CN192114
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN192114 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.209e-39 Identity = 79/172 (45.93%), Postives = 116/172 (67.44%), Query Frame = -3 Query: 198 STIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASI-----KNRMASQPASNN--ARPPTVQIRGQPVNQKSGCCST 692 STIGV+F RT++ +GKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+T +++F+NV++WL E+ +A N+ ++ GNK DL + VS E +A A++ G+ F+ETSA A N+E+AF + I K +A+Q AS+N + T+ + NQ+ CCST Sbjct: 43 STIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQEASSNLPGQGTTINVADASANQRRSCCST 214
BLAST of CN192114 vs. ExPASy Swiss-Prot
Match: RAB10_DISOM (Ras-related protein Rab-10 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.209e-39 Identity = 76/132 (57.58%), Postives = 100/132 (75.76%), Query Frame = -3 Query: 300 ISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASI 695 ISTIG+DFKI+TVE GK IKLQIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +SF N+ +WL ID +A+E+V ++L+GNKCD+ +VV + A E I F ETSAK+ N+E+AF+ +A I Sbjct: 39 ISTIGIDFKIKTVELHGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLAEDI 170
BLAST of CN192114 vs. ExPASy Swiss-Prot
Match: RAB26_RAT (Ras-related protein Rab-26 OS=Rattus norvegicus GN=Rab26 PE=2 SV=2) HSP 1 Score: 159.844 bits (403), Expect = 1.230e-38 Identity = 72/146 (49.32%), Postives = 104/146 (71.23%), Query Frame = -3 Query: 258 ISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNAR 695 IST+G+DF+ + ++ DG +KLQIWDTAGQERFR++T +YYR AH ++++YD+T+++SF+N++ WL EI YA ++V +L+GNK D T +VV E + A E G+PFMETSAKS NV+ AF A+A +K R P+ R Sbjct: 95 ISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQERVVKREDGEKLAKEYGLPFMETSAKSGLNVDLAFTAIAKELKQRSTKAPSEPRFR 240
BLAST of CN192114 vs. ExPASy Swiss-Prot
Match: SEC4_CANAL (Ras-related protein SEC4 OS=Candida albicans GN=SEC4 PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.606e-38 Identity = 73/135 (54.07%), Postives = 99/135 (73.33%), Query Frame = -3 Query: 291 ISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNR 695 I+TIG+DFKIRT+E GK IKLQ+WDTAGQERFRTIT++YYRGA GI+++YDVTD SF NV+ W + ++A+E+ LVGNKCD N+ VS E + A ++ +PF+E SAKS NV+ F +A+ I+ + Sbjct: 44 ITTIGIDFKIRTIESKGKRIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVGNKCDDEVNRQVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYELASIIQEK 178
BLAST of CN192114 vs. ExPASy Swiss-Prot
Match: RAB26_MOUSE (Ras-related protein Rab-26 OS=Mus musculus GN=Rab26 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.606e-38 Identity = 71/146 (48.63%), Postives = 106/146 (72.60%), Query Frame = -3 Query: 258 ISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNAR 695 IST+G+DF+ + ++ DG +KLQIWDTAGQERFR++T +YYR AH ++++YD+T+++SF+N++ WL EI YA ++V +L+GNK D T ++VV E + A E G+PFMETSA++ NV+ AF A+A +K R A P+ R Sbjct: 98 ISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQDRVVKREDGEKLAKEYGLPFMETSARTGLNVDLAFTAIAKELKQRSAKAPSEPRFR 243
BLAST of CN192114 vs. ExPASy Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.578e-38 Identity = 79/174 (45.40%), Postives = 115/174 (66.09%), Query Frame = -3 Query: 198 STIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASI-----KNRMASQPASNNARPP----TVQIRGQPVNQKSGCCST 692 STIGV+F RT++ +GKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+T +++F+NV++WL E+ +A N+ ++ GNK DL + VS + A +++ G+ F+ETSA ATN+E+AF + I K +A+Q A+ A P T+ + N K GCCST Sbjct: 43 STIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQEATAGASVPGQGTTINVADTSGNTKKGCCST 216
BLAST of CN192114 vs. ExPASy Swiss-Prot
Match: RABF1_DICDI (Ras-related protein RabF1 OS=Dictyostelium discoideum GN=rabF1-1 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.578e-38 Identity = 76/145 (52.41%), Postives = 103/145 (71.03%), Query Frame = -3 Query: 255 TIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARP 689 TIG++FKI+TV +GK IKLQIWDTAG++RFR + +S+YRG HG+I+VYDVTDQ SF NV W+ +I RYA+ENV K+++GNK DL + KVV A+ FAD + IPF E SAK + N+E+AF+++ NR+ P Sbjct: 39 TIGIEFKIKTVYIEGKPIKLQIWDTAGEKRFR-VHNSHYRGCHGVIIVYDVTDQRSFENVPSWIEDIRRYANENVIKIIIGNKNDLVSQKVVDPFLAQEFADSLDIPFKEISAKQSINIEEAFISLVKLCINRIEETSLKKTQSP 182
BLAST of CN192114 vs. ExPASy Swiss-Prot
Match: RAB3_CAEEL (Ras-related protein Rab-3 OS=Caenorhabditis elegans GN=rab-3 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.103e-38 Identity = 77/172 (44.77%), Postives = 113/172 (65.70%), Query Frame = -3 Query: 207 ISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQ---------PVNQKSGC 695 +ST+G+DFK++TV + K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN+V+ W +I Y+ EN +LVGNKCD+ + +VVS + + AD++G+ F ETSAK NV+ F + I ++M A + + P Q +GQ P Q+ C Sbjct: 52 VSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEIICDKM----AESLDKDPQQQPKGQKLEANPTQKPAQQQCNC 219
BLAST of CN192114 vs. ExPASy Swiss-Prot
Match: RAB10_RAT (Ras-related protein Rab-10 OS=Rattus norvegicus GN=Rab10 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.041e-37 Identity = 81/165 (49.09%), Postives = 109/165 (66.06%), Query Frame = -3 Query: 204 ISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASI-KNRMASQPASNNARPPTVQIRGQPVNQKSGCC 695 ISTI +DFKI+TVE GK IKLQIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +SF N+ +WL ID++A+E+V ++L+ NKCD+ +VV + A E I F ETSAK+ N+E+AF+ + I + +P S N + G KS CC Sbjct: 39 ISTIEIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDQHANEDVERMLLRNKCDMDHKRVVPKGKGEQIAREHRIRFFETSAKANINIEKAFLTLPEDILRKTPVKEPNSENV---DISSGGGVTGWKSKCC 200
BLAST of CN192114 vs. ExPASy Swiss-Prot
Match: RAB3_DROME (Ras-related protein Rab-3 OS=Drosophila melanogaster GN=Rab3 PE=1 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.360e-37 Identity = 68/137 (49.64%), Postives = 103/137 (75.18%), Query Frame = -3 Query: 285 ISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMA 695 +ST+G+DFK++TV + K +KLQIWDTAGQER+RTIT++YYRGA G I++YDVT+++SFN+V+ W+ +I Y+ +N +LVGNKCD+ +V+S+E + AD++G+ F ETSAK NV+ F + I ++M+ Sbjct: 51 VSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMS 187 The following BLAST results are available for this feature:
BLAST of CN192114 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN192114 ID=CN192114; Name=CN192114; organism=Citrus sinensis; type=EST; length=697bpback to top |