CN192265

Overview
NameCN192265
Unique NameCN192265
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length642
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192265 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.478e-11
Identity = 39/123 (31.71%), Postives = 62/123 (50.41%), Query Frame = -1
Query:  286 KSKIAAAVSNFSVISSEEDQMAANLVKHGPLAVGINAVW--MQTYFGGVSCPYICGKYLDHGGLIVGYGSSGFAPIRFKGKPYWIIKNSWGENWGENGYYKICMGRNV------CGVDSRVSF 630
            K+     + ++  + +  ++     V H P+++ I A     Q Y  G+     CG  LDHG + VGYG+         GK YWI++NSWG++WGE+GY +  M RN+      CG+    S+
Sbjct:  238 KNAKVVTIDSYEDVPTYSEESLKKAVAHQPISIAIEAGGRAFQLYDSGIF-DGSCGTQLDHGVVAVGYGTEN-------GKDYWIVRNSWGKSWGESGYLR--MARNIASSSGKCGIAIEPSY 350          
BLAST of CN192265 vs. ExPASy Swiss-Prot
Match: CYSP2_DICDI (Cysteine proteinase 2 OS=Dictyostelium discoideum GN=cprB PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.478e-11
Identity = 48/153 (31.37%), Postives = 66/153 (43.14%), Query Frame = -1
Query:  286 CKFDKSKIAAAVSNFSVISSEEDQMAANLVKHGPLAVGINAVW--MQTYFGGVSCPYICG-KYLDHGGLIVGYGSSG------------------------------FAPIRFKGKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSRVSF 642
            C F+KS I A +  +  I++  +    N  +HGP++V I+A     Q Y  G+     C    LDHG L+VGYG  G                                 +R K   YWI+KNSWG +WG  GY  +   R N CG+ S  S+
Sbjct:  221 CLFNKSDIGATIKGYVNITAGSEISLENGAQHGPVSVAIDASHNSFQLYTSGIYYEPKCSPTELDHGVLVVGYGVQGKDDEGPVLNRKQTIVIHKNEDNKVESSDDSSDSVRPKANNYWIVKNSWGTSWGIKGYILMSKDRKNNCGIASVSSY 373          
BLAST of CN192265 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.478e-11
Identity = 43/123 (34.96%), Postives = 60/123 (48.78%), Query Frame = -1
Query:  286 KSKIAAAVSNFSVISSEEDQMAANLVKHGPLAVGINAVW--MQTYFGGVSCPYICGKYLDHGGLIVGYGSSGFAPIRFKGKPYWIIKNSWGENWGENGYYKICMGRNV------CGVDSRVSF 630
            +S+   ++  F  +   ++      V H P++V I+A     Q Y  GV     CG  LDHG + VGYG+         G  YW ++NSWG +WGENGY  I M RNV      CG+    S+
Sbjct:  258 RSRKVVSIDGFEDVPENDELSLQKAVAHQPVSVAIDAGGREFQLYDSGVFTGR-CGTNLDHGVVAVGYGTDAAT-----GAAYWTVRNSWGPDWGENGY--IRMERNVTARTGKCGIAMMASY 372          
BLAST of CN192265 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.236e-11
Identity = 46/128 (35.94%), Postives = 62/128 (48.44%), Query Frame = -1
Query:  286 CKFDKSKIA-AAVSNFSVISSEEDQMAANLVKHGPLAVGINAVW--MQTYFGGVSCPYICGKYLDHGGLIVGYGSSGFAPIRFKGKPYWIIKNSWGENWGENGYYKICMGRN------VCGVDSRVSF 642
            C+  K  +    +S +  +   +D+     + H P++V I A     Q Y GGV     CG  LDHG   VGYGSS       KG  Y I+KNSWG  WGE G+  I M RN      +CG++   S+
Sbjct:  233 CQEQKEDVERVTISGYEDVPENDDESLVKALAHQPVSVAIEASGRDFQFYKGGVFNGK-CGTDLDHGVAAVGYGSS-------KGSDYVIVKNSWGPRWGEKGF--IRMKRNTGKPEGLCGINKMASY 350          
BLAST of CN192265 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.236e-11
Identity = 44/135 (32.59%), Postives = 66/135 (48.89%), Query Frame = -1
Query:  286 CKFDKSKIAAAVSNFSVISSEEDQMAANLVKHGPLAVGINAVWM--QTYFGGVSC-PYICGKYLDHGGLIVGYGS-SGFAPIRFKGKP-----------YWIIKNSWGENWGENGYYKICMGR-NVCGVDSRVSF 642
            C++      A +S++  +++  +    + V   P++V I+A     Q Y  G+   P    + LDHG L VGYGS SG +  +  G+            YWI+KNSWG +WG  GY  +   R N CG+ S  SF
Sbjct:  207 CEYKSENSGATLSSYKTVTAGSESSLESAVNVNPVSVAIDASHQSFQLYTSGIYYEPECSSENLDHGVLAVGYGSGSGSSSGQSSGQSSGNLSASSSNEYWIVKNSWGTSWGIEGYILMSRNRDNNCGIASSASF 341          
BLAST of CN192265 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.236e-11
Identity = 44/123 (35.77%), Postives = 60/123 (48.78%), Query Frame = -1
Query:  286 CKFDKSKIAAAVSNFSVISSEEDQMAANLVKHGPLAVGINA--VWMQTYFGGVSCPYICG-KYLDHGGLIVGYGSSGFAPIRFKGKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSRVSF 642
            C +     AA  + F  I   E  +   +   GP++V I+A     Q Y  G+     C  K LDHG L+VGYG  G      K   +WI+KNSWG  WG NGY K+   + N CG+ +  S+
Sbjct:  212 CNYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNNNK---FWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAASY 331          
BLAST of CN192265 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 3.236e-11
Identity = 44/123 (35.77%), Postives = 60/123 (48.78%), Query Frame = -1
