGTATGGATAGCACCTACAAATGAAACCCTGGA
GTCCACCCCACAAACATTGCGACCCATGCAAATTTTATAATATCCATTCT
CTCCCCAGTTCTCTCCCCAGGAGTTCTTTATGATCCAGTAAGGCTTCCCC
TTGAATCTGATCGGGGCGAAACCTGAGGATCCATAGCCCACGATAAGCCC
TCCATGATCCAAATACTTCCCGCAAATGTATGGGCATGAAACCCCCCCAA
AATATGTTTGCATCCAAACGGCATTGATACCCACTGCCAAAGGGCCATGT
TTCACCAAATTTGCAGCCATTTGATCTTCCTCAGAAGAAATAACACTGAA
ATTAGATACAGCTGCCGCAATTTTGCTTTTGTCAAATTTGCA
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