CN192246

Overview
NameCN192246
Unique NameCN192246
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length463
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192246 vs. ExPASy Swiss-Prot
Match: CATA2_ORYSJ (Catalase isozyme B OS=Oryza sativa subsp. japonica GN=CATB PE=2 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 6.794e-73
Identity = 125/152 (82.24%), Postives = 139/152 (91.45%), Query Frame = 3
Query:    6 FDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLGVNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKM 461
            FDDVGIP +YRHMEGFGV T+TL+NK+GK H VKFHWKPTCGVKCL+DDE AV VGG+ HSHAT+DL DSIAAGNYPEWKLYIQTIDPDHED+FDFDPLDVTK WPEDIIPLQPVGR+ +NKNIDNFFAENE LAF P I+VPGI+YS+DK+
Sbjct:  190 FDDVGIPLNYRHMEGFGVNTYTLINKDGKPHLVKFHWKPTCGVKCLLDDE-AVTVGGTCHSHATKDLTDSIAAGNYPEWKLYIQTIDPDHEDRFDFDPLDVTKTWPEDIIPLQPVGRMVLNKNIDNFFAENEQLAFCPAIIVPGIHYSDDKL 340          
BLAST of CN192246 vs. ExPASy Swiss-Prot
Match: CATA2_ORYSI (Catalase isozyme B OS=Oryza sativa subsp. indica GN=CATB PE=2 SV=2)

HSP 1 Score: 272.322 bits (695), Expect = 6.794e-73
Identity = 125/152 (82.24%), Postives = 139/152 (91.45%), Query Frame = 3
Query:    6 FDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLGVNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKM 461
            FDDVGIP +YRHMEGFGV T+TL+NK+GK H VKFHWKPTCGVKCL+DDE AV VGG+ HSHAT+DL DSIAAGNYPEWKLYIQTIDPDHED+FDFDPLDVTK WPEDIIPLQPVGR+ +NKNIDNFFAENE LAF P I+VPGI+YS+DK+
Sbjct:  190 FDDVGIPLNYRHMEGFGVNTYTLINKDGKPHLVKFHWKPTCGVKCLLDDE-AVTVGGTCHSHATKDLTDSIAAGNYPEWKLYIQTIDPDHEDRFDFDPLDVTKTWPEDIIPLQPVGRMVLNKNIDNFFAENEQLAFCPAIIVPGIHYSDDKL 340          
BLAST of CN192246 vs. ExPASy Swiss-Prot
Match: CATA_HELAN (Catalase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 1.159e-72
Identity = 121/151 (80.13%), Postives = 138/151 (91.39%), Query Frame = 3
Query:    9 DDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLGVNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKM 461
            DD+G+PQDYRHM+G GV T+TL+NK GK +YVKFHWKPTCGVK L++ EEA+K+GG+NHSHATQDLYDSIAAGNYPEWKL+IQTIDPDHED+ DFDPLDVTK WPEDI PLQPVGRL +NKNIDNFFAENE LAF P I+VPGIYYS+DK+
Sbjct:  191 DDIGVPQDYRHMDGSGVNTYTLINKAGKAYYVKFHWKPTCGVKSLLE-EEAIKIGGANHSHATQDLYDSIAAGNYPEWKLFIQTIDPDHEDRLDFDPLDVTKTWPEDIFPLQPVGRLVLNKNIDNFFAENEQLAFCPAIIVPGIYYSDDKL 340          
BLAST of CN192246 vs. ExPASy Swiss-Prot
Match: CATA_AVIMR (Catalase OS=Avicennia marina PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 1.159e-72
Identity = 122/152 (80.26%), Postives = 140/152 (92.11%), Query Frame = 3
Query:    6 FDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLGVNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKM 461
            +DDVGIPQDYRHMEGFGV ++TL+NK GKV+YVKFHWKPTCGVKCL++DE AV++GG+NHSHATQDLYDSIAAGNYPEWKLY Q +DPD ED+FDFDPLD TK WPEDIIPL PVGR+ +NKNIDNFFAENEMLAF+P ++VPGI +SNDKM
Sbjct:  190 YDDVGIPQDYRHMEGFGVHSYTLINKAGKVNYVKFHWKPTCGVKCLMEDE-AVRIGGTNHSHATQDLYDSIAAGNYPEWKLYFQIMDPDQEDRFDFDPLDTTKIWPEDIIPLIPVGRMVLNKNIDNFFAENEMLAFSPHMIVPGINFSNDKM 340          
