CN192193

Overview
NameCN192193
Unique NameCN192193
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192193 vs. ExPASy Swiss-Prot
Match: BIP2_ARATH (Luminal-binding protein 2 OS=Arabidopsis thaliana GN=At5g42020 PE=1 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 2.500e-50
Identity = 89/156 (57.05%), Postives = 129/156 (82.69%), Query Frame = -2
Query:  250 KFELSGIPPAPRGVPQITVAFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 714
            KF+L+G+PPAPRG PQI V F++DANGILNV AEDK +G+  KITITN+KGRLS++EI++MV+EAE++  ED++ K+K++A+NALE Y YNM+N V D +K+  KL+  +K+KIE A  +A++WLD NQ +E +E+++K+KE+E++CNPII  +YQ
Sbjct:  489 KFDLTGVPPAPRGTPQIEVTFEVDANGILNVKAEDKASGKSEKITITNEKGRLSQEEIDRMVKEAEEFAEEDKKVKEKIDARNALETYVYNMKNQVSDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQ 644          
BLAST of CN192193 vs. ExPASy Swiss-Prot
Match: BIP5_TOBAC (Luminal-binding protein 5 OS=Nicotiana tabacum GN=BIP5 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.265e-50
Identity = 89/156 (57.05%), Postives = 128/156 (82.05%), Query Frame = -2
Query:  250 KFELSGIPPAPRGVPQITVAFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 714
            KF+L+GI PAPRG PQI V F++DANGILNV AEDK +G+  KITITNDKGRLS++EIE+MV+EAE++  ED++ K++++A+N+LE Y YNMRN + D +K+  KL+  +K+KIE A  +A++WLD NQ AE +++++K+KE+E++CNPII  +YQ
Sbjct:  490 KFDLTGIAPAPRGTPQIEVTFEVDANGILNVKAEDKASGKSEKITITNDKGRLSQEEIERMVKEAEEFAEEDKKVKERIDARNSLETYVYNMRNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYDEKLKEVEAVCNPIITAVYQ 645          
BLAST of CN192193 vs. ExPASy Swiss-Prot
Match: HSP70_CLAHE (Heat shock 70 kDa protein OS=Cladosporium herbarum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.264e-50
Identity = 98/187 (52.41%), Postives = 128/187 (68.45%), Query Frame = -2
Query:  160 KFELSGIPPAPRGVPQITVAFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXGSAA--GPKIEEVD 714
            KFELSGI PAPRGVPQI V FD+DANGI+NVSA +K TG+ NKI ITNDKGRLSK+EIE+M+ +AEKYK EDE    +++AKN LE+YAY+++NTV D K+  KL   DK+ +  AID+ + W+D NQ A  +E+E + K+LES+ NP++ K+Y                     A   GP +EEVD
Sbjct:  457 KFELSGIRPAPRGVPQIEVTFDLDANGIMNVSALEKGTGKTNKIVITNDKGRLSKEEIERMLADAEKYKEEDEAEAGRIQAKNGLESYAYSLKNTVSDPKVEEKLSAEDKETLTGAIDKTVAWIDENQTATKEEYEAEQKQLESVANPVMMKIYGAEGGAPGGMPGQGAGAPPPGAGDDGPTVEEVD 643          
BLAST of CN192193 vs. ExPASy Swiss-Prot
Match: HSP70_THEAN (Heat shock 70 kDa protein OS=Theileria annulata GN=TA11610 PE=3 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 1.620e-49
Identity = 93/188 (49.47%), Postives = 132/188 (70.21%), Query Frame = -2
Query:  160 KFELSGIPPAPRGVPQITVAFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ---XXXXXXXXXXXXXXXXXXGSAAGPKIEEVD 714
            KF L+GI PAPRGVPQI V FDIDANGILNV+A DK+TG+   +TITNDKGRLS++EI++MV+EAEKYK EDE+ ++ VE+++ LENY Y+M+NT+ ++++  KL   +       I  A++W+++NQLAE DE+EDK+K +E +CNP++ K+YQ                       ++GP +EEVD
Sbjct:  459 KFHLTGIAPAPRGVPQIEVTFDIDANGILNVTAMDKSTGKSEHVTITNDKGRLSQEEIDRMVEEAEKYKEEDEKRRRCVESRHKLENYCYSMKNTLSEDQVKQKLGADEVDSALSTITDALKWVEANQLAEHDEYEDKLKHVEGVCNPLVTKLYQSGAAPGGPDMSGGFPGGAAPPPQSSGPTVEEVD 646          
BLAST of CN192193 vs. ExPASy Swiss-Prot
