CN192198

Overview
NameCN192198
Unique NameCN192198
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length421
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192198 vs. ExPASy Swiss-Prot
Match: PGK_BACC4 (Phosphoglycerate kinase OS=Bacillus cereus (strain B4264) GN=pgk PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.810e-18
Identity = 45/73 (61.64%), Postives = 56/73 (76.71%), Query Frame = -3
Query:  201 EFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 419
            E   FA GT+A+ + LA+   +   ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  323 EMTPFAEGTKAVGQALAD--AEDTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393          
BLAST of CN192198 vs. ExPASy Swiss-Prot
Match: PGK_BACC2 (Phosphoglycerate kinase OS=Bacillus cereus (strain G9842) GN=pgk PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.810e-18
Identity = 45/73 (61.64%), Postives = 56/73 (76.71%), Query Frame = -3
Query:  201 EFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 419
            E   FA GT+A+ + LA+   +   ++IGGGDS AAVEK G+ADKMSHISTGGGASLE +EGK LPGV+ L+D
Sbjct:  323 EMTPFAEGTKAVGQALAD--AEDTYSVIGGGDSAAAVEKFGMADKMSHISTGGGASLEFMEGKELPGVVCLND 393          
BLAST of CN192198 vs. ExPASy Swiss-Prot
Match: PGK_OCEIH (Phosphoglycerate kinase OS=Oceanobacillus iheyensis GN=pgk PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.282e-18
Identity = 45/73 (61.64%), Postives = 56/73 (76.71%), Query Frame = -3
Query:  201 EFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 419
            E + FA GT+A+A+ LA   G    +IIGGGDS AAVEK GLA++M H+STGGGASLE +EGK LPG+ AL+D
Sbjct:  323 ELNAFAGGTKAVAEALASTEGY---SIIGGGDSAAAVEKFGLAEEMDHVSTGGGASLEFMEGKVLPGLAALND 392          
BLAST of CN192198 vs. ExPASy Swiss-Prot
Match: PGK_NEUCR (Phosphoglycerate kinase OS=Neurospora crassa GN=pgk-1 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 6.282e-18
Identity = 43/73 (58.90%), Postives = 53/73 (72.60%), Query Frame = -3
Query:  201 EFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 419
            EFDKFA GT+A      + + +G T IIGGGD+     K G+ DK+SH+STGGGASLELLEGK LPGV+AL +
Sbjct:  344 EFDKFAKGTKATLDACVKAAEEGRTVIIGGGDTATVAAKYGVEDKLSHVSTGGGASLELLEGKALPGVVALSE 416          
BLAST of CN192198 vs. ExPASy Swiss-Prot
Match: PGK_CAEEL (Probable phosphoglycerate kinase OS=Caenorhabditis elegans GN=pgk-1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.282e-18
Identity = 43/74 (58.11%), Postives = 54/74 (72.97%), Query Frame = -3
Query:  198 EFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 419
            EFDKFA GT+++  ++ + +  G  TIIGGGD+  A +K    DK+SH+STGGGASLELLEGK LPGV AL  A
Sbjct:  343 EFDKFATGTKSLMDEVVKATAAGAITIIGGGDTATAAKKYNTEDKVSHVSTGGGASLELLEGKVLPGVDALSPA 416          
BLAST of CN192198 vs. ExPASy Swiss-Prot
Match: PGK_BEUC1 (Phosphoglycerate kinase OS=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) GN=pgk PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.282e-18
Identity = 45/74 (60.81%), Postives = 54/74 (72.97%), Query Frame = -3
Query:  201 EFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADK-MSHISTGGGASLELLEGKTLPGVLALDD 419
            EFD FAAGT A+A+ L + +  G  TI+GGGDS AAV  +G  +   SHISTGGGASLE LEGKTLPG+  L+D
Sbjct:  326 EFDAFAAGTRAVAQGLTDATAAGAFTIVGGGDSAAAVRSLGFDEAGFSHISTGGGASLEFLEGKTLPGLAVLED 399          
BLAST of CN192198 vs. ExPASy Swiss-Prot
Match: PGK_SYMTH (Phosphoglycerate kinase OS=Symbiobacterium thermophilum GN=pgk PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.204e-18