BLAST of CN192246 vs. ExPASy Swiss-Prot
Match: CATA1_NICPL (Catalase isozyme 1 (Fragment) OS=Nicotiana plumbaginifolia GN=CAT1 PE=2 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 5.751e-72
Identity = 123/152 (80.92%), Postives = 137/152 (90.13%), Query Frame = 3
Query:    6 FDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLGVNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKM 461
            FDD+GIPQDYRHM+G GV TFTL+NK GK  YVKFHWKPTCGVK L++DE A +VGG+NHSHATQDLYDSIAAGNYPEWKL+IQT+DPDHED+FDFDPLDVTK WPEDI+PLQPVGRL +NKNIDNF  ENE LAF P IVVPG+YYS+DKM
Sbjct:  183 FDDIGIPQDYRHMDGSGVHTFTLINKAGKSTYVKFHWKPTCGVKSLLEDE-AARVGGANHSHATQDLYDSIAAGNYPEWKLFIQTMDPDHEDRFDFDPLDVTKTWPEDILPLQPVGRLVLNKNIDNFSNENEQLAFCPSIVVPGVYYSDDKM 333          
BLAST of CN192246 vs. ExPASy Swiss-Prot
Match: CATA2_RICCO (Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=2 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 9.810e-72
Identity = 122/152 (80.26%), Postives = 137/152 (90.13%), Query Frame = 3
Query:    6 FDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLGVNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKM 461
            FDDVGIPQDYRHMEGFGV T+ L+NK GKV YVKFHWKPTCGVKCL+DDE A+KVGG+NHSHATQDLYDSIAAGN+PEWKL IQT+DP  ED+F FDPLD+TK WPED+ PL PVGRL +N+NIDN+FAENEMLAFNP  VVPG+YYSNDK+
Sbjct:  190 FDDVGIPQDYRHMEGFGVHTYCLINKAGKVTYVKFHWKPTCGVKCLMDDE-AIKVGGANHSHATQDLYDSIAAGNFPEWKLMIQTMDPADEDKFSFDPLDMTKIWPEDMFPLHPVGRLVLNRNIDNWFAENEMLAFNPAHVVPGVYYSNDKL 340          
BLAST of CN192246 vs. ExPASy Swiss-Prot
Match: CATA2_GOSHI (Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 2.185e-71
Identity = 118/152 (77.63%), Postives = 138/152 (90.79%), Query Frame = 3
Query:    6 FDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLGVNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKM 461
            FDD+G+PQDYRHM+G GV T+TL+NK GK HYVKFHWKPTCGVK L++DE A++VGG+NHSHATQDLYDSIAAGNYPEWKL+IQ +DP HED+FDFDPLDVTK WPEDI PLQP+GR+ +NKNIDNFFAENE LAF P ++VPGIYYS+DK+
Sbjct:  190 FDDIGVPQDYRHMDGSGVHTYTLINKAGKSHYVKFHWKPTCGVKSLLEDE-AIRVGGANHSHATQDLYDSIAAGNYPEWKLFIQIMDPLHEDRFDFDPLDVTKTWPEDIFPLQPMGRMVLNKNIDNFFAENEQLAFCPSLIVPGIYYSDDKL 340          
BLAST of CN192246 vs. ExPASy Swiss-Prot
Match: CATA1_SOYBN (Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 1.417e-70
Identity = 119/152 (78.29%), Postives = 137/152 (90.13%), Query Frame = 3
Query:    6 FDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLGVNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKM 461
            FDDVGIPQDYRHM+GFGV T+TL+NK GK  YVKFHWK T G K L+DDE A++VGGSNHSHATQDLYDSIAAGNYPEWKLYIQT+DP++ED+ DFDPLDVTK WPED++PLQPVGR+ +NKNIDNFFAENE LAF P I+VPG+YYS+DK+
Sbjct:  190 FDDVGIPQDYRHMDGFGVNTYTLINKAGKALYVKFHWKTTSGEKSLLDDE-AIRVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTLDPENEDRLDFDPLDVTKTWPEDVLPLQPVGRMVLNKNIDNFFAENEQLAFCPAIIVPGVYYSDDKL 340          
BLAST of CN192246 vs. ExPASy Swiss-Prot
Match: CATA1_ARATH (Catalase-1 OS=Arabidopsis thaliana GN=CAT1 PE=1 SV=3)