Match: HSP70_SCHMA (Heat shock 70 kDa protein homolog OS=Schistosoma mansoni PE=2 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 1.620e-49
Identity = 104/185 (56.22%), Postives = 128/185 (69.19%), Query Frame = -2
Query:  160 KFELSGIPPAPRGVPQITVAFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXGSAAGPKIEEVD 714
            KFELSGIPPAPRG PQI V FDIDANGILNVSA DK TG++NKITITNDKGRLSK+EIE+MV +A+KYKAEDE+ + +V AKN+LE+Y Y M+  V+ E +  K+  +D++ I    +  I WLD +Q AE  E+E K +ELE +C PII K+YQ                  GS  GP IEEVD
Sbjct:  456 KFELSGIPPAPRGTPQIEVTFDIDANGILNVSAVDKGTGKQNKITITNDKGRLSKEEIERMVADADKYKAEDEKQRDRVSAKNSLESYVYTMKQQVEGE-LKEKIPESDRQVIISKCEDTISWLDVHQSAEKHEYESKREELEKVCAPIITKVYQ--AGGMPGGMHEASGAGGGSGKGPTIEEVD 637          
BLAST of CN192193 vs. ExPASy Swiss-Prot
Match: HSP71_PICAN (Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 PE=1 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 2.764e-49
Identity = 98/188 (52.13%), Postives = 126/188 (67.02%), Query Frame = -2
Query:  160 KFELSGIPPAPRGVPQITVAFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXGSAA---GPKIEEVD 714
            KFELSGIPPAPRGVPQI V FDIDANGILNVSA +K TG+  KITITNDKGRLSK+EI++MV EAEKYK EDE+   ++ AKN LE+YAY+++ T  +++   K+D + ++ +  AI++ I WLD+NQ A  DE+EDK KELE I N  +  +Y                    +     GP +EEVD
Sbjct:  458 KFELSGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKSQKITITNDKGRLSKEEIDRMVAEAEKYKEEDEKEAARIAAKNGLESYAYSLKQTASEKQFEEKVDASKRESLNKAIEETISWLDNNQSATTDEYEDKRKELEGIANDALKDLYAAGGVPGGAAPGGFPGAGGAAPGADQGPSVEEVD 645          
BLAST of CN192193 vs. ExPASy Swiss-Prot
Match: HSP76_SAGOE (Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.714e-49
Identity = 93/185 (50.27%), Postives = 132/185 (71.35%), Query Frame = -2
Query:  160 KFELSGIPPAPRGVPQITVAFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXGSAAGPKIEEVD 714
            +FELSGIPPAPRGVPQI V FDIDANGIL+V+A D++TG+ NKITITNDKGRLSK+E+E+MV+EAE+YKAEDE  + +V AKN+LE + ++++ ++++E +  K+   D+ K++D   + + WL+ NQLA+ +E+E + +ELE IC PI +++Y                    S  GP IEEVD
Sbjct:  460 RFELSGIPPAPRGVPQIEVTFDIDANGILSVTATDRSTGKANKITITNDKGRLSKEEVERMVREAEQYKAEDEAQRDRVAAKNSLETHVFHVKGSLQEESLRDKIPKEDRHKVQDKCQEVLAWLEHNQLADKEEYEHQKRELEQICRPIFSRLYGGPGVPGGSSCGAQARQGDRS-TGPIIEEVD 643          
BLAST of CN192193 vs. ExPASy Swiss-Prot
Match: HSP76_HUMAN (Heat shock 70 kDa protein 6 OS=Homo sapiens GN=HSPA6 PE=1 SV=2)

HSP 1 Score: 194.126 bits (492), Expect = 6.157e-49
Identity = 94/185 (50.81%), Postives = 132/185 (71.35%), Query Frame = -2
Query:  160 KFELSGIPPAPRGVPQITVAFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXGSAAGPKIEEVD 714
            +FELSGIPPAPRGVPQI V FDIDANGIL+V+A D++TG+ NKITITNDKGRLSK+E+E+MV EAE+YKAEDE  + +V AKN+LE + ++++ ++++E +  K+   D++K++D   + + WL+ NQLAE +E+E + +ELE IC PI +++Y                    S  GP IEEVD
Sbjct:  460 RFELSGIPPAPRGVPQIEVTFDIDANGILSVTATDRSTGKANKITITNDKGRLSKEEVERMVHEAEQYKAEDEAQRDRVAAKNSLEAHVFHVKGSLQEESLRDKIPEEDRRKMQDKCREVLAWLEHNQLAEKEEYEHQKRELEQICRPIFSRLYGGPGVPGGSSCGTQARQGDPS-TGPIIEEVD 643          
BLAST of CN192193 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEEL (Heat shock 70 kDa protein C OS=Caenorhabditis elegans GN=hsp-3 PE=2 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.372e-48
