CN192213

Overview
NameCN192213
Unique NameCN192213
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length639
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192213 vs. ExPASy Swiss-Prot
Match: ASGX_PYRHO (Putative L-asparaginase OS=Pyrococcus horikoshii GN=PH0232 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.301e-12
Identity = 47/117 (40.17%), Postives = 60/117 (51.28%), Query Frame = -1
Query:  223 TVGCVVVDQEGRCAAATSTGGLMNKRTGRIGDSPLIGAGTYASNLCGVSCTGEGEAIIRATLARDVAAVMEYKGLCLQEAVDFVIK---ERLDEGQAGLIAVSKNGEVACGFNANGM 564
            TVG V  D E    A TSTGG+  K  GR+GD+P+IGAGTYA+ + G SCTG GE  IR  LA+     +   G+  Q A +  I    +   +   G+I V   G V    N   M
Sbjct:  175 TVGAVAFDGE-EIVAGTSTGGVFLKMFGRVGDTPIIGAGTYANEVAGASCTGLGEVAIRLALAKTATDFVRL-GMDAQAASNAAISLATKYFGKDTMGIIMVDAAGNVGFAKNTKHM 289          
BLAST of CN192213 vs. ExPASy Swiss-Prot
Match: ASGX_PYRKO (Putative L-asparaginase OS=Pyrococcus kodakaraensis GN=TK2246 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.699e-12
Identity = 46/117 (39.32%), Postives = 59/117 (50.43%), Query Frame = -1
Query:  223 TVGCVVVDQEGRCAAATSTGGLMNKRTGRIGDSPLIGAGTYASNLCGVSCTGEGEAIIRATLARDVAAVMEYKGLCLQEAVDFVIK---ERLDEGQAGLIAVSKNGEVACGFNANGM 564
            TVG V  D E    A TSTGG+  K  GR+GD+P+IG GTYA+ + G SCTG GE  I+  LA+  A  +   G+  Q A +  I    +       G+I V   G V    N   M
Sbjct:  176 TVGAVAFDGE-EVVAGTSTGGVFLKMFGRVGDTPIIGGGTYANEVAGASCTGLGEVAIKLALAKSAADFVRL-GMDAQTASEAAISLATKYFGPDTMGIIMVDAKGNVGFAKNTKHM 290          
BLAST of CN192213 vs. ExPASy Swiss-Prot
Match: ASGX_SYNY3 (Isoaspartyl peptidase/L-asparaginase OS=Synechocystis sp. (strain PCC 6803) GN=sll0422 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.101e-11
Identity = 46/109 (42.20%), Postives = 59/109 (54.13%), Query Frame = -1
Query:  241 TVGCVVVDQEGRCAAATSTGGLMNKRTGRIGDSPLIGAGTYASNLCGVSCTGEGEAIIRATLARDVAAVMEYKGLCLQEAVDFVIKERLDEG-QAGLIAVSKNGEVACG 564
            T+G V +D  G+ AA TSTGG   +R GR+ DS +  AG YA+   GVSCTG GE II   LA  V  +    G  L +A+   I E L+     G IA+   G +A G
Sbjct:  173 TIGVVALDANGKIAAGTSTGGKGLERIGRVSDSAM-PAGNYATRFAGVSCTGVGEDIINECLAAKV-VIRVKDGQNLAQAMAKSITEALENNTDLGAIALDHQGHIAWG 279          
BLAST of CN192213 vs. ExPASy Swiss-Prot
Match: ASPG_ELIMR (N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase OS=Elizabethkingia miricola PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.204e-11
Identity = 43/126 (34.13%), Postives = 66/126 (52.38%), Query Frame = -1
Query:  235 ETVGCVVVDQEGRCAAATSTGGLMNKRTGRIGDSPLIGAGTYASNLCG-VSCTGEGEAIIRATLARDVAAVMEY---KGLCLQEAVDFVIK------ERLDEGQAGLIAVSKNGE-----VACGFN 567