Query:  286 CKFDKSKIAAAVSNFSVISSEEDQMAANLVKHGPLAVGINA--VWMQTYFGGVSCPYICG-KYLDHGGLIVGYGSSGFAPIRFKGKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSRVSF 642
            C +     AA  + F  I   E  +   +   GP++V I+A     Q Y  G+     C  K LDHG L+VGYG  G      K   +WI+KNSWG  WG NGY K+   + N CG+ +  S+
Sbjct:  212 CNYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNNNK---FWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAASY 331          
BLAST of CN192265 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 68.5514 bits (166), Expect = 3.236e-11
Identity = 41/124 (33.06%), Postives = 58/124 (46.77%), Query Frame = -1
Query:  286 CKFDKSKIAAAVSNFSVISS-EEDQMAANLVKHGPLAVGINAVW-MQTYFGGVSCPYICGKYLD---HGGLIVGYGSSGFAPIRFKGKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSRVSF 642
            CKF   K    V + + I+  +E+ M   +  + P++           Y  G+     C K  D   H  L VGYG          G PYWI+KNSWG  WG NGY+ I  G+N+CG+ +  S+
Sbjct:  214 CKFQPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKN-------GIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330          
BLAST of CN192265 vs. ExPASy Swiss-Prot
Match: CATC_CANFA (Dipeptidyl-peptidase 1 (Fragment) OS=Canis familiaris GN=CTSC PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.236e-11
Identity = 36/101 (35.64%), Postives = 54/101 (53.47%), Query Frame = -1
Query:  298 EDQMAANLVKHGPLAVGINAV-----WMQT--YFGGVSCPYICGKYLDHGGLIVGYGSSGFAPIRFKGKPYWIIKNSWGENWGENGYYKICMGRNVCGVDS 579
            E  M   LV+HGP+AV          + +   Y  G+  P+   +  +H  L+VGYG+   +     G  YWI+KNSWG  WGE+GY++I  G + C ++S
Sbjct:  329 EALMKLELVRHGPMAVAFEVYDDFFHYQKGIYYHTGLRDPFNPFELTNHAVLLVGYGTDSAS-----GMDYWIVKNSWGSRWGEDGYFRIRRGTDECAIES 424          
BLAST of CN192265 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.227e-11
Identity = 43/126 (34.13%), Postives = 61/126 (48.41%), Query Frame = -1
Query:  286 CKFDKSKI-AAAVSNFSVISSEEDQMAANLVKHGPLAVGINAVW--MQTYFGGVSCPYICGKYLDHGGLIVGYGSSGFAPIRFKGKPYWIIKNSWGENWGENGYYKICMG----RNVCGVDSRVSF 642
            C+  K +     ++    + + +++     + H PL+V I+A     Q Y GGV     CG  LDHG   VGYGSS       KG  Y I+KNSWG  WGE GY ++         +CG++   SF
Sbjct:  234 CEMQKDESETVTINGHQDVPTNDEKSLLKALAHQPLSVAIDASGREFQFYSGGVFDGR-CGVDLDHGVAAVGYGSS-------KGSDYIIVKNSWGPKWGEKGYIRLKRNTGKPEGLCGINKMASF 351          
The following BLAST results are available for this feature:
BLAST of CN192265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
RD21A_ARATH2.478e-1131.71Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
CYSP2_DICDI2.478e-1131.37Cysteine proteinase 2 OS=Dictyostelium discoideum ... [more]
CYSP1_ORYSJ2.478e-1134.96Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
XCP1_ARATH3.236e-1135.94Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]
CYSP5_DICDI3.236e-1132.59Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]
CATL2_BOVIN3.236e-1135.77Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
CATL1_BOVIN3.236e-1135.77Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]
CATH_HUMAN3.236e-1133.06Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]
CATC_CANFA3.236e-1135.64Dipeptidyl-peptidase 1 (Fragment) OS=Canis familia... [more]
XCP2_ARATH4.227e-1134.13Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006J19_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006J19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192265 ID=CN192265; Name=CN192265; organism=Citrus sinensis; type=EST; length=642bp
TTTTTTTTTTTTTTTTTCCAAAAAAAAAAAATATTAATACCCTCTTCAAT
AACAATTCCGTAGCAGGGGTAACTATAAAATAAATAAATATTACCTTCTG
ACATGACATATGCTTAAATATTACAAGAGCATAAAAAGTTCATGCCCCCC
CCCAGGCATGTAGGCATCGTTATAATTGCAAACGGATTTTTAAAAGGATA
TCCTATAATATCTAGGTACAAAAGCTCCCCTTGCCTAGCACAACCTCCAT
AATGTCTAGCTTGAGGTTGTATGGATAGCACCTACAAATGAAACCCTGGA
GTCCACCCCACAAACATTGCGACCCATGCAAATTTTATAATATCCATTCT
CTCCCCAGTTCTCTCCCCAGGAGTTCTTTATGATCCAGTAAGGCTTCCCC
TTGAATCTGATCGGGGCGAAACCTGAGGATCCATAGCCCACGATAAGCCC
TCCATGATCCAAATACTTCCCGCAAATGTATGGGCATGAAACCCCCCCAA
AATATGTTTGCATCCAAACGGCATTGATACCCACTGCCAAAGGGCCATGT
TTCACCAAATTTGCAGCCATTTGATCTTCCTCAGAAGAAATAACACTGAA
ATTAGATACAGCTGCCGCAATTTTGCTTTTGTCAAATTTGCA
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