Identity = 90/156 (57.69%), Postives = 126/156 (80.77%), Query Frame = -2
Query:  250 KFELSGIPPAPRGVPQITVAFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 714
            KF+L+G+PPAPRGVPQI V F+ID NGIL+V+AEDK TG KNKITITND+ RLS ++IE+M+ +AEK+  +D++ K K EA+N LE+YAYN++N ++D EK+G KLD  DKK IE+A+++AI WL SN  A A+E +++ K+LES   PI++K+Y+
Sbjct:  486 KFDLTGLPPAPRGVPQIEVTFEIDVNGILHVTAEDKGTGNKNKITITNDQNRLSPEDIERMINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKKTIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLYK 641          
BLAST of CN192193 vs. ExPASy Swiss-Prot
Match: HSP76_PIG (Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.372e-48
Identity = 93/185 (50.27%), Postives = 130/185 (70.27%), Query Frame = -2
Query:  160 KFELSGIPPAPRGVPQITVAFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXGSAAGPKIEEVD 714
            +FELSGIPPAPRGVPQI V FDIDANGIL+V+A D++TG+ NKITITNDKGRLSK+E+E+MV+EA++YK EDE  + +V AKN+LE Y ++++ ++ +E +  K+   D+ K++D   + + WL+ NQLAE +E+E + +ELE IC PI +++Y                    S  GP IEEVD
Sbjct:  460 RFELSGIPPAPRGVPQIEVTFDIDANGILSVTATDRSTGRANKITITNDKGRLSKEEVERMVREADEYKVEDEAQRDRVAAKNSLEAYVFHVKGSLHEESLRDKIPEEDRCKVQDKCQEVLTWLEHNQLAEKEEYEHQKRELEQICRPIFSRLYGAPGIPGGSSCGAQARQGAPS-TGPVIEEVD 643          
The following BLAST results are available for this feature:
BLAST of CN192193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BIP2_ARATH2.500e-5057.05Luminal-binding protein 2 OS=Arabidopsis thaliana ... [more]
BIP5_TOBAC3.265e-5057.05Luminal-binding protein 5 OS=Nicotiana tabacum GN=... [more]
HSP70_CLAHE4.264e-5052.41Heat shock 70 kDa protein OS=Cladosporium herbarum... [more]
HSP70_THEAN1.620e-4949.47Heat shock 70 kDa protein OS=Theileria annulata GN... [more]
HSP70_SCHMA1.620e-4956.22Heat shock 70 kDa protein homolog OS=Schistosoma m... [more]
HSP71_PICAN2.764e-4952.13Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 ... [more]
HSP76_SAGOE4.714e-4950.27Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN... [more]
HSP76_HUMAN6.157e-4950.81Heat shock 70 kDa protein 6 OS=Homo sapiens GN=HSP... [more]
HSP7C_CAEEL1.372e-4857.69Heat shock 70 kDa protein C OS=Caenorhabditis eleg... [more]
HSP76_PIG1.372e-4850.27Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006I03_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006I03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192193 ID=CN192193; Name=CN192193; organism=Citrus sinensis; type=EST; length=715bp
GAGGCCGAATTAAAAGTAAAATTTGAAAAATAAAAAGAAAAGGAAAAATT
AATATTCATCCTAAGGCTAAAGCAACATAAGATAAAAACCAAACGTCCAG
TTTTCCCACCGTCAAAAAACCGACCTCCCACAAACACAGCAAAATAAACT
GGAAGCTTAGTCAACTTCCTCAATCTTGGGACCGGCGGCACTGCCACCAG
CTGGAGGAGTATCATCATCCATGTCACCGCCCATATCACCACCAGCACCT
TGATACATCTTGGCAATGATGGGATTGCAGATGCTCTCAAGCTCCTTCAT
CTTGTCTTCAAATTCATCGGCCTCAGCCAGCTGGTTGCTATCAAGCCATT
GAATTGCCTGGTCAATGGCATCCTCAATCTTCTTCTTGTCAGCTGGATCA
AGTTTGGAGCCGATCTTCTCGTCCTTGACAGTGTTCCTCATATTGTAGGC
ATAGTTTTCCAAGGCATTCTTGGCCTCGACCTTCTTCTTGTGCTCCTCAT
CTTCAGCCTTGTACTTCTCGGCCTCTTGAACCATCTTCTCAATTTCATCC
TTTGACAATCTACCCTTGTCGTTGGTGATTGTGATCTTGTTCTTTTGGCC
GGTTGTCTTATCTTCTGCTGAGACATTCAAGATACCGTTAGCATCGATAT
CAAAAGCAACAGTGATCTGAGGAACCCCCCTGGGAGCTGGAGGAATGCCA
GAGAGCTCAAATTTG
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