            +T+G + +D +G  + A +T G+  K  GR+GDSP+IGAG +  N  G  + TG GE +IR      V  +M          +EAV+ ++K      + L + Q G IA++K GE     +  GFN
Sbjct:  196 DTIGMIALDAQGNLSGACTTSGMAYKMHGRVGDSPIIGAGLFVDNEIGAATATGHGEEVIRTVGTHLVVELMNQGRTPQQACKEAVERIVKIVNRRGKNLKDIQVGFIALNKKGEYGAYCIQDGFN 321          
BLAST of CN192213 vs. ExPASy Swiss-Prot
Match: ASGX_ANASP (Isoaspartyl peptidase/L-asparaginase OS=Anabaena sp. (strain PCC 7120) GN=all3922 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.324e-11
Identity = 44/109 (40.37%), Postives = 60/109 (55.05%), Query Frame = -1
Query:  241 TVGCVVVDQEGRCAAATSTGGLMNKRTGRIGDSPLIGAGTYASNLCGVSCTGEGEAIIRATLARDVAAVMEYKGLCLQEAVDFVIKERLD-EGQAGLIAVSKNGEVACG 564
            T+G V +D  G+ A  TSTGG   +R GR+ DS +  AG YA++   VSCTG GE II   LA  +  +    GL LQ+++     E  D +   G IA+  NG +A G
Sbjct:  180 TIGVVALDTYGKLAVGTSTGGKGFERIGRVSDSAM-PAGNYATSYAAVSCTGIGEDIIDECLAPKI-VIRVTDGLSLQDSMQRSFAEAHDNKRDFGAIALDANGAIAWG 286          
The following BLAST results are available for this feature:
BLAST of CN192213 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
ASGX_PYRHO1.301e-1240.17Putative L-asparaginase OS=Pyrococcus horikoshii G... [more]
ASGX_PYRKO1.699e-1239.32Putative L-asparaginase OS=Pyrococcus kodakaraensi... [more]
ASGX_SYNY31.101e-1142.20Isoaspartyl peptidase/L-asparaginase OS=Synechocys... [more]
ASPG_ELIMR3.204e-1134.13N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase OS... [more]
ASGX_ANASP9.324e-1140.37Isoaspartyl peptidase/L-asparaginase OS=Anabaena s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006I14_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006I14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192213 ID=CN192213; Name=CN192213; organism=Citrus sinensis; type=EST; length=639bp
GAGGAATTGGGAGTCCATTTTATTATTTTATAATAAAGCATCATCATAAG
ACTGCGCCAAATCTACGACACGCTAGACATAACAACACTACACGAGGTGC
GGCAATCAACAGCACCAACATGAGTCATGACCAAAGCATTAACAGAGCTA
ACTAACAGTTAAAAAGATTTAAGGCCAAATGCCAACTTCCATGAACCCAT
CCTCGGTAGCACAACCCCTGAACATTCCATTAGCGTTGAAGCCACAAGCC
ACTTCCCCATTCTTCGACACCGCGATGAGTCCAGCTTGCCCTTCATCGAG
CCTCTCTTTAATCACAAAATCAACAGCCTCTTGCAGGCACAAGCCTTTGT
ACTCCATCACAGCCGCCACATCACGCGCCAAGGTCGCACGTATGATGGCC
TCCCCTTCTCCCGTGCATGAGACCCCACAAAGATTAGAGGCGTAGGTCCC
AGCACCAATAAGAGGCGAGTCACCGATTCTGCCGGTCCTCTTATTCATCA
GCCCTCCCGTTGACGTGGCTGCAGCGCACCGACCCTCCTGGTCAACCACA
ACGCACCCAACCGTTTCTGGGGCGTACAGGCTTATTGGAAGTCCGTTCAT
TTGCAAGGGGCTGTCTGTGGCTGCAGCTCCAGCGCTGCA
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