Identity = 45/71 (63.38%), Postives = 54/71 (76.06%), Query Frame = -3
Query:  207 EFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 419
            E + FA GT A+A+ +A+  G    TI+GGGDSVAAVE  GLAD+M+H+STGGGASLE LEGK LPGV  L
Sbjct:  321 EMEPFARGTFAVAQAMADCEG---VTIVGGGDSVAAVEAAGLADRMTHVSTGGGASLEFLEGKELPGVACL 388          
BLAST of CN192198 vs. ExPASy Swiss-Prot
Match: PGK_SCHMA (Phosphoglycerate kinase OS=Schistosoma mansoni GN=PGK PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.204e-18
Identity = 44/74 (59.46%), Postives = 53/74 (71.62%), Query Frame = -3
Query:  198 EFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 419
            E DKFA GT+A   ++ + +  G TTIIGGGD+     K    DK+SH+STGGGASLELLEGK LPGV+AL DA
Sbjct:  342 EMDKFATGTKAAMDEVVKATKNGATTIIGGGDTATCCAKWDTEDKVSHVSTGGGASLELLEGKQLPGVVALTDA 415          
BLAST of CN192198 vs. ExPASy Swiss-Prot
Match: PGK_PORGI (Phosphoglycerate kinase OS=Porphyromonas gingivalis GN=pgk PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.204e-18
Identity = 39/71 (54.93%), Postives = 55/71 (77.46%), Query Frame = -3
Query:  207 EFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLAL 419
            EFD F+ G++A+ + + E +  G  +++GGGDSVA V K GLADK+S++STGGGA LE +EGKTLPG+ A+
Sbjct:  346 EFDNFSIGSKAVGEAIVEATANGAFSLVGGGDSVACVNKFGLADKVSYVSTGGGALLEAIEGKTLPGIAAI 416          
BLAST of CN192198 vs. ExPASy Swiss-Prot
Match: PGK_LACS1 (Phosphoglycerate kinase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=pgk PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.204e-18
Identity = 45/73 (61.64%), Postives = 55/73 (75.34%), Query Frame = -3
Query:  201 EFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 419
            E   FA GT  + K L  LS    TTI+GGGDS AAV+++G+ADK++HISTGGGASLE LEGKTLPG+ A+ D
Sbjct:  329 EMSNFAKGTLEVGKFLGTLSD--ATTIVGGGDSTAAVQQLGVADKLTHISTGGGASLEYLEGKTLPGIAAVSD 399          
The following BLAST results are available for this feature:
BLAST of CN192198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_BACC44.810e-1861.64Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACC24.810e-1861.64Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_OCEIH6.282e-1861.64Phosphoglycerate kinase OS=Oceanobacillus iheyensi... [more]
PGK_NEUCR6.282e-1858.90Phosphoglycerate kinase OS=Neurospora crassa GN=pg... [more]
PGK_CAEEL6.282e-1858.11Probable phosphoglycerate kinase OS=Caenorhabditis... [more]
PGK_BEUC16.282e-1860.81Phosphoglycerate kinase OS=Beutenbergia cavernae (... [more]
PGK_SYMTH8.204e-1863.38Phosphoglycerate kinase OS=Symbiobacterium thermop... [more]
PGK_SCHMA8.204e-1859.46Phosphoglycerate kinase OS=Schistosoma mansoni GN=... [more]
PGK_PORGI8.204e-1854.93Phosphoglycerate kinase OS=Porphyromonas gingivali... [more]
PGK_LACS18.204e-1861.64Phosphoglycerate kinase OS=Lactobacillus salivariu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006I06_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006I06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192198 ID=CN192198; Name=CN192198; organism=Citrus sinensis; type=EST; length=421bp
TTTTTTTTTTTTTTTTTCCAAAAAAATGCATCACCATTGATGCCTGTGAA
AAAAAATTTATTTTTACTCTTACAGCATCTACAAAACCAACTCTAATGAT
AAAGTTTAACTTTTATCCACTCTGGGCTGACAACCAGCCACACATACAAC
TCTGGAAATGGCACATTTAAAAAAGGAAAGTCCAGGAACTGGGTTTAAGC
ATCATCAAGAGCAAGCACACCAGGGAGTGTTTTGCCCTCAAGGAGCTCTA
AGCTGGCTCCACCTCCAGTGGAGATATGGCTCATCTTGTCAGCCAGACCA
ACCTTCTCTACGGCTGCAACTGAGTCACCTCCTCCAATGATTGTGGTCAC
TCCCTTCCCGCTGAGCTCCGCAAGCTTCTTGGCAATTGCCTCAGTGCCAG
CAGCAAATTTATCAAATTCAA
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