HSP 1 Score: 264.233 bits (674), Expect = 1.850e-70
Identity = 116/152 (76.32%), Postives = 136/152 (89.47%), Query Frame = 3
Query:    6 FDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLGVNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKM 461
            FDD+GIPQDYRHMEG GV T+ L+NK GK HYVKFHWKPTCG+KCL  DEEA++VGG+NHSHAT+DLYDSIAAGNYP+W L++Q +DP HED+FDFDPLDVTK WPEDI+PLQPVGRL +NKNIDNFF ENE +AF P +VVPGI+YS+DK+
Sbjct:  190 FDDLGIPQDYRHMEGAGVNTYMLINKAGKAHYVKFHWKPTCGIKCL-SDEEAIRVGGANHSHATKDLYDSIAAGNYPQWNLFVQVMDPAHEDKFDFDPLDVTKIWPEDILPLQPVGRLVLNKNIDNFFNENEQIAFCPALVVPGIHYSDDKL 340          
BLAST of CN192246 vs. ExPASy Swiss-Prot
Match: CATA2_ARATH (Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV=3)

HSP 1 Score: 263.848 bits (673), Expect = 2.416e-70
Identity = 118/152 (77.63%), Postives = 137/152 (90.13%), Query Frame = 3
Query:    6 FDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLGVNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKM 461
            FDD+GIPQDYRHM+G GV T+ L+NK GK HYVKFHWKPTCGVK L++ E+A++VGG+NHSHATQDLYDSIAAGNYPEWKL+IQ IDP  ED+FDFDPLDVTK WPEDI+PLQPVGR+ +NKNIDNFFAENE LAF P I+VPGI+YS+DK+
Sbjct:  190 FDDIGIPQDYRHMDGSGVNTYMLINKAGKAHYVKFHWKPTCGVKSLLE-EDAIRVGGTNHSHATQDLYDSIAAGNYPEWKLFIQIIDPADEDKFDFDPLDVTKTWPEDILPLQPVGRMVLNKNIDNFFAENEQLAFCPAIIVPGIHYSDDKL 340          
The following BLAST results are available for this feature:
BLAST of CN192246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CATA2_ORYSJ6.794e-7382.24Catalase isozyme B OS=Oryza sativa subsp. japonica... [more]
CATA2_ORYSI6.794e-7382.24Catalase isozyme B OS=Oryza sativa subsp. indica G... [more]
CATA_HELAN1.159e-7280.13Catalase OS=Helianthus annuus PE=2 SV=1[more]
CATA_AVIMR1.159e-7280.26Catalase OS=Avicennia marina PE=2 SV=1[more]
CATA1_NICPL5.751e-7280.92Catalase isozyme 1 (Fragment) OS=Nicotiana plumbag... [more]
CATA2_RICCO9.810e-7280.26Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=... [more]
CATA2_GOSHI2.185e-7177.63Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 P... [more]
CATA1_SOYBN1.417e-7078.29Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1[more]
CATA1_ARATH1.850e-7076.32Catalase-1 OS=Arabidopsis thaliana GN=CAT1 PE=1 SV... [more]
CATA2_ARATH2.416e-7077.63Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006J09_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006J09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192246 ID=CN192246; Name=CN192246; organism=Citrus sinensis; type=EST; length=463bp
GAGGCTTTGATGATGTGGGTATTCCACAAGATTACAGGCACATGGAAGGC
TTCGGTGTTCAAACTTTTACACTGGTCAATAAGAATGGGAAAGTGCACTA
TGTGAAATTCCACTGGAAACCAACTTGTGGAGTTAAGTGTTTGATAGATG
ATGAAGAAGCAGTAAAGGTTGGTGGATCTAATCACAGCCACGCTACTCAG
GATCTCTACGACTCAATTGCAGCTGGAAACTATCCTGAGTGGAAACTCTA
CATTCAGACTATTGATCCCGATCACGAGGACCAATTTGACTTTGACCCAC
TGGACGTAACCAAGTGGTGGCCTGAGGACATCATCCCTCTGCAGCCAGTT
GGACGCTTGGGCGTGAACAAGAACATCGATAATTTCTTTGCGGAAAATGA
AATGCTTGCATTTAACCCTGGTATCGTGGTTCCTGGGATCTACTACTCAA
ATGATAAGATGCT
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